RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 IGHA2P01877 340 aa29.17■■■□□ 2.26
MSH2-203ENST00000454849 OAZ1P54368 228 aa29.17■■■□□ 2.26
MSH2-203ENST00000454849 ZNF792Q3KQV3 632 aa29.17■■■□□ 2.26
MSH2-203ENST00000454849 CCDC178Q5BJE1 867 aa29.17■■■□□ 2.26
MSH2-203ENST00000454849 ANKRD35Q8N283 1001 aa29.17■■■□□ 2.26
MSH2-203ENST00000454849 RNF146Q9NTX7 359 aa29.17■■■□□ 2.26
MSH2-203ENST00000454849 FDX1P10109 184 aa29.16■■■□□ 2.26
MSH2-203ENST00000454849 ANO1Q5XXA6 986 aa29.16■■■□□ 2.26
MSH2-203ENST00000454849 LHX8Q68G74 356 aa29.16■■■□□ 2.26
MSH2-203ENST00000454849 BTNL9Q6UXG8 535 aa29.16■■■□□ 2.26
MSH2-203ENST00000454849 UBE2Q1Q7Z7E8 422 aa29.16■■■□□ 2.26
MSH2-203ENST00000454849 ANKS1AQ92625 1134 aa29.16■■■□□ 2.26
MSH2-203ENST00000454849 SENP2Q9HC62 589 aa29.16■■■□□ 2.26
MSH2-203ENST00000454849 ZNF236Q9UL36 1845 aa29.15■■■□□ 2.26
MSH2-203ENST00000454849 SNHG28P0DPA3 235 aa29.15■■■□□ 2.26
MSH2-203ENST00000454849 MUM1L1Q5H9M0 696 aa29.15■■■□□ 2.26
MSH2-203ENST00000454849 IFIT1BQ5T764 474 aaKnown RBP29.15■■■□□ 2.26
MSH2-203ENST00000454849 RALYLQ86SE5 291 aaKnown RBP29.15■■■□□ 2.26
MSH2-203ENST00000454849 CHST13Q8NET6 341 aa29.15■■■□□ 2.26
MSH2-203ENST00000454849 PAWRQ96IZ0 340 aaKnown RBP29.15■■■□□ 2.26
MSH2-203ENST00000454849 TRERF1Q96PN7 1200 aa29.15■■■□□ 2.26
MSH2-203ENST00000454849 CCPG1Q9ULG6 757 aa29.15■■■□□ 2.26
MSH2-203ENST00000454849 CYBAP13498 195 aa29.14■■■□□ 2.26
MSH2-203ENST00000454849 SEC23AQ15436 765 aa29.14■■■□□ 2.26
MSH2-203ENST00000454849 RANBP17Q9H2T7 1088 aaKnown RBP29.14■■■□□ 2.26
MSH2-203ENST00000454849 IFIT3O14879 490 aaKnown RBP29.13■■■□□ 2.25
MSH2-203ENST00000454849 CDC45O75419 566 aa29.13■■■□□ 2.25
MSH2-203ENST00000454849 CNTN2Q02246 1040 aa29.13■■■□□ 2.25
MSH2-203ENST00000454849 COL9A3Q14050 684 aaPredicted RBP29.13■■■□□ 2.25
MSH2-203ENST00000454849 NCOA7Q8NI08 942 aa29.13■■■□□ 2.25
MSH2-203ENST00000454849 ACAD9Q9H845 621 aa29.13■■■□□ 2.25
MSH2-203ENST00000454849 PPP4R2Q9NY27 417 aa29.13■■■□□ 2.25
MSH2-203ENST00000454849 OGDHLQ9ULD0 1010 aa29.13■■■□□ 2.25
MSH2-203ENST00000454849 SLC27A2O14975 620 aa29.12■■■□□ 2.25
MSH2-203ENST00000454849 NT5C2P49902 561 aa29.12■■■□□ 2.25
MSH2-203ENST00000454849 DPF3Q92784 378 aa29.12■■■□□ 2.25
MSH2-203ENST00000454849 TINF2Q9BSI4 451 aa29.12■■■□□ 2.25
MSH2-203ENST00000454849 FBXO40Q9UH90 709 aa29.12■■■□□ 2.25
MSH2-203ENST00000454849 DNAJC25-GNG10A0A024R161 153 aa29.11■■■□□ 2.25
MSH2-203ENST00000454849 ICAM1P05362 532 aa29.11■■■□□ 2.25
MSH2-203ENST00000454849 MNX1P50219 401 aaPredicted RBP29.11■■■□□ 2.25
MSH2-203ENST00000454849 ANTXR2P58335 489 aa29.11■■■□□ 2.25
MSH2-203ENST00000454849 CREB3L3Q68CJ9 461 aa29.11■■■□□ 2.25
MSH2-203ENST00000454849 VAT1LQ9HCJ6 419 aa29.11■■■□□ 2.25
MSH2-203ENST00000454849 GPHNQ9NQX3 736 aaPredicted RBP29.11■■■□□ 2.25
MSH2-203ENST00000454849 DDX20Q9UHI6 824 aaKnown RBP29.11■■■□□ 2.25
MSH2-203ENST00000454849 SMCHD1A6NHR9 2005 aa29.11■■■□□ 2.25
MSH2-203ENST00000454849 A1CFQ9NQ94 594 aaKnown RBP29.1■■■□□ 2.25
MSH2-203ENST00000454849 DIS3Q9Y2L1 958 aaKnown RBP29.1■■■□□ 2.25
MSH2-203ENST00000454849 DDX49Q9Y6V7 483 aaKnown RBP29.1■■■□□ 2.25
MSH2-203ENST00000454849 MYCNP04198 464 aaPredicted RBP29.09■■■□□ 2.25
MSH2-203ENST00000454849 PARP1P09874 1014 aaKnown RBP29.09■■■□□ 2.25
MSH2-203ENST00000454849 GPATCH4Q5T3I0 446 aaKnown RBP29.09■■■□□ 2.25
MSH2-203ENST00000454849 CASC1Q6TDU7 716 aa29.09■■■□□ 2.25
MSH2-203ENST00000454849 NSMFQ6X4W1 530 aa29.09■■■□□ 2.25
MSH2-203ENST00000454849 STAG2Q8N3U4 1231 aa29.09■■■□□ 2.25
MSH2-203ENST00000454849 FGD4Q96M96 766 aa29.09■■■□□ 2.25
MSH2-203ENST00000454849 PURBQ96QR8 312 aaKnown RBP29.09■■■□□ 2.25
MSH2-203ENST00000454849 NECTIN1Q15223 517 aa29.08■■■□□ 2.25
MSH2-203ENST00000454849 TKFCQ3LXA3 575 aa29.08■■■□□ 2.25
MSH2-203ENST00000454849 TMEM67Q5HYA8 995 aa29.08■■■□□ 2.25
MSH2-203ENST00000454849 MB21D2Q8IYB1 491 aaPredicted RBP29.08■■■□□ 2.25
MSH2-203ENST00000454849 PLXNA1Q9UIW2 1896 aa29.08■■■□□ 2.25
MSH2-203ENST00000454849 POTEB2H3BUK9 544 aa29.07■■■□□ 2.24
MSH2-203ENST00000454849 DHX16O60231 1041 aaKnown RBP29.07■■■□□ 2.24
MSH2-203ENST00000454849 WTAPQ15007 396 aa29.07■■■□□ 2.24
MSH2-203ENST00000454849 NECAB2Q7Z6G3 386 aa29.07■■■□□ 2.24
MSH2-203ENST00000454849 ADGRF4Q8IZF3 695 aa29.07■■■□□ 2.24
MSH2-203ENST00000454849 ERICH2A1L162 156 aa29.06■■■□□ 2.24
MSH2-203ENST00000454849 NFIBO00712 420 aa29.06■■■□□ 2.24
MSH2-203ENST00000454849 SNAI1O95863 264 aaPredicted RBP29.06■■■□□ 2.24
MSH2-203ENST00000454849 USH1GQ495M9 461 aa29.06■■■□□ 2.24
MSH2-203ENST00000454849 ASPRV1Q53RT3 343 aa29.06■■■□□ 2.24
MSH2-203ENST00000454849 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.06■■■□□ 2.24
MSH2-203ENST00000454849 LENG1Q96BZ8 264 aaPredicted RBP29.06■■■□□ 2.24
MSH2-203ENST00000454849 SOWAHBA6NEL2 793 aa29.05■■■□□ 2.24
MSH2-203ENST00000454849 SEPT4O43236 478 aa29.05■■■□□ 2.24
MSH2-203ENST00000454849 ANKLE1Q8NAG6 615 aa29.05■■■□□ 2.24
MSH2-203ENST00000454849 IGDCC4Q8TDY8 1250 aa29.05■■■□□ 2.24
MSH2-203ENST00000454849 CNPY2Q9Y2B0 182 aa29.05■■■□□ 2.24
MSH2-203ENST00000454849 PRC1O43663 620 aa29.04■■■□□ 2.24
MSH2-203ENST00000454849 BAATQ14032 418 aaPredicted RBP29.04■■■□□ 2.24
MSH2-203ENST00000454849 CDC37Q16543 378 aaPredicted RBP29.04■■■□□ 2.24
MSH2-203ENST00000454849 GJC2Q5T442 439 aaPredicted RBP29.04■■■□□ 2.24
MSH2-203ENST00000454849 FAM133AQ8N9E0 248 aa29.04■■■□□ 2.24
MSH2-203ENST00000454849 HTATIP2Q9BUP3 242 aa29.04■■■□□ 2.24
MSH2-203ENST00000454849 LRRC2Q9BYS8 371 aa29.04■■■□□ 2.24
MSH2-203ENST00000454849 C11orf49Q9H6J7 331 aa29.04■■■□□ 2.24
MSH2-203ENST00000454849 CYP39A1Q9NYL5 469 aa29.04■■■□□ 2.24
MSH2-203ENST00000454849 ZHX1Q9UKY1 873 aaPredicted RBP29.04■■■□□ 2.24
MSH2-203ENST00000454849 ZNF865P0CJ78 1059 aaPredicted RBP29.03■■■□□ 2.24
MSH2-203ENST00000454849 SART3Q15020 963 aaKnown RBP29.03■■■□□ 2.24
MSH2-203ENST00000454849 PRPF38BQ5VTL8 546 aaKnown RBP29.03■■■□□ 2.24
MSH2-203ENST00000454849 CLEC4DQ8WXI8 215 aa29.03■■■□□ 2.24
MSH2-203ENST00000454849 MAD2L2Q9UI95 211 aa29.03■■■□□ 2.24
MSH2-203ENST00000454849 PTPDC1A2A3K4 754 aa29.02■■■□□ 2.24
MSH2-203ENST00000454849 KLRF2D3W0D1 207 aa29.02■■■□□ 2.24
MSH2-203ENST00000454849 H0YGN5 161 aa29.02■■■□□ 2.24
MSH2-203ENST00000454849 ARMCX2Q7L311 632 aa29.02■■■□□ 2.24
MSH2-203ENST00000454849 CCDC144CPQ8IYA2 1237 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms