RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 SNAP25P60880 206 aa12.15□□□□□ -0.46
LINC01004-202ENST00000450686 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.15□□□□□ -0.46
LINC01004-202ENST00000450686 PDCD7Q8N8D1 485 aaKnown RBP12.15□□□□□ -0.46
LINC01004-202ENST00000450686 CEP95Q96GE4 821 aa12.15□□□□□ -0.46
LINC01004-202ENST00000450686 FGD4Q96M96 766 aa12.15□□□□□ -0.46
LINC01004-202ENST00000450686 OCEL1Q9H607 264 aa12.15□□□□□ -0.46
LINC01004-202ENST00000450686 HOMER2Q9NSB8 354 aa12.15□□□□□ -0.46
LINC01004-202ENST00000450686 ISY1Q9ULR0 285 aaKnown RBP12.15□□□□□ -0.46
LINC01004-202ENST00000450686 IGKV6D-41A0A0C4DH26 115 aa12.14□□□□□ -0.47
LINC01004-202ENST00000450686 RNF113AO15541 343 aaKnown RBP12.14□□□□□ -0.47
LINC01004-202ENST00000450686 SEC24BO95487 1268 aa12.14□□□□□ -0.47
LINC01004-202ENST00000450686 APPP05067 770 aa12.14□□□□□ -0.47
LINC01004-202ENST00000450686 CLTBP09497 229 aa12.14□□□□□ -0.47
LINC01004-202ENST00000450686 TDO2P48775 406 aa12.14□□□□□ -0.47
LINC01004-202ENST00000450686 FAM109BQ6ICB4 259 aaPredicted RBP12.14□□□□□ -0.47
LINC01004-202ENST00000450686 ZSCAN25Q6NSZ9 544 aa12.14□□□□□ -0.47
LINC01004-202ENST00000450686 KBTBD3Q8NAB2 608 aa12.14□□□□□ -0.47
LINC01004-202ENST00000450686 APPBP2Q92624 585 aa12.14□□□□□ -0.47
LINC01004-202ENST00000450686 TEX13BQ9BXU2 312 aa12.14□□□□□ -0.47
LINC01004-202ENST00000450686 SEMA6BQ9H3T3 888 aa12.14□□□□□ -0.47
LINC01004-202ENST00000450686 INCENPQ9NQS7 918 aa12.14□□□□□ -0.47
LINC01004-202ENST00000450686 ROBO3Q96MS0 1386 aa12.14□□□□□ -0.47
LINC01004-202ENST00000450686 MYO9BQ13459 2157 aa12.13□□□□□ -0.47
LINC01004-202ENST00000450686 AKR1A1P14550 325 aa12.13□□□□□ -0.47
LINC01004-202ENST00000450686 ACLYP53396 1101 aa12.13□□□□□ -0.47
LINC01004-202ENST00000450686 SBK1Q52WX2 424 aa12.13□□□□□ -0.47
LINC01004-202ENST00000450686 CCDC129Q6ZRS4 1044 aa12.13□□□□□ -0.47
LINC01004-202ENST00000450686 RNF180Q86T96 592 aa12.13□□□□□ -0.47
LINC01004-202ENST00000450686 DDX11Q96FC9 970 aa12.13□□□□□ -0.47
LINC01004-202ENST00000450686 RNPC3Q96LT9 517 aaKnown RBP12.13□□□□□ -0.47
LINC01004-202ENST00000450686 TMEM39AQ9NV64 488 aa12.13□□□□□ -0.47
LINC01004-202ENST00000450686 NYAP2Q9P242 653 aa12.13□□□□□ -0.47
LINC01004-202ENST00000450686 CNPY2Q9Y2B0 182 aa12.13□□□□□ -0.47
LINC01004-202ENST00000450686 CHD7Q9P2D1 2997 aa12.13□□□□□ -0.47
LINC01004-202ENST00000450686 REV3LO60673 3130 aa12.13□□□□□ -0.47
LINC01004-202ENST00000450686 LRRC37A2A6NM11 1700 aa12.12□□□□□ -0.47
LINC01004-202ENST00000450686 LCTP09848 1927 aa12.12□□□□□ -0.47
LINC01004-202ENST00000450686 DNAJC25-GNG10A0A024R161 153 aa12.12□□□□□ -0.47
LINC01004-202ENST00000450686 RBAK-RBAKDNI3L0D1 243 aa12.12□□□□□ -0.47
LINC01004-202ENST00000450686 RAG1P15918 1043 aa12.12□□□□□ -0.47
LINC01004-202ENST00000450686 CNTN2Q02246 1040 aa12.12□□□□□ -0.47
LINC01004-202ENST00000450686 FAAP100Q0VG06 881 aa12.12□□□□□ -0.47
LINC01004-202ENST00000450686 KCNA10Q16322 511 aa12.12□□□□□ -0.47
LINC01004-202ENST00000450686 MAFAQ8NHW3 353 aaPredicted RBP12.12□□□□□ -0.47
LINC01004-202ENST00000450686 STARD7Q9NQZ5 370 aa12.12□□□□□ -0.47
LINC01004-202ENST00000450686 MTMR7Q9Y216 660 aa12.12□□□□□ -0.47
LINC01004-202ENST00000450686 DIS3Q9Y2L1 958 aaKnown RBP12.12□□□□□ -0.47
LINC01004-202ENST00000450686 TACC3Q9Y6A5 838 aa12.12□□□□□ -0.47
LINC01004-202ENST00000450686 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.11□□□□□ -0.47
LINC01004-202ENST00000450686 GRXCR1A8MXD5 290 aa12.11□□□□□ -0.47
LINC01004-202ENST00000450686 KIAA0355O15063 1070 aa12.11□□□□□ -0.47
LINC01004-202ENST00000450686 NMT2O60551 498 aa12.11□□□□□ -0.47
LINC01004-202ENST00000450686 ZBED4O75132 1171 aa12.11□□□□□ -0.47
LINC01004-202ENST00000450686 C6orf222P0C671 652 aaPredicted RBP12.11□□□□□ -0.47
LINC01004-202ENST00000450686 BEX3Q00994 111 aa12.11□□□□□ -0.47
LINC01004-202ENST00000450686 ACVR2BQ13705 512 aa12.11□□□□□ -0.47
LINC01004-202ENST00000450686 CCDC144BQ3MJ40 725 aa12.11□□□□□ -0.47
LINC01004-202ENST00000450686 TMEM63BQ5T3F8 832 aa12.11□□□□□ -0.47
LINC01004-202ENST00000450686 C1orf53Q5VUE5 145 aa12.11□□□□□ -0.47
LINC01004-202ENST00000450686 SLFN13Q68D06 897 aa12.11□□□□□ -0.47
LINC01004-202ENST00000450686 IFNL3Q8IZI9 196 aa12.11□□□□□ -0.47
LINC01004-202ENST00000450686 ANKRD35Q8N283 1001 aa12.11□□□□□ -0.47
LINC01004-202ENST00000450686 PRPF38AQ8NAV1 312 aaKnown RBP12.11□□□□□ -0.47
LINC01004-202ENST00000450686 KLHDC9Q8NEP7 349 aa12.11□□□□□ -0.47
LINC01004-202ENST00000450686 AGBL1Q96MI9 1066 aa12.11□□□□□ -0.47
LINC01004-202ENST00000450686 PURBQ96QR8 312 aaKnown RBP12.11□□□□□ -0.47
LINC01004-202ENST00000450686 DCTPP1Q9H773 170 aa12.11□□□□□ -0.47
LINC01004-202ENST00000450686 SLC38A10Q9HBR0 1119 aa12.11□□□□□ -0.47
LINC01004-202ENST00000450686 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.11□□□□□ -0.47
LINC01004-202ENST00000450686 MTMR4Q9NYA4 1195 aa12.11□□□□□ -0.47
LINC01004-202ENST00000450686 NRBP1Q9UHY1 535 aa12.11□□□□□ -0.47
LINC01004-202ENST00000450686 CTDP1Q9Y5B0 961 aaPredicted RBP12.11□□□□□ -0.47
LINC01004-202ENST00000450686 TMEM232C9JQI7 657 aa12.1□□□□□ -0.47
LINC01004-202ENST00000450686 FOXP2O15409 715 aa12.1□□□□□ -0.47
LINC01004-202ENST00000450686 ACRP10323 421 aa12.1□□□□□ -0.47
LINC01004-202ENST00000450686 FPGSQ05932 587 aa12.1□□□□□ -0.47
LINC01004-202ENST00000450686 CTDSPL2Q05D32 466 aa12.1□□□□□ -0.47
LINC01004-202ENST00000450686 CCSAPQ6IQ19 270 aaPredicted RBP12.1□□□□□ -0.47
LINC01004-202ENST00000450686 CCDC174Q6PII3 467 aa12.1□□□□□ -0.47
LINC01004-202ENST00000450686 KCTD1Q719H9 257 aa12.1□□□□□ -0.47
LINC01004-202ENST00000450686 ARMCX2Q7L311 632 aa12.1□□□□□ -0.47
LINC01004-202ENST00000450686 CCDC144CPQ8IYA2 1237 aa12.1□□□□□ -0.47
LINC01004-202ENST00000450686 ZNF444Q8N0Y2 327 aaPredicted RBP12.1□□□□□ -0.47
LINC01004-202ENST00000450686 USP38Q8NB14 1042 aa12.1□□□□□ -0.47
LINC01004-202ENST00000450686 PI4K2BQ8TCG2 481 aa12.1□□□□□ -0.47
LINC01004-202ENST00000450686 VTI1AQ96AJ9 217 aa12.1□□□□□ -0.47
LINC01004-202ENST00000450686 GPATCH3Q96I76 525 aa12.1□□□□□ -0.47
LINC01004-202ENST00000450686 MFRPQ9BY79 579 aa12.1□□□□□ -0.47
LINC01004-202ENST00000450686 PPP1R12CQ9BZL4 782 aa12.1□□□□□ -0.47
LINC01004-202ENST00000450686 FAM184BQ9ULE4 1060 aa12.1□□□□□ -0.47
LINC01004-202ENST00000450686 PCDHB15Q9Y5E8 787 aa12.1□□□□□ -0.47
LINC01004-202ENST00000450686 GBF1Q92538 1859 aa12.1□□□□□ -0.47
LINC01004-202ENST00000450686 ASTN1O14525 1302 aa12.1□□□□□ -0.47
LINC01004-202ENST00000450686 SYNGAP1Q96PV0 1343 aa12.1□□□□□ -0.47
LINC01004-202ENST00000450686 MUC3AQ02505 3323 aa12.09□□□□□ -0.47
LINC01004-202ENST00000450686 POTEMA6NI47 508 aa12.09□□□□□ -0.47
LINC01004-202ENST00000450686 ASGR1P07306 291 aa12.09□□□□□ -0.47
LINC01004-202ENST00000450686 TSPY3P0CV98 308 aa12.09□□□□□ -0.47
LINC01004-202ENST00000450686 TSPY8P0CW00 308 aa12.09□□□□□ -0.47
LINC01004-202ENST00000450686 BMP3P12645 472 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms