RNA–Protein interactions for RNA: ENST00000453536.5

RFTN1-207, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 5

Gene RFTN1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-207ENST00000453536 TINF2Q9BSI4 451 aa16.65■□□□□ 0.26
RFTN1-207ENST00000453536 ZMYM6O95789 1325 aa16.65■□□□□ 0.26
RFTN1-207ENST00000453536 SEPT4O43236 478 aa16.64■□□□□ 0.25
RFTN1-207ENST00000453536 ZBED4O75132 1171 aa16.64■□□□□ 0.25
RFTN1-207ENST00000453536 GOLGA8HP0CJ92 632 aa16.64■□□□□ 0.25
RFTN1-207ENST00000453536 STAT2P52630 851 aa16.64■□□□□ 0.25
RFTN1-207ENST00000453536 AKNAD1Q5T1N1 836 aa16.64■□□□□ 0.25
RFTN1-207ENST00000453536 STAG1Q8WVM7 1258 aa16.64■□□□□ 0.25
RFTN1-207ENST00000453536 RNF146Q9NTX7 359 aa16.64■□□□□ 0.25
RFTN1-207ENST00000453536 NR2E3Q9Y5X4 410 aa16.64■□□□□ 0.25
RFTN1-207ENST00000453536 B4E1Z4 1266 aa16.63■□□□□ 0.25
RFTN1-207ENST00000453536 ALAS1P13196 640 aa16.63■□□□□ 0.25
RFTN1-207ENST00000453536 MAGEA10P43363 369 aaPredicted RBP16.63■□□□□ 0.25
RFTN1-207ENST00000453536 PTH1RQ03431 593 aa16.63■□□□□ 0.25
RFTN1-207ENST00000453536 COL9A3Q14050 684 aaPredicted RBP16.63■□□□□ 0.25
RFTN1-207ENST00000453536 LRRC41Q15345 812 aa16.63■□□□□ 0.25
RFTN1-207ENST00000453536 LRCH3Q96II8 777 aa16.63■□□□□ 0.25
RFTN1-207ENST00000453536 A1CFQ9NQ94 594 aaKnown RBP16.63■□□□□ 0.25
RFTN1-207ENST00000453536 SOWAHBA6NEL2 793 aa16.62■□□□□ 0.25
RFTN1-207ENST00000453536 ATP2A1O14983 1001 aa16.62■□□□□ 0.25
RFTN1-207ENST00000453536 KDM4AO75164 1064 aa16.62■□□□□ 0.25
RFTN1-207ENST00000453536 ADCYAP1R1P41586 468 aa16.62■□□□□ 0.25
RFTN1-207ENST00000453536 MDM2Q00987 491 aaPredicted RBP16.62■□□□□ 0.25
RFTN1-207ENST00000453536 MFSD6Q6ZSS7 791 aa16.62■□□□□ 0.25
RFTN1-207ENST00000453536 DDX11Q96FC9 970 aa16.62■□□□□ 0.25
RFTN1-207ENST00000453536 ZHX1Q9UKY1 873 aaPredicted RBP16.62■□□□□ 0.25
RFTN1-207ENST00000453536 CTDP1Q9Y5B0 961 aaPredicted RBP16.62■□□□□ 0.25
RFTN1-207ENST00000453536 BAZ2BQ9UIF8 2168 aaKnown RBP16.61■□□□□ 0.25
RFTN1-207ENST00000453536 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.61■□□□□ 0.25
RFTN1-207ENST00000453536 DNM1LO00429 736 aa16.61■□□□□ 0.25
RFTN1-207ENST00000453536 PDHBP11177 359 aa16.61■□□□□ 0.25
RFTN1-207ENST00000453536 RTP1P59025 263 aa16.61■□□□□ 0.25
RFTN1-207ENST00000453536 SH3RF1Q7Z6J0 888 aa16.61■□□□□ 0.25
RFTN1-207ENST00000453536 ANKRD35Q8N283 1001 aa16.61■□□□□ 0.25
RFTN1-207ENST00000453536 GDF15Q99988 308 aa16.61■□□□□ 0.25
RFTN1-207ENST00000453536 KATNBL1Q9H079 304 aa16.61■□□□□ 0.25
RFTN1-207ENST00000453536 SENP2Q9HC62 589 aa16.61■□□□□ 0.25
RFTN1-207ENST00000453536 ATP11BQ9Y2G3 1177 aa16.61■□□□□ 0.25
RFTN1-207ENST00000453536 NFIBO00712 420 aa16.6■□□□□ 0.25
RFTN1-207ENST00000453536 TOP1P11387 765 aaKnown RBP16.6■□□□□ 0.25
RFTN1-207ENST00000453536 TRIM60Q495X7 471 aa16.6■□□□□ 0.25
RFTN1-207ENST00000453536 CYB5R4Q7L1T6 521 aa16.6■□□□□ 0.25
RFTN1-207ENST00000453536 ARMCX2Q7L311 632 aa16.6■□□□□ 0.25
RFTN1-207ENST00000453536 TRERF1Q96PN7 1200 aa16.6■□□□□ 0.25
RFTN1-207ENST00000453536 UBA5Q9GZZ9 404 aa16.6■□□□□ 0.25
RFTN1-207ENST00000453536 XPNPEP3Q9NQH7 507 aa16.6■□□□□ 0.25
RFTN1-207ENST00000453536 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.6■□□□□ 0.25
RFTN1-207ENST00000453536 SYNPO2Q9UMS6 1093 aa16.6■□□□□ 0.25
RFTN1-207ENST00000453536 SYNRGQ9UMZ2 1314 aa16.6■□□□□ 0.25
RFTN1-207ENST00000453536 ZNF213O14771 459 aa16.59■□□□□ 0.25
RFTN1-207ENST00000453536 ADAMTS4O75173 837 aa16.59■□□□□ 0.25
RFTN1-207ENST00000453536 CHMLP26374 656 aa16.59■□□□□ 0.25
RFTN1-207ENST00000453536 SYDE2Q5VT97 1194 aa16.59■□□□□ 0.25
RFTN1-207ENST00000453536 SLC30A10Q6XR72 485 aa16.59■□□□□ 0.25
RFTN1-207ENST00000453536 EEPD1Q7L9B9 569 aa16.59■□□□□ 0.25
RFTN1-207ENST00000453536 FAM160B2Q86V87 743 aa16.59■□□□□ 0.25
RFTN1-207ENST00000453536 CCDC144CPQ8IYA2 1237 aa16.59■□□□□ 0.25
RFTN1-207ENST00000453536 FAM133AQ8N9E0 248 aa16.59■□□□□ 0.25
RFTN1-207ENST00000453536 DCAF4Q8WV16 495 aa16.59■□□□□ 0.25
RFTN1-207ENST00000453536 RANBP17Q9H2T7 1088 aaKnown RBP16.59■□□□□ 0.25
RFTN1-207ENST00000453536 ACAD9Q9H845 621 aa16.59■□□□□ 0.25
RFTN1-207ENST00000453536 PDGFCQ9NRA1 345 aa16.59■□□□□ 0.25
RFTN1-207ENST00000453536 TCP11L1Q9NUJ3 509 aa16.59■□□□□ 0.25
RFTN1-207ENST00000453536 SLC5A4Q9NY91 659 aa16.59■□□□□ 0.25
RFTN1-207ENST00000453536 CCPG1Q9ULG6 757 aa16.59■□□□□ 0.25
RFTN1-207ENST00000453536 MSCO60682 206 aa16.58■□□□□ 0.24
RFTN1-207ENST00000453536 ITGB8P26012 769 aa16.58■□□□□ 0.24
RFTN1-207ENST00000453536 ZNF543Q08ER8 600 aa16.58■□□□□ 0.24
RFTN1-207ENST00000453536 NSMFQ6X4W1 530 aa16.58■□□□□ 0.24
RFTN1-207ENST00000453536 STOX1Q6ZVD7 989 aa16.58■□□□□ 0.24
RFTN1-207ENST00000453536 CHST13Q8NET6 341 aa16.58■□□□□ 0.24
RFTN1-207ENST00000453536 CHURC1Q8WUH1 139 aa16.58■□□□□ 0.24
RFTN1-207ENST00000453536 DSCC1Q9BVC3 393 aa16.58■□□□□ 0.24
RFTN1-207ENST00000453536 ZSWIM5Q9P217 1185 aa16.58■□□□□ 0.24
RFTN1-207ENST00000453536 DIS3Q9Y2L1 958 aaKnown RBP16.58■□□□□ 0.24
RFTN1-207ENST00000453536 KBTBD13C9JR72 458 aa16.57■□□□□ 0.24
RFTN1-207ENST00000453536 COPB2P35606 906 aa16.57■□□□□ 0.24
RFTN1-207ENST00000453536 OAZ1P54368 228 aa16.57■□□□□ 0.24
RFTN1-207ENST00000453536 CCDC144BQ3MJ40 725 aa16.57■□□□□ 0.24
RFTN1-207ENST00000453536 MAMDC4Q6UXC1 1216 aa16.57■□□□□ 0.24
RFTN1-207ENST00000453536 SLC39A5Q6ZMH5 540 aa16.57■□□□□ 0.24
RFTN1-207ENST00000453536 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.57■□□□□ 0.24
RFTN1-207ENST00000453536 FBXO16Q8IX29 292 aaPredicted RBP16.57■□□□□ 0.24
RFTN1-207ENST00000453536 ENAHQ8N8S7 591 aaPredicted RBP16.57■□□□□ 0.24
RFTN1-207ENST00000453536 CYP39A1Q9NYL5 469 aa16.57■□□□□ 0.24
RFTN1-207ENST00000453536 COL6A3P12111 3177 aa16.57■□□□□ 0.24
RFTN1-207ENST00000453536 TNKSO95271 1327 aa16.56■□□□□ 0.24
RFTN1-207ENST00000453536 SYNGAP1Q96PV0 1343 aa16.56■□□□□ 0.24
RFTN1-207ENST00000453536 POTEB2H3BUK9 544 aa16.56■□□□□ 0.24
RFTN1-207ENST00000453536 CTAGE5O15320 804 aa16.56■□□□□ 0.24
RFTN1-207ENST00000453536 PLA2G6O60733 806 aa16.56■□□□□ 0.24
RFTN1-207ENST00000453536 SNHG28P0DPA3 235 aa16.56■□□□□ 0.24
RFTN1-207ENST00000453536 RARBP10826 455 aa16.56■□□□□ 0.24
RFTN1-207ENST00000453536 AKR1A1P14550 325 aa16.56■□□□□ 0.24
RFTN1-207ENST00000453536 BEX3Q00994 111 aa16.56■□□□□ 0.24
RFTN1-207ENST00000453536 ACVR2BQ13705 512 aa16.56■□□□□ 0.24
RFTN1-207ENST00000453536 SLC35G1Q2M3R5 365 aa16.56■□□□□ 0.24
RFTN1-207ENST00000453536 BTNL9Q6UXG8 535 aa16.56■□□□□ 0.24
RFTN1-207ENST00000453536 CHST3Q7LGC8 479 aa16.56■□□□□ 0.24
RFTN1-207ENST00000453536 PPP1R13LQ8WUF5 828 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms