RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.86■□□□□ 0.61
CD28-203ENST00000458610 NPLOC4Q8TAT6 608 aa18.86■□□□□ 0.61
CD28-203ENST00000458610 IGDCC4Q8TDY8 1250 aa18.86■□□□□ 0.61
CD28-203ENST00000458610 TRERF1Q96PN7 1200 aa18.86■□□□□ 0.61
CD28-203ENST00000458610 NEK1Q96PY6 1258 aa18.86■□□□□ 0.61
CD28-203ENST00000458610 CCPG1Q9ULG6 757 aa18.86■□□□□ 0.61
CD28-203ENST00000458610 TAF6LQ9Y6J9 622 aa18.86■□□□□ 0.61
CD28-203ENST00000458610 ZNF536O15090 1300 aa18.85■□□□□ 0.61
CD28-203ENST00000458610 POTEFA5A3E0 1075 aa18.85■□□□□ 0.61
CD28-203ENST00000458610 DHX16O60231 1041 aaKnown RBP18.85■□□□□ 0.61
CD28-203ENST00000458610 SGPL1O95470 568 aa18.85■□□□□ 0.61
CD28-203ENST00000458610 GOLGA8HP0CJ92 632 aa18.85■□□□□ 0.61
CD28-203ENST00000458610 ALAS1P13196 640 aa18.85■□□□□ 0.61
CD28-203ENST00000458610 PRKAR2AP13861 404 aaKnown RBP18.85■□□□□ 0.61
CD28-203ENST00000458610 CCL14Q16627 93 aa18.85■□□□□ 0.61
CD28-203ENST00000458610 MAP3K21Q5TCX8 1036 aa18.85■□□□□ 0.61
CD28-203ENST00000458610 CHST3Q7LGC8 479 aa18.85■□□□□ 0.61
CD28-203ENST00000458610 AGBL1Q96MI9 1066 aa18.85■□□□□ 0.61
CD28-203ENST00000458610 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.85■□□□□ 0.61
CD28-203ENST00000458610 RNF146Q9NTX7 359 aa18.85■□□□□ 0.61
CD28-203ENST00000458610 EN2P19622 333 aaPredicted RBP18.84■□□□□ 0.61
CD28-203ENST00000458610 CACNB2Q08289 660 aaPredicted RBP18.84■□□□□ 0.61
CD28-203ENST00000458610 ZNF792Q3KQV3 632 aa18.84■□□□□ 0.61
CD28-203ENST00000458610 NFXL1Q6ZNB6 911 aa18.84■□□□□ 0.61
CD28-203ENST00000458610 RASGRP2Q7LDG7 609 aa18.84■□□□□ 0.61
CD28-203ENST00000458610 MSL3Q8N5Y2 521 aaKnown RBP18.84■□□□□ 0.61
CD28-203ENST00000458610 U2AF1L4Q8WU68 220 aaKnown RBP18.84■□□□□ 0.61
CD28-203ENST00000458610 DEFB118Q96PH6 123 aa18.84■□□□□ 0.61
CD28-203ENST00000458610 UBA5Q9GZZ9 404 aa18.84■□□□□ 0.61
CD28-203ENST00000458610 PAK6Q9NQU5 681 aaPredicted RBP18.84■□□□□ 0.61
CD28-203ENST00000458610 HOMER2Q9NSB8 354 aa18.84■□□□□ 0.61
CD28-203ENST00000458610 PARP14Q460N5 1801 aa18.84■□□□□ 0.61
CD28-203ENST00000458610 PFASO15067 1338 aa18.83■□□□□ 0.61
CD28-203ENST00000458610 WDR19Q8NEZ3 1342 aa18.83■□□□□ 0.61
CD28-203ENST00000458610 CCDC69A6NI79 296 aa18.83■□□□□ 0.6
CD28-203ENST00000458610 KLRF2D3W0D1 207 aa18.83■□□□□ 0.6
CD28-203ENST00000458610 TFRCP02786 760 aaKnown RBP18.83■□□□□ 0.6
CD28-203ENST00000458610 LIFRP42702 1097 aa18.83■□□□□ 0.6
CD28-203ENST00000458610 ANTXR2P58335 489 aa18.83■□□□□ 0.6
CD28-203ENST00000458610 SNAP25P60880 206 aa18.83■□□□□ 0.6
CD28-203ENST00000458610 TRAF1Q13077 416 aa18.83■□□□□ 0.6
CD28-203ENST00000458610 MAML3Q96JK9 1138 aa18.83■□□□□ 0.6
CD28-203ENST00000458610 MAP3K14Q99558 947 aa18.83■□□□□ 0.6
CD28-203ENST00000458610 NRBP1Q9UHY1 535 aa18.83■□□□□ 0.6
CD28-203ENST00000458610 MSCO60682 206 aa18.82■□□□□ 0.6
CD28-203ENST00000458610 DDAH1O94760 285 aa18.82■□□□□ 0.6
CD28-203ENST00000458610 PGK2P07205 417 aa18.82■□□□□ 0.6
CD28-203ENST00000458610 CALM1P0DP23 149 aa18.82■□□□□ 0.6
CD28-203ENST00000458610 CALM2P0DP24 149 aa18.82■□□□□ 0.6
CD28-203ENST00000458610 CALM3P0DP25 149 aa18.82■□□□□ 0.6
CD28-203ENST00000458610 KIF5BP33176 963 aa18.82■□□□□ 0.6
CD28-203ENST00000458610 HSPA4P34932 840 aa18.82■□□□□ 0.6
CD28-203ENST00000458610 TRIM32Q13049 653 aa18.82■□□□□ 0.6
CD28-203ENST00000458610 GRM4Q14833 912 aa18.82■□□□□ 0.6
CD28-203ENST00000458610 SYNE3Q6ZMZ3 975 aa18.82■□□□□ 0.6
CD28-203ENST00000458610 DHX32Q7L7V1 743 aaKnown RBP18.82■□□□□ 0.6
CD28-203ENST00000458610 ZNF467Q7Z7K2 595 aaPredicted RBP18.82■□□□□ 0.6
CD28-203ENST00000458610 ADGRF4Q8IZF3 695 aa18.82■□□□□ 0.6
CD28-203ENST00000458610 MAF1Q9H063 256 aa18.82■□□□□ 0.6
CD28-203ENST00000458610 FLRT1Q9NZU1 646 aa18.82■□□□□ 0.6
CD28-203ENST00000458610 DNAJC25-GNG10A0A024R161 153 aa18.81■□□□□ 0.6
CD28-203ENST00000458610 PALM3A6NDB9 673 aaPredicted RBP18.81■□□□□ 0.6
CD28-203ENST00000458610 POTEB2H3BUK9 544 aa18.81■□□□□ 0.6
CD28-203ENST00000458610 PSMA5P28066 241 aa18.81■□□□□ 0.6
CD28-203ENST00000458610 CYP2C19P33261 490 aa18.81■□□□□ 0.6
CD28-203ENST00000458610 GNAQP50148 359 aa18.81■□□□□ 0.6
CD28-203ENST00000458610 CTCFLQ8NI51 663 aaPredicted RBP18.81■□□□□ 0.6
CD28-203ENST00000458610 KCNB2Q92953 911 aa18.81■□□□□ 0.6
CD28-203ENST00000458610 LZTS2Q9BRK4 669 aa18.81■□□□□ 0.6
CD28-203ENST00000458610 TINF2Q9BSI4 451 aa18.81■□□□□ 0.6
CD28-203ENST00000458610 LY9Q9HBG7 655 aa18.81■□□□□ 0.6
CD28-203ENST00000458610 VAT1LQ9HCJ6 419 aa18.81■□□□□ 0.6
CD28-203ENST00000458610 PLXNB2O15031 1838 aa18.81■□□□□ 0.6
CD28-203ENST00000458610 ZNF236Q9UL36 1845 aa18.8■□□□□ 0.6
CD28-203ENST00000458610 SH2B2O14492 632 aaPredicted RBP18.8■□□□□ 0.6
CD28-203ENST00000458610 IGHA2P01877 340 aa18.8■□□□□ 0.6
CD28-203ENST00000458610 CNGA1P29973 690 aa18.8■□□□□ 0.6
CD28-203ENST00000458610 TROAPQ12815 778 aa18.8■□□□□ 0.6
CD28-203ENST00000458610 CDC37Q16543 378 aaPredicted RBP18.8■□□□□ 0.6
CD28-203ENST00000458610 RASEFQ8IZ41 740 aa18.8■□□□□ 0.6
CD28-203ENST00000458610 NUP133Q8WUM0 1156 aa18.8■□□□□ 0.6
CD28-203ENST00000458610 CRISPLD2Q9H0B8 497 aa18.8■□□□□ 0.6
CD28-203ENST00000458610 MAD2L2Q9UI95 211 aa18.8■□□□□ 0.6
CD28-203ENST00000458610 CNPY2Q9Y2B0 182 aa18.8■□□□□ 0.6
CD28-203ENST00000458610 SLC12A7Q9Y666 1083 aa18.8■□□□□ 0.6
CD28-203ENST00000458610 COL11A1P12107 1806 aaPredicted RBP18.79■□□□□ 0.6
CD28-203ENST00000458610 FGD1P98174 961 aa18.79■□□□□ 0.6
CD28-203ENST00000458610 EXOSC10Q01780 885 aaKnown RBP18.79■□□□□ 0.6
CD28-203ENST00000458610 NSMFQ6X4W1 530 aa18.79■□□□□ 0.6
CD28-203ENST00000458610 ZNF654Q8IZM8 581 aa18.79■□□□□ 0.6
CD28-203ENST00000458610 ANKLE1Q8NAG6 615 aa18.79■□□□□ 0.6
CD28-203ENST00000458610 JMJD4Q9H9V9 463 aa18.79■□□□□ 0.6
CD28-203ENST00000458610 A1CFQ9NQ94 594 aaKnown RBP18.79■□□□□ 0.6
CD28-203ENST00000458610 ABCB11O95342 1321 aa18.78■□□□□ 0.6
CD28-203ENST00000458610 SYNGAP1Q96PV0 1343 aa18.78■□□□□ 0.6
CD28-203ENST00000458610 SMARCA1P28370 1054 aa18.78■□□□□ 0.6
CD28-203ENST00000458610 CCND3P30281 292 aaPredicted RBP18.78■□□□□ 0.6
CD28-203ENST00000458610 BLOC1S2Q6QNY1 142 aa18.78■□□□□ 0.6
CD28-203ENST00000458610 MAMDC4Q6UXC1 1216 aa18.78■□□□□ 0.6
CD28-203ENST00000458610 SGMS1Q86VZ5 419 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms