RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 ASPRV1Q53RT3 343 aa27.12■■□□□ 1.93
CBX3-204ENST00000456948 CCDC174Q6PII3 467 aa27.12■■□□□ 1.93
CBX3-204ENST00000456948 IFIT3O14879 490 aaKnown RBP27.11■■□□□ 1.93
CBX3-204ENST00000456948 PARP1P09874 1014 aaKnown RBP27.11■■□□□ 1.93
CBX3-204ENST00000456948 CNGA1P29973 690 aa27.11■■□□□ 1.93
CBX3-204ENST00000456948 SLC16A2P36021 539 aa27.11■■□□□ 1.93
CBX3-204ENST00000456948 MSL3Q8N5Y2 521 aaKnown RBP27.11■■□□□ 1.93
CBX3-204ENST00000456948 ANKLE1Q8NAG6 615 aa27.11■■□□□ 1.93
CBX3-204ENST00000456948 SHISA4Q96DD7 197 aa27.11■■□□□ 1.93
CBX3-204ENST00000456948 MAML3Q96JK9 1138 aa27.11■■□□□ 1.93
CBX3-204ENST00000456948 CRISPLD2Q9H0B8 497 aa27.11■■□□□ 1.93
CBX3-204ENST00000456948 HOMER2Q9NSB8 354 aa27.11■■□□□ 1.93
CBX3-204ENST00000456948 FLRT1Q9NZU1 646 aa27.11■■□□□ 1.93
CBX3-204ENST00000456948 CCPG1Q9ULG6 757 aa27.11■■□□□ 1.93
CBX3-204ENST00000456948 ICAM1P05362 532 aa27.1■■□□□ 1.93
CBX3-204ENST00000456948 PGK2P07205 417 aa27.1■■□□□ 1.93
CBX3-204ENST00000456948 ALAS1P13196 640 aa27.1■■□□□ 1.93
CBX3-204ENST00000456948 CYP2C19P33261 490 aa27.1■■□□□ 1.93
CBX3-204ENST00000456948 TTBK2Q6IQ55 1244 aa27.1■■□□□ 1.93
CBX3-204ENST00000456948 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.1■■□□□ 1.93
CBX3-204ENST00000456948 TRERF1Q96PN7 1200 aa27.1■■□□□ 1.93
CBX3-204ENST00000456948 RANBP17Q9H2T7 1088 aaKnown RBP27.1■■□□□ 1.93
CBX3-204ENST00000456948 NRBP1Q9UHY1 535 aa27.1■■□□□ 1.93
CBX3-204ENST00000456948 FARP2O94887 1054 aaPredicted RBP27.09■■□□□ 1.93
CBX3-204ENST00000456948 ZNF792Q3KQV3 632 aa27.09■■□□□ 1.93
CBX3-204ENST00000456948 AGBL1Q96MI9 1066 aa27.09■■□□□ 1.93
CBX3-204ENST00000456948 HTATIP2Q9BUP3 242 aa27.09■■□□□ 1.93
CBX3-204ENST00000456948 RNF146Q9NTX7 359 aa27.09■■□□□ 1.93
CBX3-204ENST00000456948 WTAPQ15007 396 aa27.08■■□□□ 1.93
CBX3-204ENST00000456948 CYB5R4Q7L1T6 521 aa27.08■■□□□ 1.93
CBX3-204ENST00000456948 TINF2Q9BSI4 451 aa27.08■■□□□ 1.93
CBX3-204ENST00000456948 MTA3Q9BTC8 594 aa27.08■■□□□ 1.93
CBX3-204ENST00000456948 PFASO15067 1338 aa27.08■■□□□ 1.93
CBX3-204ENST00000456948 CCND3P30281 292 aaPredicted RBP27.07■■□□□ 1.92
CBX3-204ENST00000456948 MCM5P33992 734 aa27.07■■□□□ 1.92
CBX3-204ENST00000456948 CREB3L3Q68CJ9 461 aa27.07■■□□□ 1.92
CBX3-204ENST00000456948 RASGRP2Q7LDG7 609 aa27.07■■□□□ 1.92
CBX3-204ENST00000456948 CNPY2Q9Y2B0 182 aa27.07■■□□□ 1.92
CBX3-204ENST00000456948 ZNF536O15090 1300 aa27.07■■□□□ 1.92
CBX3-204ENST00000456948 SLC27A2O14975 620 aa27.06■■□□□ 1.92
CBX3-204ENST00000456948 DHX16O60231 1041 aaKnown RBP27.06■■□□□ 1.92
CBX3-204ENST00000456948 SNAP25P60880 206 aa27.06■■□□□ 1.92
CBX3-204ENST00000456948 NECTIN1Q15223 517 aa27.06■■□□□ 1.92
CBX3-204ENST00000456948 SEC23AQ15436 765 aa27.06■■□□□ 1.92
CBX3-204ENST00000456948 TMEM67Q5HYA8 995 aa27.06■■□□□ 1.92
CBX3-204ENST00000456948 ZNF467Q7Z7K2 595 aaPredicted RBP27.06■■□□□ 1.92
CBX3-204ENST00000456948 TMTC2Q8N394 836 aa27.06■■□□□ 1.92
CBX3-204ENST00000456948 DDX20Q9UHI6 824 aaKnown RBP27.06■■□□□ 1.92
CBX3-204ENST00000456948 OGDHLQ9ULD0 1010 aa27.06■■□□□ 1.92
CBX3-204ENST00000456948 POTEB2H3BUK9 544 aa27.05■■□□□ 1.92
CBX3-204ENST00000456948 GOLGA8HP0CJ92 632 aa27.05■■□□□ 1.92
CBX3-204ENST00000456948 NECAB2Q7Z6G3 386 aa27.05■■□□□ 1.92
CBX3-204ENST00000456948 CATIPQ7Z7H3 387 aa27.05■■□□□ 1.92
CBX3-204ENST00000456948 DNAJC25-GNG10A0A024R161 153 aa27.04■■□□□ 1.92
CBX3-204ENST00000456948 IGHA2P01877 340 aa27.04■■□□□ 1.92
CBX3-204ENST00000456948 CYBAP13498 195 aa27.04■■□□□ 1.92
CBX3-204ENST00000456948 SEPT4O43236 478 aa27.03■■□□□ 1.92
CBX3-204ENST00000456948 STOX1Q6ZVD7 989 aa27.03■■□□□ 1.92
CBX3-204ENST00000456948 MB21D2Q8IYB1 491 aaPredicted RBP27.03■■□□□ 1.92
CBX3-204ENST00000456948 WDR19Q8NEZ3 1342 aa27.03■■□□□ 1.92
CBX3-204ENST00000456948 DPF3Q92784 378 aa27.03■■□□□ 1.92
CBX3-204ENST00000456948 TMEM87BQ96K49 555 aa27.03■■□□□ 1.92
CBX3-204ENST00000456948 SYNGAP1Q96PV0 1343 aa27.03■■□□□ 1.92
CBX3-204ENST00000456948 UBA5Q9GZZ9 404 aa27.03■■□□□ 1.92
CBX3-204ENST00000456948 REC8O95072 547 aa27.02■■□□□ 1.92
CBX3-204ENST00000456948 KRT32Q14532 448 aa27.02■■□□□ 1.92
CBX3-204ENST00000456948 CHST3Q7LGC8 479 aa27.02■■□□□ 1.92
CBX3-204ENST00000456948 A1CFQ9NQ94 594 aaKnown RBP27.02■■□□□ 1.92
CBX3-204ENST00000456948 PLXNA1Q9UIW2 1896 aa27.02■■□□□ 1.92
CBX3-204ENST00000456948 TRAF1Q13077 416 aa27.01■■□□□ 1.91
CBX3-204ENST00000456948 LHX8Q68G74 356 aa27.01■■□□□ 1.91
CBX3-204ENST00000456948 MAMDC4Q6UXC1 1216 aa27.01■■□□□ 1.91
CBX3-204ENST00000456948 NSMFQ6X4W1 530 aa27.01■■□□□ 1.91
CBX3-204ENST00000456948 ARRDC4Q8NCT1 418 aa27.01■■□□□ 1.91
CBX3-204ENST00000456948 TAF6LQ9Y6J9 622 aa27.01■■□□□ 1.91
CBX3-204ENST00000456948 ASB14A6NK59 587 aa27■■□□□ 1.91
CBX3-204ENST00000456948 KLRF2D3W0D1 207 aa27■■□□□ 1.91
CBX3-204ENST00000456948 PRC1O43663 620 aa27■■□□□ 1.91
CBX3-204ENST00000456948 NFXL1Q6ZNB6 911 aa27■■□□□ 1.91
CBX3-204ENST00000456948 UBE2Q1Q7Z7E8 422 aa27■■□□□ 1.91
CBX3-204ENST00000456948 ADGRF4Q8IZF3 695 aa27■■□□□ 1.91
CBX3-204ENST00000456948 PAWRQ96IZ0 340 aaKnown RBP27■■□□□ 1.91
CBX3-204ENST00000456948 MAF1Q9H063 256 aa27■■□□□ 1.91
CBX3-204ENST00000456948 VAT1LQ9HCJ6 419 aa27■■□□□ 1.91
CBX3-204ENST00000456948 CDC37Q16543 378 aaPredicted RBP26.99■■□□□ 1.91
CBX3-204ENST00000456948 PRAMEF19Q5SWL8 479 aa26.99■■□□□ 1.91
CBX3-204ENST00000456948 IGDCC4Q8TDY8 1250 aa26.99■■□□□ 1.91
CBX3-204ENST00000456948 MPHOSPH6Q99547 160 aaKnown RBP26.99■■□□□ 1.91
CBX3-204ENST00000456948 ADD3Q9UEY8 706 aaKnown RBP26.99■■□□□ 1.91
CBX3-204ENST00000456948 CCDC69A6NI79 296 aa26.98■■□□□ 1.91
CBX3-204ENST00000456948 RARBP10826 455 aa26.98■■□□□ 1.91
CBX3-204ENST00000456948 KIF5BP33176 963 aa26.98■■□□□ 1.91
CBX3-204ENST00000456948 MUM1L1Q5H9M0 696 aa26.98■■□□□ 1.91
CBX3-204ENST00000456948 FAM133AQ8N9E0 248 aa26.98■■□□□ 1.91
CBX3-204ENST00000456948 TRPV1Q8NER1 839 aa26.98■■□□□ 1.91
CBX3-204ENST00000456948 NEK1Q96PY6 1258 aa26.98■■□□□ 1.91
CBX3-204ENST00000456948 ABHD16BQ9H3Z7 469 aa26.98■■□□□ 1.91
CBX3-204ENST00000456948 C11orf49Q9H6J7 331 aa26.98■■□□□ 1.91
CBX3-204ENST00000456948 CYP39A1Q9NYL5 469 aa26.98■■□□□ 1.91
CBX3-204ENST00000456948 PTPDC1A2A3K4 754 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms