RNA–Protein interactions for RNA: ENST00000455624.6

SCN5A-210, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 7,170 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-210ENST00000455624 MYL7Q01449 175 aa11.1□□□□□ -0.63
SCN5A-210ENST00000455624 PDE1CQ14123 709 aaPredicted RBP11.1□□□□□ -0.63
SCN5A-210ENST00000455624 TRMT44Q8IYL2 757 aaKnown RBP11.1□□□□□ -0.63
SCN5A-210ENST00000455624 NLRC4Q9NPP4 1024 aa11.1□□□□□ -0.63
SCN5A-210ENST00000455624 NDUFB9Q9Y6M9 179 aa11.1□□□□□ -0.63
SCN5A-210ENST00000455624 CCND2P30279 289 aa11.1□□□□□ -0.63
SCN5A-210ENST00000455624 STAT1P42224 750 aa11.1□□□□□ -0.63
SCN5A-210ENST00000455624 CLNS1AP54105 237 aaKnown RBP11.1□□□□□ -0.63
SCN5A-210ENST00000455624 IRX4P78413 519 aa11.1□□□□□ -0.63
SCN5A-210ENST00000455624 SF3A3Q12874 501 aaKnown RBP eCLIP11.1□□□□□ -0.63
SCN5A-210ENST00000455624 KRT26Q7Z3Y9 468 aa11.1□□□□□ -0.63
SCN5A-210ENST00000455624 STK38LQ9Y2H1 464 aa11.1□□□□□ -0.63
SCN5A-210ENST00000455624 PIK3C2GO75747 1445 aa11.09□□□□□ -0.63
SCN5A-210ENST00000455624 RGS16O15492 202 aaPredicted RBP11.09□□□□□ -0.63
SCN5A-210ENST00000455624 ATF2P15336 505 aa11.09□□□□□ -0.63
SCN5A-210ENST00000455624 INPP1P49441 399 aa11.09□□□□□ -0.63
SCN5A-210ENST00000455624 COG7P83436 770 aa11.09□□□□□ -0.63
SCN5A-210ENST00000455624 ARMCX5Q6P1M9 558 aa11.09□□□□□ -0.63
SCN5A-210ENST00000455624 DPP9Q86TI2 863 aa11.09□□□□□ -0.63
SCN5A-210ENST00000455624 LGR6Q9HBX8 967 aa11.09□□□□□ -0.63
SCN5A-210ENST00000455624 DLATP10515 647 aaKnown RBP11.09□□□□□ -0.63
SCN5A-210ENST00000455624 LRGUKQ96M69 825 aa11.09□□□□□ -0.63
SCN5A-210ENST00000455624 ZMYM6O95789 1325 aa11.09□□□□□ -0.63
SCN5A-210ENST00000455624 ZNF608Q9ULD9 1512 aaPredicted RBP11.09□□□□□ -0.63
SCN5A-210ENST00000455624 PPFIA4O75335 1185 aa11.09□□□□□ -0.63
SCN5A-210ENST00000455624 CSPG5O95196 566 aa11.09□□□□□ -0.63
SCN5A-210ENST00000455624 STMN1P16949 149 aa11.09□□□□□ -0.63
SCN5A-210ENST00000455624 ZNF449Q6P9G9 518 aa11.09□□□□□ -0.63
SCN5A-210ENST00000455624 CDC37L1Q7L3B6 337 aa11.09□□□□□ -0.63
SCN5A-210ENST00000455624 VCX3AQ9NNX9 186 aa11.09□□□□□ -0.63
SCN5A-210ENST00000455624 PNMA2Q9UL42 364 aa11.09□□□□□ -0.63
SCN5A-210ENST00000455624 TRIM37O94972 964 aa11.09□□□□□ -0.63
SCN5A-210ENST00000455624 RFC1P35251 1148 aaPredicted RBP11.09□□□□□ -0.63
SCN5A-210ENST00000455624 GUCY2FP51841 1108 aa11.09□□□□□ -0.63
SCN5A-210ENST00000455624 PARD3Q8TEW0 1356 aa11.09□□□□□ -0.63
SCN5A-210ENST00000455624 ABCC10Q5T3U5 1492 aa11.09□□□□□ -0.63
SCN5A-210ENST00000455624 LRRIQ4A6NIV6 560 aa11.09□□□□□ -0.63
SCN5A-210ENST00000455624 KRIT1O00522 736 aa11.09□□□□□ -0.63
SCN5A-210ENST00000455624 PLXNC1O60486 1568 aa11.09□□□□□ -0.63
SCN5A-210ENST00000455624 RNF40O75150 1001 aa11.09□□□□□ -0.63
SCN5A-210ENST00000455624 HOXB7P09629 217 aa11.09□□□□□ -0.63
SCN5A-210ENST00000455624 IL1RL1Q01638 556 aa11.09□□□□□ -0.63
SCN5A-210ENST00000455624 TTBK2Q6IQ55 1244 aa11.09□□□□□ -0.63
SCN5A-210ENST00000455624 DISC1Q9NRI5 854 aa11.09□□□□□ -0.63
SCN5A-210ENST00000455624 CPSF2Q9P2I0 782 aaKnown RBP11.09□□□□□ -0.63
SCN5A-210ENST00000455624 PCDHB4Q9Y5E5 795 aa11.09□□□□□ -0.63
SCN5A-210ENST00000455624 KCNK3O14649 394 aa11.08□□□□□ -0.63
SCN5A-210ENST00000455624 BUB1O43683 1085 aa11.08□□□□□ -0.63
SCN5A-210ENST00000455624 STAMQ92783 540 aa11.08□□□□□ -0.63
SCN5A-210ENST00000455624 SNX25Q9H3E2 840 aa11.08□□□□□ -0.63
SCN5A-210ENST00000455624 TYW1Q9NV66 732 aaKnown RBP11.08□□□□□ -0.63
SCN5A-210ENST00000455624 WDR17Q8IZU2 1322 aa11.08□□□□□ -0.64
SCN5A-210ENST00000455624 ZBTB7BO15156 539 aaPredicted RBP11.08□□□□□ -0.64
SCN5A-210ENST00000455624 RASSF4Q9H2L5 321 aa11.08□□□□□ -0.64
SCN5A-210ENST00000455624 BZW2Q9Y6E2 419 aaKnown RBP11.08□□□□□ -0.64
SCN5A-210ENST00000455624 ARHGAP25P42331 645 aa11.08□□□□□ -0.64
SCN5A-210ENST00000455624 RASSF2P50749 326 aa11.08□□□□□ -0.64
SCN5A-210ENST00000455624 CAPN12Q6ZSI9 719 aa11.08□□□□□ -0.64
SCN5A-210ENST00000455624 DNAJC10Q8IXB1 793 aa11.08□□□□□ -0.64
SCN5A-210ENST00000455624 ZNF654Q8IZM8 581 aa11.08□□□□□ -0.64
SCN5A-210ENST00000455624 CMTR1Q8N1G2 835 aaKnown RBP11.08□□□□□ -0.64
SCN5A-210ENST00000455624 SDCCAG3Q96C92 435 aa11.08□□□□□ -0.64
SCN5A-210ENST00000455624 BAG5Q9UL15 447 aa11.08□□□□□ -0.64
SCN5A-210ENST00000455624 XPOTO43592 962 aaKnown RBP11.08□□□□□ -0.64
SCN5A-210ENST00000455624 DDAH1O94760 285 aa11.08□□□□□ -0.64
SCN5A-210ENST00000455624 RLBP1P12271 317 aa11.08□□□□□ -0.64
SCN5A-210ENST00000455624 CTNNA1P35221 906 aaKnown RBP11.08□□□□□ -0.64
SCN5A-210ENST00000455624 DBN1Q16643 649 aa11.08□□□□□ -0.64
SCN5A-210ENST00000455624 MMEL1Q495T6 779 aa11.08□□□□□ -0.64
SCN5A-210ENST00000455624 BBS5Q8N3I7 341 aa11.08□□□□□ -0.64
SCN5A-210ENST00000455624 MED23Q9ULK4 1368 aa11.08□□□□□ -0.64
SCN5A-210ENST00000455624 ICA1Q05084 483 aa11.08□□□□□ -0.64
SCN5A-210ENST00000455624 BFSP1Q12934 665 aa11.08□□□□□ -0.64
SCN5A-210ENST00000455624 CCDC84Q86UT8 332 aaPredicted RBP11.08□□□□□ -0.64
SCN5A-210ENST00000455624 TAB3Q8N5C8 712 aaPredicted RBP11.08□□□□□ -0.64
SCN5A-210ENST00000455624 GOLGA8KD6RF30 607 aa11.08□□□□□ -0.64
SCN5A-210ENST00000455624 H7C0C1 242 aa11.08□□□□□ -0.64
SCN5A-210ENST00000455624 MGEA5O60502 916 aa11.08□□□□□ -0.64
SCN5A-210ENST00000455624 ATXN8OSP0DMR3 200 aa11.08□□□□□ -0.64
SCN5A-210ENST00000455624 ATP5OP48047 213 aa11.08□□□□□ -0.64
SCN5A-210ENST00000455624 CCDC93Q567U6 631 aa11.08□□□□□ -0.64
SCN5A-210ENST00000455624 RAPH1Q70E73 1250 aa11.08□□□□□ -0.64
SCN5A-210ENST00000455624 UBN1Q9NPG3 1134 aa11.08□□□□□ -0.64
SCN5A-210ENST00000455624 ERVV-2B6SEH9 535 aa11.07□□□□□ -0.64
SCN5A-210ENST00000455624 ABCB5Q2M3G0 1257 aa11.07□□□□□ -0.64
SCN5A-210ENST00000455624 RETREG2Q8NC44 543 aa11.07□□□□□ -0.64
SCN5A-210ENST00000455624 THAP12O43422 761 aa11.07□□□□□ -0.64
SCN5A-210ENST00000455624 LRRC43Q8N309 656 aa11.07□□□□□ -0.64
SCN5A-210ENST00000455624 PI4K2BQ8TCG2 481 aa11.07□□□□□ -0.64
SCN5A-210ENST00000455624 DDX17Q92841 729 aaKnown RBP11.07□□□□□ -0.64
SCN5A-210ENST00000455624 NFE2L3Q9Y4A8 694 aa11.07□□□□□ -0.64
SCN5A-210ENST00000455624 SPDYE2BA6NHP3 402 aa11.07□□□□□ -0.64
SCN5A-210ENST00000455624 ARHGAP6O43182 974 aa11.07□□□□□ -0.64
SCN5A-210ENST00000455624 OR52Z1P0C646 297 aa11.07□□□□□ -0.64
SCN5A-210ENST00000455624 SPDYE6P0CI01 402 aa11.07□□□□□ -0.64
SCN5A-210ENST00000455624 CCNA1P78396 465 aa11.07□□□□□ -0.64
SCN5A-210ENST00000455624 MUM1Q2TAK8 710 aa11.07□□□□□ -0.64
SCN5A-210ENST00000455624 GPKOWQ92917 476 aaPredicted RBP eCLIP11.07□□□□□ -0.64
SCN5A-210ENST00000455624 CCDC51Q96ER9 411 aa11.07□□□□□ -0.64
SCN5A-210ENST00000455624 MFAP3P55082 362 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms