RNA–Protein interactions for RNA: ENST00000453466.1

PMPCB-205, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 1,509 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-205ENST00000453466 NFXL1Q6ZNB6 911 aa23.3■■□□□ 1.32
PMPCB-205ENST00000453466 TMX3Q96JJ7 454 aa23.3■■□□□ 1.32
PMPCB-205ENST00000453466 SENP2Q9HC62 589 aa23.3■■□□□ 1.32
PMPCB-205ENST00000453466 CCDC69A6NI79 296 aa23.29■■□□□ 1.32
PMPCB-205ENST00000453466 SH2B2O14492 632 aaPredicted RBP23.29■■□□□ 1.32
PMPCB-205ENST00000453466 SLAIN1Q8ND83 568 aa23.29■■□□□ 1.32
PMPCB-205ENST00000453466 PXYLP1Q8TE99 480 aa23.29■■□□□ 1.32
PMPCB-205ENST00000453466 ZSCAN31Q96LW9 406 aaPredicted RBP23.29■■□□□ 1.32
PMPCB-205ENST00000453466 FCER1AP12319 257 aa23.28■■□□□ 1.32
PMPCB-205ENST00000453466 CYP2B6P20813 491 aa23.28■■□□□ 1.32
PMPCB-205ENST00000453466 RGS2P41220 211 aa23.28■■□□□ 1.32
PMPCB-205ENST00000453466 MAP2K5Q13163 448 aa23.28■■□□□ 1.32
PMPCB-205ENST00000453466 CUL4AQ13619 759 aa23.28■■□□□ 1.32
PMPCB-205ENST00000453466 UBA5Q9GZZ9 404 aa23.28■■□□□ 1.32
PMPCB-205ENST00000453466 ZSWIM8A7E2V4 1837 aa23.28■■□□□ 1.32
PMPCB-205ENST00000453466 XRCC5P13010 732 aaKnown RBP23.28■■□□□ 1.32
PMPCB-205ENST00000453466 SNAP25P60880 206 aa23.28■■□□□ 1.32
PMPCB-205ENST00000453466 GRB14Q14449 540 aa23.28■■□□□ 1.32
PMPCB-205ENST00000453466 CCDC174Q6PII3 467 aa23.28■■□□□ 1.32
PMPCB-205ENST00000453466 ABRAQ8N0Z2 381 aa23.28■■□□□ 1.32
PMPCB-205ENST00000453466 USP6NLQ92738 828 aa23.28■■□□□ 1.32
PMPCB-205ENST00000453466 LRRC2Q9BYS8 371 aa23.28■■□□□ 1.32
PMPCB-205ENST00000453466 RANBP17Q9H2T7 1088 aaKnown RBP23.28■■□□□ 1.32
PMPCB-205ENST00000453466 GPHNQ9NQX3 736 aaPredicted RBP23.28■■□□□ 1.32
PMPCB-205ENST00000453466 BIN2Q9UBW5 565 aaPredicted RBP23.28■■□□□ 1.32
PMPCB-205ENST00000453466 CCDC85CA6NKD9 419 aa23.27■■□□□ 1.32
PMPCB-205ENST00000453466 TROAPQ12815 778 aa23.27■■□□□ 1.32
PMPCB-205ENST00000453466 TOB2Q14106 344 aaPredicted RBP23.27■■□□□ 1.32
PMPCB-205ENST00000453466 KCTD2Q14681 263 aa23.27■■□□□ 1.32
PMPCB-205ENST00000453466 DPP9Q86TI2 863 aa23.27■■□□□ 1.32
PMPCB-205ENST00000453466 TRMT44Q8IYL2 757 aaKnown RBP23.27■■□□□ 1.32
PMPCB-205ENST00000453466 CHST13Q8NET6 341 aa23.27■■□□□ 1.32
PMPCB-205ENST00000453466 SH3TC2Q8TF17 1288 aa23.27■■□□□ 1.32
PMPCB-205ENST00000453466 ARMC5Q96C12 935 aa23.27■■□□□ 1.32
PMPCB-205ENST00000453466 SH2B1Q9NRF2 756 aaPredicted RBP23.27■■□□□ 1.32
PMPCB-205ENST00000453466 SLC5A4Q9NY91 659 aa23.27■■□□□ 1.32
PMPCB-205ENST00000453466 FBXO40Q9UH90 709 aa23.27■■□□□ 1.32
PMPCB-205ENST00000453466 PNMA2Q9UL42 364 aa23.27■■□□□ 1.32
PMPCB-205ENST00000453466 RIPK3Q9Y572 518 aa23.27■■□□□ 1.32
PMPCB-205ENST00000453466 A0A0G2JMZ2 1700 aa23.27■■□□□ 1.32
PMPCB-205ENST00000453466 KLRF2D3W0D1 207 aa23.26■■□□□ 1.31
PMPCB-205ENST00000453466 ADORA2AP29274 412 aa23.26■■□□□ 1.31
PMPCB-205ENST00000453466 GRM4Q14833 912 aa23.26■■□□□ 1.31
PMPCB-205ENST00000453466 TKFCQ3LXA3 575 aa23.26■■□□□ 1.31
PMPCB-205ENST00000453466 ZNF654Q8IZM8 581 aa23.26■■□□□ 1.31
PMPCB-205ENST00000453466 NUP133Q8WUM0 1156 aa23.26■■□□□ 1.31
PMPCB-205ENST00000453466 INTS4Q96HW7 963 aaKnown RBP23.26■■□□□ 1.31
PMPCB-205ENST00000453466 AGBL1Q96MI9 1066 aa23.26■■□□□ 1.31
PMPCB-205ENST00000453466 MMP19Q99542 508 aa23.26■■□□□ 1.31
PMPCB-205ENST00000453466 MAP3K14Q99558 947 aa23.26■■□□□ 1.31
PMPCB-205ENST00000453466 MAD2L2Q9UI95 211 aa23.26■■□□□ 1.31
PMPCB-205ENST00000453466 SLC12A7Q9Y666 1083 aa23.26■■□□□ 1.31
PMPCB-205ENST00000453466 MGAMO43451 1857 aa23.26■■□□□ 1.31
PMPCB-205ENST00000453466 PARP14Q460N5 1801 aa23.25■■□□□ 1.31
PMPCB-205ENST00000453466 PALM3A6NDB9 673 aaPredicted RBP23.25■■□□□ 1.31
PMPCB-205ENST00000453466 DHX16O60231 1041 aaKnown RBP23.25■■□□□ 1.31
PMPCB-205ENST00000453466 DDAH1O94760 285 aa23.25■■□□□ 1.31
PMPCB-205ENST00000453466 ICAM1P05362 532 aa23.25■■□□□ 1.31
PMPCB-205ENST00000453466 FGD1P98174 961 aa23.25■■□□□ 1.31
PMPCB-205ENST00000453466 SYNE3Q6ZMZ3 975 aa23.25■■□□□ 1.31
PMPCB-205ENST00000453466 Q6ZUG5 572 aa23.25■■□□□ 1.31
PMPCB-205ENST00000453466 ADGRF4Q8IZF3 695 aa23.25■■□□□ 1.31
PMPCB-205ENST00000453466 STAG2Q8N3U4 1231 aa23.25■■□□□ 1.31
PMPCB-205ENST00000453466 APBA2Q99767 749 aa23.25■■□□□ 1.31
PMPCB-205ENST00000453466 ZNF536O15090 1300 aa23.25■■□□□ 1.31
PMPCB-205ENST00000453466 CALM1P0DP23 149 aa23.24■■□□□ 1.31
PMPCB-205ENST00000453466 CALM2P0DP24 149 aa23.24■■□□□ 1.31
PMPCB-205ENST00000453466 CALM3P0DP25 149 aa23.24■■□□□ 1.31
PMPCB-205ENST00000453466 ELNP15502 786 aa23.24■■□□□ 1.31
PMPCB-205ENST00000453466 KIF5BP33176 963 aa23.24■■□□□ 1.31
PMPCB-205ENST00000453466 EVCP57679 992 aa23.24■■□□□ 1.31
PMPCB-205ENST00000453466 UBXN2AP68543 259 aa23.24■■□□□ 1.31
PMPCB-205ENST00000453466 SGMS1Q86VZ5 419 aa23.24■■□□□ 1.31
PMPCB-205ENST00000453466 CTCFLQ8NI51 663 aaPredicted RBP23.24■■□□□ 1.31
PMPCB-205ENST00000453466 TCEANC2Q96MN5 208 aa23.24■■□□□ 1.31
PMPCB-205ENST00000453466 CPVLQ9H3G5 476 aa23.24■■□□□ 1.31
PMPCB-205ENST00000453466 CCPG1Q9ULG6 757 aa23.24■■□□□ 1.31
PMPCB-205ENST00000453466 HSP90AA1P07900 732 aaKnown RBP23.23■■□□□ 1.31
PMPCB-205ENST00000453466 HOXC6P09630 235 aa23.23■■□□□ 1.31
PMPCB-205ENST00000453466 ALAS1P13196 640 aa23.23■■□□□ 1.31
PMPCB-205ENST00000453466 ZNF333Q96JL9 665 aa23.23■■□□□ 1.31
PMPCB-205ENST00000453466 VAT1LQ9HCJ6 419 aa23.23■■□□□ 1.31
PMPCB-205ENST00000453466 HOMER2Q9NSB8 354 aa23.23■■□□□ 1.31
PMPCB-205ENST00000453466 DDX11Q96FC9 970 aa23.23■■□□□ 1.31
PMPCB-205ENST00000453466 TRERF1Q96PN7 1200 aa23.23■■□□□ 1.31
PMPCB-205ENST00000453466 ACAD9Q9H845 621 aa23.23■■□□□ 1.31
PMPCB-205ENST00000453466 TPCN1Q9ULQ1 816 aa23.23■■□□□ 1.31
PMPCB-205ENST00000453466 HMGCRP04035 888 aa23.22■■□□□ 1.31
PMPCB-205ENST00000453466 ANKRD35Q8N283 1001 aa23.22■■□□□ 1.31
PMPCB-205ENST00000453466 MYL10Q9BUA6 226 aa23.22■■□□□ 1.31
PMPCB-205ENST00000453466 JMJD4Q9H9V9 463 aa23.22■■□□□ 1.31
PMPCB-205ENST00000453466 RNF146Q9NTX7 359 aa23.22■■□□□ 1.31
PMPCB-205ENST00000453466 DOCK3Q8IZD9 2030 aa23.21■■□□□ 1.31
PMPCB-205ENST00000453466 COBLO75128 1261 aa23.21■■□□□ 1.31
PMPCB-205ENST00000453466 DDIT3P35638 169 aa23.21■■□□□ 1.31
PMPCB-205ENST00000453466 GNAQP50148 359 aa23.21■■□□□ 1.31
PMPCB-205ENST00000453466 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.21■■□□□ 1.31
PMPCB-205ENST00000453466 HTTP42858 3142 aa23.2■■□□□ 1.3
PMPCB-205ENST00000453466 INHAP05111 366 aa23.2■■□□□ 1.3
PMPCB-205ENST00000453466 CDC37Q16543 378 aaPredicted RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms