RNA–Protein interactions for RNA: ENST00000455069.1

HDAC9-217, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-217ENST00000455069 AGBL1Q96MI9 1066 aa13.27□□□□□ -0.29
HDAC9-217ENST00000455069 UBAC1Q9BSL1 405 aa13.27□□□□□ -0.29
HDAC9-217ENST00000455069 RNF208Q9H0X6 261 aa13.27□□□□□ -0.29
HDAC9-217ENST00000455069 RANBP17Q9H2T7 1088 aaKnown RBP13.27□□□□□ -0.29
HDAC9-217ENST00000455069 CPVLQ9H3G5 476 aa13.27□□□□□ -0.29
HDAC9-217ENST00000455069 GPCPD1Q9NPB8 672 aa13.27□□□□□ -0.29
HDAC9-217ENST00000455069 PAK6Q9NQU5 681 aaPredicted RBP13.27□□□□□ -0.29
HDAC9-217ENST00000455069 PGK2P07205 417 aa13.26□□□□□ -0.29
HDAC9-217ENST00000455069 GJB1P08034 283 aa13.26□□□□□ -0.29
HDAC9-217ENST00000455069 FCER1AP12319 257 aa13.26□□□□□ -0.29
HDAC9-217ENST00000455069 PRKAR2AP13861 404 aaKnown RBP13.26□□□□□ -0.29
HDAC9-217ENST00000455069 CACNB2Q08289 660 aaPredicted RBP13.26□□□□□ -0.29
HDAC9-217ENST00000455069 TRDNQ13061 729 aa13.26□□□□□ -0.29
HDAC9-217ENST00000455069 SYDE2Q5VT97 1194 aa13.26□□□□□ -0.29
HDAC9-217ENST00000455069 CCDC174Q6PII3 467 aa13.26□□□□□ -0.29
HDAC9-217ENST00000455069 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.26□□□□□ -0.29
HDAC9-217ENST00000455069 RALYLQ86SE5 291 aaKnown RBP13.26□□□□□ -0.29
HDAC9-217ENST00000455069 ALPK3Q96L96 1907 aa13.26□□□□□ -0.29
HDAC9-217ENST00000455069 MMP19Q99542 508 aa13.26□□□□□ -0.29
HDAC9-217ENST00000455069 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.26□□□□□ -0.29
HDAC9-217ENST00000455069 KAT14Q9H8E8 782 aa13.26□□□□□ -0.29
HDAC9-217ENST00000455069 GPHNQ9NQX3 736 aaPredicted RBP13.26□□□□□ -0.29
HDAC9-217ENST00000455069 RPTORQ8N122 1335 aa13.25□□□□□ -0.29
HDAC9-217ENST00000455069 FDX1P10109 184 aa13.25□□□□□ -0.29
HDAC9-217ENST00000455069 CCND3P30281 292 aaPredicted RBP13.25□□□□□ -0.29
HDAC9-217ENST00000455069 COPB2P35606 906 aa13.25□□□□□ -0.29
HDAC9-217ENST00000455069 GJA8P48165 433 aa13.25□□□□□ -0.29
HDAC9-217ENST00000455069 SLC4A3P48751 1232 aa13.25□□□□□ -0.29
HDAC9-217ENST00000455069 IFIT1BQ5T764 474 aaKnown RBP13.25□□□□□ -0.29
HDAC9-217ENST00000455069 CASC1Q6TDU7 716 aa13.25□□□□□ -0.29
HDAC9-217ENST00000455069 TRMT44Q8IYL2 757 aaKnown RBP13.25□□□□□ -0.29
HDAC9-217ENST00000455069 RASEFQ8IZ41 740 aa13.25□□□□□ -0.29
HDAC9-217ENST00000455069 IGDCC4Q8TDY8 1250 aa13.25□□□□□ -0.29
HDAC9-217ENST00000455069 U2AF1L4Q8WU68 220 aaKnown RBP13.25□□□□□ -0.29
HDAC9-217ENST00000455069 FGD4Q96M96 766 aa13.25□□□□□ -0.29
HDAC9-217ENST00000455069 DNAJC25-GNG10A0A024R161 153 aa13.24□□□□□ -0.29
HDAC9-217ENST00000455069 CYP2C19P33261 490 aa13.24□□□□□ -0.29
HDAC9-217ENST00000455069 SLC35G1Q2M3R5 365 aa13.24□□□□□ -0.29
HDAC9-217ENST00000455069 ZNF792Q3KQV3 632 aa13.24□□□□□ -0.29
HDAC9-217ENST00000455069 MUM1L1Q5H9M0 696 aa13.24□□□□□ -0.29
HDAC9-217ENST00000455069 HABP4Q5JVS0 413 aaKnown RBP13.24□□□□□ -0.29
HDAC9-217ENST00000455069 GPATCH4Q5T3I0 446 aaKnown RBP13.24□□□□□ -0.29
HDAC9-217ENST00000455069 OLFML2BQ68BL8 750 aa13.24□□□□□ -0.29
HDAC9-217ENST00000455069 DPP9Q86TI2 863 aa13.24□□□□□ -0.29
HDAC9-217ENST00000455069 STAG2Q8N3U4 1231 aa13.24□□□□□ -0.29
HDAC9-217ENST00000455069 TRPV1Q8NER1 839 aa13.24□□□□□ -0.29
HDAC9-217ENST00000455069 MAML3Q96JK9 1138 aa13.24□□□□□ -0.29
HDAC9-217ENST00000455069 DEFB118Q96PH6 123 aa13.24□□□□□ -0.29
HDAC9-217ENST00000455069 UBA5Q9GZZ9 404 aa13.24□□□□□ -0.29
HDAC9-217ENST00000455069 HOMER2Q9NSB8 354 aa13.24□□□□□ -0.29
HDAC9-217ENST00000455069 CTDP1Q9Y5B0 961 aaPredicted RBP13.24□□□□□ -0.29
HDAC9-217ENST00000455069 IFIT3O14879 490 aaKnown RBP13.23□□□□□ -0.29
HDAC9-217ENST00000455069 SGPL1O95470 568 aa13.23□□□□□ -0.29
HDAC9-217ENST00000455069 ICAM1P05362 532 aa13.23□□□□□ -0.29
HDAC9-217ENST00000455069 CYBAP13498 195 aa13.23□□□□□ -0.29
HDAC9-217ENST00000455069 KCTD2Q14681 263 aa13.23□□□□□ -0.29
HDAC9-217ENST00000455069 ADCK5Q3MIX3 580 aa13.23□□□□□ -0.29
HDAC9-217ENST00000455069 ASPRV1Q53RT3 343 aa13.23□□□□□ -0.29
HDAC9-217ENST00000455069 UBE2Q1Q7Z7E8 422 aa13.23□□□□□ -0.29
HDAC9-217ENST00000455069 CHST13Q8NET6 341 aa13.23□□□□□ -0.29
HDAC9-217ENST00000455069 CRISPLD2Q9H0B8 497 aa13.23□□□□□ -0.29
HDAC9-217ENST00000455069 LY9Q9HBG7 655 aa13.23□□□□□ -0.29
HDAC9-217ENST00000455069 HMX1Q9NP08 348 aaPredicted RBP13.23□□□□□ -0.29
HDAC9-217ENST00000455069 RNF146Q9NTX7 359 aa13.23□□□□□ -0.29
HDAC9-217ENST00000455069 MAD2L2Q9UI95 211 aa13.23□□□□□ -0.29
HDAC9-217ENST00000455069 CCPG1Q9ULG6 757 aa13.23□□□□□ -0.29
HDAC9-217ENST00000455069 RANBP2P49792 3224 aaKnown RBP13.22□□□□□ -0.29
HDAC9-217ENST00000455069 ASTN1O14525 1302 aa13.22□□□□□ -0.29
HDAC9-217ENST00000455069 SH2B2O14492 632 aaPredicted RBP13.22□□□□□ -0.29
HDAC9-217ENST00000455069 PRC1O43663 620 aa13.22□□□□□ -0.29
HDAC9-217ENST00000455069 PARP1P09874 1014 aaKnown RBP13.22□□□□□ -0.29
HDAC9-217ENST00000455069 ALAS1P13196 640 aa13.22□□□□□ -0.29
HDAC9-217ENST00000455069 TROAPQ12815 778 aa13.22□□□□□ -0.29
HDAC9-217ENST00000455069 WTAPQ15007 396 aa13.22□□□□□ -0.29
HDAC9-217ENST00000455069 TMEM67Q5HYA8 995 aa13.22□□□□□ -0.29
HDAC9-217ENST00000455069 ADGRF4Q8IZF3 695 aa13.22□□□□□ -0.29
HDAC9-217ENST00000455069 KCNB2Q92953 911 aa13.22□□□□□ -0.29
HDAC9-217ENST00000455069 ACAD9Q9H845 621 aa13.22□□□□□ -0.29
HDAC9-217ENST00000455069 A1CFQ9NQ94 594 aaKnown RBP13.22□□□□□ -0.29
HDAC9-217ENST00000455069 FBXO40Q9UH90 709 aa13.22□□□□□ -0.29
HDAC9-217ENST00000455069 DIS3Q9Y2L1 958 aaKnown RBP13.22□□□□□ -0.29
HDAC9-217ENST00000455069 PALM3A6NDB9 673 aaPredicted RBP13.21□□□□□ -0.29
HDAC9-217ENST00000455069 NFIBO00712 420 aa13.21□□□□□ -0.29
HDAC9-217ENST00000455069 MCM5P33992 734 aa13.21□□□□□ -0.29
HDAC9-217ENST00000455069 MNX1P50219 401 aaPredicted RBP13.21□□□□□ -0.29
HDAC9-217ENST00000455069 GRM4Q14833 912 aa13.21□□□□□ -0.29
HDAC9-217ENST00000455069 CDC37Q16543 378 aaPredicted RBP13.21□□□□□ -0.29
HDAC9-217ENST00000455069 TKFCQ3LXA3 575 aa13.21□□□□□ -0.29
HDAC9-217ENST00000455069 TSGA10IPQ3SY00 556 aa13.21□□□□□ -0.29
HDAC9-217ENST00000455069 MFSD14CQ5VZR4 134 aa13.21□□□□□ -0.29
HDAC9-217ENST00000455069 LHX8Q68G74 356 aa13.21□□□□□ -0.29
HDAC9-217ENST00000455069 CLEC4DQ8WXI8 215 aa13.21□□□□□ -0.29
HDAC9-217ENST00000455069 TCEANC2Q96MN5 208 aa13.21□□□□□ -0.29
HDAC9-217ENST00000455069 TRERF1Q96PN7 1200 aa13.21□□□□□ -0.29
HDAC9-217ENST00000455069 MYL10Q9BUA6 226 aa13.21□□□□□ -0.29
HDAC9-217ENST00000455069 LRRC2Q9BYS8 371 aa13.21□□□□□ -0.29
HDAC9-217ENST00000455069 WDR19Q8NEZ3 1342 aa13.2□□□□□ -0.3
HDAC9-217ENST00000455069 ERICH2A1L162 156 aa13.2□□□□□ -0.3
HDAC9-217ENST00000455069 HSPA4P34932 840 aa13.2□□□□□ -0.3
HDAC9-217ENST00000455069 CNTN2Q02246 1040 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms