RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 KCNA10Q16322 511 aa10.54□□□□□ -0.72
DEPDC1B-202ENST00000453022 GMCL1P1Q8NEA9 526 aa10.54□□□□□ -0.72
DEPDC1B-202ENST00000453022 MAFAQ8NHW3 353 aaPredicted RBP10.54□□□□□ -0.72
DEPDC1B-202ENST00000453022 TOX2Q96NM4 488 aa10.54□□□□□ -0.72
DEPDC1B-202ENST00000453022 KATNBL1Q9H079 304 aa10.54□□□□□ -0.72
DEPDC1B-202ENST00000453022 TMEM39AQ9NV64 488 aa10.54□□□□□ -0.72
DEPDC1B-202ENST00000453022 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.54□□□□□ -0.72
DEPDC1B-202ENST00000453022 TBX21Q9UL17 535 aa10.54□□□□□ -0.72
DEPDC1B-202ENST00000453022 TTLL1O95922 423 aa10.53□□□□□ -0.72
DEPDC1B-202ENST00000453022 GNAT2P19087 354 aa10.53□□□□□ -0.72
DEPDC1B-202ENST00000453022 CCDC144BQ3MJ40 725 aa10.53□□□□□ -0.72
DEPDC1B-202ENST00000453022 IFNL3Q8IZI9 196 aa10.53□□□□□ -0.72
DEPDC1B-202ENST00000453022 ZNF444Q8N0Y2 327 aaPredicted RBP10.53□□□□□ -0.72
DEPDC1B-202ENST00000453022 NUP133Q8WUM0 1156 aa10.53□□□□□ -0.72
DEPDC1B-202ENST00000453022 GPATCH3Q96I76 525 aa10.53□□□□□ -0.72
DEPDC1B-202ENST00000453022 UPF3AQ9H1J1 476 aaKnown RBP10.53□□□□□ -0.72
DEPDC1B-202ENST00000453022 FEM1BQ9UK73 627 aa10.53□□□□□ -0.72
DEPDC1B-202ENST00000453022 SYNPO2Q9UMS6 1093 aa10.53□□□□□ -0.72
DEPDC1B-202ENST00000453022 ZNF536O15090 1300 aa10.52□□□□□ -0.72
DEPDC1B-202ENST00000453022 TMEM265A0A087WTH1 108 aa10.52□□□□□ -0.72
DEPDC1B-202ENST00000453022 DCDC2CA8MYV0 355 aa10.52□□□□□ -0.72
DEPDC1B-202ENST00000453022 PATL2C9JE40 543 aaKnown RBP10.52□□□□□ -0.72
DEPDC1B-202ENST00000453022 CTAGE5O15320 804 aa10.52□□□□□ -0.72
DEPDC1B-202ENST00000453022 FOXP2O15409 715 aa10.52□□□□□ -0.72
DEPDC1B-202ENST00000453022 APPP05067 770 aa10.52□□□□□ -0.72
DEPDC1B-202ENST00000453022 ASGR1P07306 291 aa10.52□□□□□ -0.72
DEPDC1B-202ENST00000453022 C6orf222P0C671 652 aaPredicted RBP10.52□□□□□ -0.72
DEPDC1B-202ENST00000453022 CDK7P50613 346 aa10.52□□□□□ -0.72
DEPDC1B-202ENST00000453022 OAZ1P54368 228 aa10.52□□□□□ -0.72
DEPDC1B-202ENST00000453022 CNTN2Q02246 1040 aa10.52□□□□□ -0.72
DEPDC1B-202ENST00000453022 ARMCX2Q7L311 632 aa10.52□□□□□ -0.72
DEPDC1B-202ENST00000453022 CCDC144CPQ8IYA2 1237 aa10.52□□□□□ -0.72
DEPDC1B-202ENST00000453022 ANKRD35Q8N283 1001 aa10.52□□□□□ -0.72
DEPDC1B-202ENST00000453022 CHST13Q8NET6 341 aa10.52□□□□□ -0.72
DEPDC1B-202ENST00000453022 NEDD1Q8NHV4 660 aa10.52□□□□□ -0.72
DEPDC1B-202ENST00000453022 PI4K2BQ8TCG2 481 aa10.52□□□□□ -0.72
DEPDC1B-202ENST00000453022 OTUD7AQ8TE49 926 aaPredicted RBP10.52□□□□□ -0.72
DEPDC1B-202ENST00000453022 ABHD16BQ9H3Z7 469 aa10.52□□□□□ -0.72
DEPDC1B-202ENST00000453022 HOMER2Q9NSB8 354 aa10.52□□□□□ -0.72
DEPDC1B-202ENST00000453022 ASTN1O14525 1302 aa10.52□□□□□ -0.73
DEPDC1B-202ENST00000453022 ELP1O95163 1332 aa10.52□□□□□ -0.73
DEPDC1B-202ENST00000453022 TIMP1P01033 207 aa10.52□□□□□ -0.73
DEPDC1B-202ENST00000453022 TSPY3P0CV98 308 aa10.52□□□□□ -0.73
DEPDC1B-202ENST00000453022 TSPY8P0CW00 308 aa10.52□□□□□ -0.73
DEPDC1B-202ENST00000453022 BMP3P12645 472 aa10.52□□□□□ -0.73
DEPDC1B-202ENST00000453022 FOSL2P15408 326 aa10.52□□□□□ -0.73
DEPDC1B-202ENST00000453022 DNAJB2P25686 324 aa10.52□□□□□ -0.73
DEPDC1B-202ENST00000453022 GJA9P57773 515 aa10.52□□□□□ -0.73
DEPDC1B-202ENST00000453022 SLFN13Q68D06 897 aa10.52□□□□□ -0.73
DEPDC1B-202ENST00000453022 C16orf59Q7L2K0 433 aa10.52□□□□□ -0.73
DEPDC1B-202ENST00000453022 RASGRP2Q7LDG7 609 aa10.52□□□□□ -0.73
DEPDC1B-202ENST00000453022 FAM133AQ8N9E0 248 aa10.52□□□□□ -0.73
DEPDC1B-202ENST00000453022 GLT1D1Q96MS3 346 aa10.52□□□□□ -0.73
DEPDC1B-202ENST00000453022 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.52□□□□□ -0.731e-6■□□□□ 9.7
DEPDC1B-202ENST00000453022 ZNF287Q9HBT7 754 aa10.52□□□□□ -0.73
DEPDC1B-202ENST00000453022 FBXO40Q9UH90 709 aa10.52□□□□□ -0.73
DEPDC1B-202ENST00000453022 CTDP1Q9Y5B0 961 aaPredicted RBP10.52□□□□□ -0.73
DEPDC1B-202ENST00000453022 MROH7Q68CQ1 1323 aa10.51□□□□□ -0.73
DEPDC1B-202ENST00000453022 TTC41PQ6P2S7 1318 aa10.51□□□□□ -0.73
DEPDC1B-202ENST00000453022 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.51□□□□□ -0.73
DEPDC1B-202ENST00000453022 SOWAHBA6NEL2 793 aa10.51□□□□□ -0.73
DEPDC1B-202ENST00000453022 TMEM232C9JQI7 657 aa10.51□□□□□ -0.73
DEPDC1B-202ENST00000453022 PTGS1P23219 599 aa10.51□□□□□ -0.73
DEPDC1B-202ENST00000453022 STAT2P52630 851 aa10.51□□□□□ -0.73
DEPDC1B-202ENST00000453022 NKX3-2P78367 333 aa10.51□□□□□ -0.73
DEPDC1B-202ENST00000453022 TFAP4Q01664 338 aa10.51□□□□□ -0.73
DEPDC1B-202ENST00000453022 PPARAQ07869 468 aa10.51□□□□□ -0.73
DEPDC1B-202ENST00000453022 GRIN2CQ14957 1233 aa10.51□□□□□ -0.73
DEPDC1B-202ENST00000453022 ZMYM1Q5SVZ6 1142 aa10.51□□□□□ -0.73
DEPDC1B-202ENST00000453022 MFSD5Q6N075 450 aa10.51□□□□□ -0.73
DEPDC1B-202ENST00000453022 FAM126BQ8IXS8 530 aa10.51□□□□□ -0.73
DEPDC1B-202ENST00000453022 CHMP4CQ96CF2 233 aa10.51□□□□□ -0.73
DEPDC1B-202ENST00000453022 GMCL1Q96IK5 515 aa10.51□□□□□ -0.73
DEPDC1B-202ENST00000453022 AGBL1Q96MI9 1066 aa10.51□□□□□ -0.73
DEPDC1B-202ENST00000453022 ACAD9Q9H845 621 aa10.51□□□□□ -0.73
DEPDC1B-202ENST00000453022 A1CFQ9NQ94 594 aaKnown RBP10.51□□□□□ -0.73
DEPDC1B-202ENST00000453022 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.51□□□□□ -0.73
DEPDC1B-202ENST00000453022 DDX49Q9Y6V7 483 aaKnown RBP10.51□□□□□ -0.73
DEPDC1B-202ENST00000453022 SCN5AQ14524 2016 aa10.5□□□□□ -0.73
DEPDC1B-202ENST00000453022 A0A0U1RQG5 324 aaPredicted RBP10.5□□□□□ -0.73
DEPDC1B-202ENST00000453022 ARVCFO00192 962 aa10.5□□□□□ -0.73
DEPDC1B-202ENST00000453022 PDE4BQ07343 736 aa10.5□□□□□ -0.73
DEPDC1B-202ENST00000453022 GNASQ5JWF2 1037 aa10.5□□□□□ -0.73
DEPDC1B-202ENST00000453022 TMEM240Q5SV17 173 aa10.5□□□□□ -0.73
DEPDC1B-202ENST00000453022 RASIP1Q5U651 963 aa10.5□□□□□ -0.73
DEPDC1B-202ENST00000453022 USP38Q8NB14 1042 aa10.5□□□□□ -0.73
DEPDC1B-202ENST00000453022 PCSK9Q8NBP7 692 aaKnown RBP10.5□□□□□ -0.73
DEPDC1B-202ENST00000453022 FSD1Q9BTV5 496 aa10.5□□□□□ -0.73
DEPDC1B-202ENST00000453022 NACAP1Q9BZK3 213 aa10.5□□□□□ -0.73
DEPDC1B-202ENST00000453022 NAPBQ9H115 298 aa10.5□□□□□ -0.73
DEPDC1B-202ENST00000453022 RNF146Q9NTX7 359 aa10.5□□□□□ -0.73
DEPDC1B-202ENST00000453022 PCDHB15Q9Y5E8 787 aa10.5□□□□□ -0.73
DEPDC1B-202ENST00000453022 TANC1Q9C0D5 1861 aa10.5□□□□□ -0.73
DEPDC1B-202ENST00000453022 LAMA4Q16363 1823 aa10.5□□□□□ -0.73
DEPDC1B-202ENST00000453022 SALL3Q9BXA9 1300 aa10.49□□□□□ -0.73
DEPDC1B-202ENST00000453022 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.49□□□□□ -0.73
DEPDC1B-202ENST00000453022 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.49□□□□□ -0.73
DEPDC1B-202ENST00000453022 NMT2O60551 498 aa10.49□□□□□ -0.73
DEPDC1B-202ENST00000453022 CD4P01730 458 aa10.49□□□□□ -0.73
DEPDC1B-202ENST00000453022 FDX1P10109 184 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms