RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 DHX16O60231 1041 aaKnown RBP16.37■□□□□ 0.21
TIMP1-205ENST00000456754 ADD1P35611 737 aaKnown RBP16.37■□□□□ 0.21
TIMP1-205ENST00000456754 METAP2P50579 478 aaKnown RBP eCLIP16.37■□□□□ 0.216e-10■□□□□ 10.7
TIMP1-205ENST00000456754 ST3GAL1Q11201 340 aa16.37■□□□□ 0.21
TIMP1-205ENST00000456754 CDC37Q16543 378 aaPredicted RBP16.37■□□□□ 0.21
TIMP1-205ENST00000456754 RTN1Q16799 776 aa16.37■□□□□ 0.21
TIMP1-205ENST00000456754 TMTC3Q6ZXV5 915 aa16.37■□□□□ 0.21
TIMP1-205ENST00000456754 HOMER1Q86YM7 354 aa16.37■□□□□ 0.21
TIMP1-205ENST00000456754 NECAB1Q8N987 351 aa16.37■□□□□ 0.21
TIMP1-205ENST00000456754 PIGSQ96S52 555 aa16.37■□□□□ 0.21
TIMP1-205ENST00000456754 ALDH8A1Q9H2A2 487 aaPredicted RBP16.37■□□□□ 0.21
TIMP1-205ENST00000456754 ZBED4O75132 1171 aa16.36■□□□□ 0.21
TIMP1-205ENST00000456754 ERCC3P19447 782 aa16.36■□□□□ 0.21
TIMP1-205ENST00000456754 STAT3P40763 770 aa16.36■□□□□ 0.21
TIMP1-205ENST00000456754 PSMC4P43686 418 aa16.36■□□□□ 0.21
TIMP1-205ENST00000456754 FUT2Q10981 343 aa16.36■□□□□ 0.21
TIMP1-205ENST00000456754 ME3Q16798 604 aa16.36■□□□□ 0.21
TIMP1-205ENST00000456754 QRICH1Q2TAL8 776 aa16.36■□□□□ 0.21
TIMP1-205ENST00000456754 WDR78Q5VTH9 848 aa16.36■□□□□ 0.21
TIMP1-205ENST00000456754 SNRNP48Q6IEG0 339 aaKnown RBP16.36■□□□□ 0.21
TIMP1-205ENST00000456754 SYNE3Q6ZMZ3 975 aa16.36■□□□□ 0.21
TIMP1-205ENST00000456754 RIOX1Q9H6W3 641 aa16.36■□□□□ 0.21
TIMP1-205ENST00000456754 HOMER2Q9NSB8 354 aa16.36■□□□□ 0.21
TIMP1-205ENST00000456754 CNTNAP5Q8WYK1 1306 aa16.36■□□□□ 0.21
TIMP1-205ENST00000456754 CALM1P0DP23 149 aa16.35■□□□□ 0.21
TIMP1-205ENST00000456754 CALM2P0DP24 149 aa16.35■□□□□ 0.21
TIMP1-205ENST00000456754 CALM3P0DP25 149 aa16.35■□□□□ 0.21
TIMP1-205ENST00000456754 SCRN1Q12765 414 aa16.35■□□□□ 0.21
TIMP1-205ENST00000456754 RABEP1Q15276 862 aa16.35■□□□□ 0.21
TIMP1-205ENST00000456754 USH1GQ495M9 461 aa16.35■□□□□ 0.21
TIMP1-205ENST00000456754 NOM1Q5C9Z4 860 aaKnown RBP16.35■□□□□ 0.21
TIMP1-205ENST00000456754 MUM1L1Q5H9M0 696 aa16.35■□□□□ 0.21
TIMP1-205ENST00000456754 NCAPG2Q86XI2 1143 aa16.35■□□□□ 0.21
TIMP1-205ENST00000456754 MB21D1Q8N884 522 aa16.35■□□□□ 0.21
TIMP1-205ENST00000456754 GTF3C2Q8WUA4 911 aaPredicted RBP16.35■□□□□ 0.21
TIMP1-205ENST00000456754 MTMR8Q96EF0 704 aa16.35■□□□□ 0.21
TIMP1-205ENST00000456754 MAP3K14Q99558 947 aa16.35■□□□□ 0.21
TIMP1-205ENST00000456754 GABRQQ9UN88 632 aa16.35■□□□□ 0.21
TIMP1-205ENST00000456754 NID2Q14112 1375 aa16.35■□□□□ 0.21
TIMP1-205ENST00000456754 ZNFX1Q9P2E3 1918 aaKnown RBP16.35■□□□□ 0.21
TIMP1-205ENST00000456754 KIF5BP33176 963 aa16.34■□□□□ 0.21
TIMP1-205ENST00000456754 GPR142Q7Z601 462 aa16.34■□□□□ 0.21
TIMP1-205ENST00000456754 RIOX2Q8IUF8 465 aa16.34■□□□□ 0.21
TIMP1-205ENST00000456754 TEX13BQ9BXU2 312 aa16.34■□□□□ 0.21
TIMP1-205ENST00000456754 CCPG1Q9ULG6 757 aa16.34■□□□□ 0.21
TIMP1-205ENST00000456754 CTDP1Q9Y5B0 961 aaPredicted RBP16.34■□□□□ 0.21
TIMP1-205ENST00000456754 LCTP09848 1927 aa16.33■□□□□ 0.21
TIMP1-205ENST00000456754 FMNL1O95466 1100 aaPredicted RBP16.33■□□□□ 0.2
TIMP1-205ENST00000456754 ICAM1P05362 532 aa16.33■□□□□ 0.2
TIMP1-205ENST00000456754 ALAS1P13196 640 aa16.33■□□□□ 0.2
TIMP1-205ENST00000456754 NTRK3Q16288 839 aa16.33■□□□□ 0.2
TIMP1-205ENST00000456754 PHKBQ93100 1093 aa16.33■□□□□ 0.2
TIMP1-205ENST00000456754 ZNF274Q96GC6 653 aaPredicted RBP16.33■□□□□ 0.2
TIMP1-205ENST00000456754 ERO1AQ96HE7 468 aa16.33■□□□□ 0.2
TIMP1-205ENST00000456754 TNPO2O14787 897 aaKnown RBP16.32■□□□□ 0.2
TIMP1-205ENST00000456754 ATP2A1O14983 1001 aa16.32■□□□□ 0.2
TIMP1-205ENST00000456754 PFKFB2O60825 505 aa16.32■□□□□ 0.2
TIMP1-205ENST00000456754 CTDNEP1O95476 244 aa16.32■□□□□ 0.2
TIMP1-205ENST00000456754 FCGRTP55899 365 aa16.32■□□□□ 0.2
TIMP1-205ENST00000456754 PRKCZQ05513 592 aa16.32■□□□□ 0.2
TIMP1-205ENST00000456754 OTOP1Q7RTM1 612 aa16.32■□□□□ 0.2
TIMP1-205ENST00000456754 CLEC4DQ8WXI8 215 aa16.32■□□□□ 0.2
TIMP1-205ENST00000456754 COA7Q96BR5 231 aa16.32■□□□□ 0.2
TIMP1-205ENST00000456754 PURBQ96QR8 312 aaKnown RBP16.32■□□□□ 0.2
TIMP1-205ENST00000456754 SPZ1Q9BXG8 430 aa16.32■□□□□ 0.2
TIMP1-205ENST00000456754 SLKQ9H2G2 1235 aaPredicted RBP16.32■□□□□ 0.2
TIMP1-205ENST00000456754 RNF146Q9NTX7 359 aa16.32■□□□□ 0.2
TIMP1-205ENST00000456754 RBM28Q9NW13 759 aaKnown RBP16.32■□□□□ 0.2
TIMP1-205ENST00000456754 TRIM17Q9Y577 477 aa16.32■□□□□ 0.2
TIMP1-205ENST00000456754 NFIBO00712 420 aa16.31■□□□□ 0.2
TIMP1-205ENST00000456754 ZBTB5O15062 677 aa16.31■□□□□ 0.2
TIMP1-205ENST00000456754 PGK2P07205 417 aa16.31■□□□□ 0.2
TIMP1-205ENST00000456754 RCAN1P53805 252 aa16.31■□□□□ 0.2
TIMP1-205ENST00000456754 OAZ1P54368 228 aa16.31■□□□□ 0.2
TIMP1-205ENST00000456754 CCNA1P78396 465 aa16.31■□□□□ 0.2
TIMP1-205ENST00000456754 ANKRD1Q15327 319 aa16.31■□□□□ 0.2
TIMP1-205ENST00000456754 PLEKHH3Q7Z736 793 aa16.31■□□□□ 0.2
TIMP1-205ENST00000456754 TBC1D5Q92609 795 aa16.31■□□□□ 0.2
TIMP1-205ENST00000456754 GPKOWQ92917 476 aaPredicted RBP eCLIP16.31■□□□□ 0.2
TIMP1-205ENST00000456754 TRERF1Q96PN7 1200 aa16.31■□□□□ 0.2
TIMP1-205ENST00000456754 GJD2Q9UKL4 321 aa16.31■□□□□ 0.2
TIMP1-205ENST00000456754 V9GY48 417 aaPredicted RBP16.31■□□□□ 0.2
TIMP1-205ENST00000456754 OPLAHO14841 1288 aa16.3■□□□□ 0.2
TIMP1-205ENST00000456754 MAPK4P31152 587 aa16.3■□□□□ 0.2
TIMP1-205ENST00000456754 GNAQP50148 359 aa16.3■□□□□ 0.2
TIMP1-205ENST00000456754 KIF22Q14807 665 aa16.3■□□□□ 0.2
TIMP1-205ENST00000456754 FBXO11Q86XK2 927 aa16.3■□□□□ 0.2
TIMP1-205ENST00000456754 CCAR1Q8IX12 1150 aaKnown RBP16.3■□□□□ 0.2
TIMP1-205ENST00000456754 SHCBP1Q8NEM2 672 aa16.3■□□□□ 0.2
TIMP1-205ENST00000456754 SHISA4Q96DD7 197 aa16.3■□□□□ 0.2
TIMP1-205ENST00000456754 RRP36Q96EU6 259 aaKnown RBP16.3■□□□□ 0.2
TIMP1-205ENST00000456754 LZTS2Q9BRK4 669 aa16.3■□□□□ 0.2
TIMP1-205ENST00000456754 LIMCH1Q9UPQ0 1083 aa16.3■□□□□ 0.2
TIMP1-205ENST00000456754 DDX49Q9Y6V7 483 aaKnown RBP16.3■□□□□ 0.2
TIMP1-205ENST00000456754 PLXNA1Q9UIW2 1896 aa16.29■□□□□ 0.2
TIMP1-205ENST00000456754 RBBP6Q7Z6E9 1792 aaKnown RBP16.29■□□□□ 0.2
TIMP1-205ENST00000456754 PNMA6FA0A0J9YX94 578 aa16.29■□□□□ 0.2
TIMP1-205ENST00000456754 ADAMTS3O15072 1205 aa16.29■□□□□ 0.2
TIMP1-205ENST00000456754 JAK2O60674 1132 aa16.29■□□□□ 0.2
TIMP1-205ENST00000456754 COBLO75128 1261 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms