RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 RPL13P26373 211 aaKnown RBP8.55□□□□□ -1.04
RIF1-206ENST00000453091 HSPA1LP34931 641 aa8.55□□□□□ -1.04
RIF1-206ENST00000453091 PPM1FP49593 454 aaPredicted RBP8.55□□□□□ -1.04
RIF1-206ENST00000453091 SEPT14Q6ZU15 432 aa8.55□□□□□ -1.04
RIF1-206ENST00000453091 CYB5R4Q7L1T6 521 aa8.55□□□□□ -1.04
RIF1-206ENST00000453091 A0A1W2PQ27 194 aa8.55□□□□□ -1.04
RIF1-206ENST00000453091 A0A1W2PQ64 194 aa8.55□□□□□ -1.04
RIF1-206ENST00000453091 A0A1W2PQD8 194 aa8.55□□□□□ -1.04
RIF1-206ENST00000453091 CACNB3P54284 484 aa8.55□□□□□ -1.04
RIF1-206ENST00000453091 DIXDC1Q155Q3 683 aa8.55□□□□□ -1.04
RIF1-206ENST00000453091 DHX40Q8IX18 779 aaKnown RBP8.55□□□□□ -1.04
RIF1-206ENST00000453091 FAM71BQ8TC56 605 aa8.55□□□□□ -1.04
RIF1-206ENST00000453091 JDP2Q8WYK2 163 aa8.55□□□□□ -1.04
RIF1-206ENST00000453091 GJA10Q969M2 543 aa8.55□□□□□ -1.04
RIF1-206ENST00000453091 PAGE5Q96GU1 130 aa8.55□□□□□ -1.04
RIF1-206ENST00000453091 PANK4Q9NVE7 773 aa8.55□□□□□ -1.04
RIF1-206ENST00000453091 SCG2P13521 617 aa8.55□□□□□ -1.04
RIF1-206ENST00000453091 RBM6P78332 1123 aaKnown RBP8.55□□□□□ -1.04
RIF1-206ENST00000453091 CUL4BQ13620 913 aa8.55□□□□□ -1.04
RIF1-206ENST00000453091 MFSD14BQ5SR56 506 aa8.55□□□□□ -1.04
RIF1-206ENST00000453091 MICAL1Q8TDZ2 1067 aa8.55□□□□□ -1.04
RIF1-206ENST00000453091 STMN2Q93045 179 aa8.55□□□□□ -1.04
RIF1-206ENST00000453091 TUBGCP2Q9BSJ2 902 aa8.55□□□□□ -1.04
RIF1-206ENST00000453091 MLXIPQ9HAP2 919 aa8.55□□□□□ -1.04
RIF1-206ENST00000453091 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.55□□□□□ -1.04
RIF1-206ENST00000453091 FAM196BA6NMK8 535 aa8.55□□□□□ -1.04
RIF1-206ENST00000453091 USP17L8P0C7I0 530 aa8.55□□□□□ -1.04
RIF1-206ENST00000453091 PPP1R16BQ96T49 567 aa8.55□□□□□ -1.04
RIF1-206ENST00000453091 EYA3Q99504 573 aa8.55□□□□□ -1.04
RIF1-206ENST00000453091 NEDD4P46934 1319 aa8.54□□□□□ -1.04
RIF1-206ENST00000453091 ARHGEF35A5YM69 484 aa8.54□□□□□ -1.04
RIF1-206ENST00000453091 RGS16O15492 202 aaPredicted RBP8.54□□□□□ -1.04
RIF1-206ENST00000453091 FMNL1O95466 1100 aaPredicted RBP8.54□□□□□ -1.04
RIF1-206ENST00000453091 SUSD4Q5VX71 490 aa8.54□□□□□ -1.04
RIF1-206ENST00000453091 ARHGEF25Q86VW2 580 aa8.54□□□□□ -1.04
RIF1-206ENST00000453091 FAM133AQ8N9E0 248 aa8.54□□□□□ -1.04
RIF1-206ENST00000453091 PNMA1Q8ND90 353 aa8.54□□□□□ -1.04
RIF1-206ENST00000453091 ATP2A1O14983 1001 aa8.54□□□□□ -1.04
RIF1-206ENST00000453091 MRPL12P52815 198 aaKnown RBP8.54□□□□□ -1.04
RIF1-206ENST00000453091 KCTD1Q719H9 257 aa8.54□□□□□ -1.04
RIF1-206ENST00000453091 PDLIM2Q96JY6 352 aa8.54□□□□□ -1.04
RIF1-206ENST00000453091 FNBP1Q96RU3 617 aa8.54□□□□□ -1.04
RIF1-206ENST00000453091 BCS1LQ9Y276 419 aa8.54□□□□□ -1.04
RIF1-206ENST00000453091 RPAP1Q9BWH6 1393 aaPredicted RBP8.54□□□□□ -1.04
RIF1-206ENST00000453091 ESYT3A0FGR9 886 aa8.54□□□□□ -1.04
RIF1-206ENST00000453091 CASP8Q14790 479 aa8.54□□□□□ -1.04
RIF1-206ENST00000453091 MYOCDQ8IZQ8 938 aa8.54□□□□□ -1.04
RIF1-206ENST00000453091 COA7Q96BR5 231 aa8.54□□□□□ -1.04
RIF1-206ENST00000453091 TRIM7Q9C029 511 aa8.54□□□□□ -1.04
RIF1-206ENST00000453091 SH2B2O14492 632 aaPredicted RBP8.54□□□□□ -1.04
RIF1-206ENST00000453091 STX2P32856 288 aa8.54□□□□□ -1.04
RIF1-206ENST00000453091 EIF4A3P38919 411 aaKnown RBP8.54□□□□□ -1.04
RIF1-206ENST00000453091 SLC1A4P43007 532 aa8.54□□□□□ -1.04
RIF1-206ENST00000453091 PDCLQ13371 301 aa8.54□□□□□ -1.04
RIF1-206ENST00000453091 POLA2Q14181 598 aa8.54□□□□□ -1.04
RIF1-206ENST00000453091 NEDD9Q14511 834 aa8.54□□□□□ -1.04
RIF1-206ENST00000453091 UBE2SQ16763 222 aa8.54□□□□□ -1.04
RIF1-206ENST00000453091 PARP10Q53GL7 1025 aa8.54□□□□□ -1.04
RIF1-206ENST00000453091 KAZNQ674X7 775 aa8.54□□□□□ -1.04
RIF1-206ENST00000453091 ARMCX5Q6P1M9 558 aa8.54□□□□□ -1.04
RIF1-206ENST00000453091 PPFIBP2Q8ND30 876 aa8.54□□□□□ -1.04
RIF1-206ENST00000453091 IMPG2Q9BZV3 1241 aa8.54□□□□□ -1.04
RIF1-206ENST00000453091 MKRN3Q13064 507 aaKnown RBP8.54□□□□□ -1.04
RIF1-206ENST00000453091 NNTQ13423 1086 aa8.54□□□□□ -1.04
RIF1-206ENST00000453091 TUBB2AQ13885 445 aa8.54□□□□□ -1.04
RIF1-206ENST00000453091 RABGGTAQ92696 567 aa8.54□□□□□ -1.04
RIF1-206ENST00000453091 TUBB2BQ9BVA1 445 aa8.54□□□□□ -1.04
RIF1-206ENST00000453091 CACNA2D3Q8IZS8 1091 aa8.54□□□□□ -1.04
RIF1-206ENST00000453091 PCIF1Q9H4Z3 704 aa8.54□□□□□ -1.04
RIF1-206ENST00000453091 FAM114A2Q9NRY5 505 aa8.54□□□□□ -1.04
RIF1-206ENST00000453091 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.54□□□□□ -1.04
RIF1-206ENST00000453091 MKRN1Q9UHC7 482 aaKnown RBP8.54□□□□□ -1.04
RIF1-206ENST00000453091 DNM3Q9UQ16 869 aa8.54□□□□□ -1.04
RIF1-206ENST00000453091 PLA2G4DQ86XP0 818 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 PAGR1Q9BTK6 254 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 HAUS4Q9H6D7 363 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 ZSWIM5Q9P217 1185 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.53□□□□□ -1.042e-6■■□□□ 11.5
RIF1-206ENST00000453091 MYOM2P54296 1465 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 ACTN4O43707 911 aaKnown RBP8.53□□□□□ -1.04
RIF1-206ENST00000453091 NMT2O60551 498 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 IFNB1P01574 187 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 ADAM9Q13443 819 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 CFAP157Q5JU67 520 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 CC2D1AQ6P1N0 951 aaPredicted RBP8.53□□□□□ -1.04
RIF1-206ENST00000453091 CCDC13Q8IYE1 715 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 ZBTB38Q8NAP3 1195 aaPredicted RBP8.53□□□□□ -1.04
RIF1-206ENST00000453091 GDAP1Q8TB36 358 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 PIGBQ92521 554 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 PIGSQ96S52 555 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 AMFRQ9UKV5 643 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 PLA2R1Q13018 1463 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 PP2D1A8MPX8 630 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 PPIP5K2O43314 1243 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 KRT19P08727 400 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 OR52Z1P0C646 297 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 TRIM58Q8NG06 486 aa8.53□□□□□ -1.04
RIF1-206ENST00000453091 JPH2Q9BR39 696 aaPredicted RBP8.53□□□□□ -1.04
RIF1-206ENST00000453091 NOVA2Q9UNW9 492 aaKnown RBP8.53□□□□□ -1.04
RIF1-206ENST00000453091 ITSN2Q9NZM3 1697 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms