RNA–Protein interactions for RNA: ENST00000449704.5

TOP3B-211, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-211ENST00000449704 STAG2Q8N3U4 1231 aa18.34■□□□□ 0.53
TOP3B-211ENST00000449704 NUP133Q8WUM0 1156 aa18.34■□□□□ 0.53
TOP3B-211ENST00000449704 TRIB2Q92519 343 aa18.34■□□□□ 0.53
TOP3B-211ENST00000449704 TCEANC2Q96MN5 208 aa18.34■□□□□ 0.53
TOP3B-211ENST00000449704 JAKMIP1Q96N16 626 aaKnown RBP18.34■□□□□ 0.53
TOP3B-211ENST00000449704 RANBP17Q9H2T7 1088 aaKnown RBP18.34■□□□□ 0.53
TOP3B-211ENST00000449704 VAT1LQ9HCJ6 419 aa18.34■□□□□ 0.53
TOP3B-211ENST00000449704 SLC5A4Q9NY91 659 aa18.34■□□□□ 0.53
TOP3B-211ENST00000449704 CCPG1Q9ULG6 757 aa18.34■□□□□ 0.53
TOP3B-211ENST00000449704 HTTP42858 3142 aa18.34■□□□□ 0.53
TOP3B-211ENST00000449704 EPB41L2O43491 1005 aaKnown RBP18.33■□□□□ 0.52
TOP3B-211ENST00000449704 COBLO75128 1261 aa18.33■□□□□ 0.52
TOP3B-211ENST00000449704 HMGCRP04035 888 aa18.33■□□□□ 0.52
TOP3B-211ENST00000449704 ICAM1P05362 532 aa18.33■□□□□ 0.52
TOP3B-211ENST00000449704 PGK2P07205 417 aa18.33■□□□□ 0.52
TOP3B-211ENST00000449704 TRMT44Q8IYL2 757 aaKnown RBP18.33■□□□□ 0.52
TOP3B-211ENST00000449704 CHST13Q8NET6 341 aa18.33■□□□□ 0.52
TOP3B-211ENST00000449704 NPLOC4Q8TAT6 608 aa18.33■□□□□ 0.52
TOP3B-211ENST00000449704 DDX11Q96FC9 970 aa18.33■□□□□ 0.52
TOP3B-211ENST00000449704 MYL10Q9BUA6 226 aa18.33■□□□□ 0.52
TOP3B-211ENST00000449704 TMEM106CQ9BVX2 250 aa18.33■□□□□ 0.52
TOP3B-211ENST00000449704 RNF146Q9NTX7 359 aa18.33■□□□□ 0.52
TOP3B-211ENST00000449704 FBXO40Q9UH90 709 aa18.33■□□□□ 0.52
TOP3B-211ENST00000449704 DOCK3Q8IZD9 2030 aa18.32■□□□□ 0.52
TOP3B-211ENST00000449704 KLRF2D3W0D1 207 aa18.32■□□□□ 0.52
TOP3B-211ENST00000449704 HMGB1P09429 215 aaKnown RBP18.32■□□□□ 0.52
TOP3B-211ENST00000449704 HOXC6P09630 235 aa18.32■□□□□ 0.52
TOP3B-211ENST00000449704 CPA1P15085 419 aa18.32■□□□□ 0.52
TOP3B-211ENST00000449704 TAL1P17542 331 aaPredicted RBP18.32■□□□□ 0.52
TOP3B-211ENST00000449704 LIFRP42702 1097 aa18.32■□□□□ 0.52
TOP3B-211ENST00000449704 FGD1P98174 961 aa18.32■□□□□ 0.52
TOP3B-211ENST00000449704 EXOSC10Q01780 885 aaKnown RBP18.32■□□□□ 0.52
TOP3B-211ENST00000449704 TROAPQ12815 778 aa18.32■□□□□ 0.52
TOP3B-211ENST00000449704 TRIM32Q13049 653 aa18.32■□□□□ 0.52
TOP3B-211ENST00000449704 GRM4Q14833 912 aa18.32■□□□□ 0.52
TOP3B-211ENST00000449704 TKFCQ3LXA3 575 aa18.32■□□□□ 0.52
TOP3B-211ENST00000449704 ADGRF4Q8IZF3 695 aa18.32■□□□□ 0.52
TOP3B-211ENST00000449704 ZNF654Q8IZM8 581 aa18.32■□□□□ 0.52
TOP3B-211ENST00000449704 ANKRD35Q8N283 1001 aa18.32■□□□□ 0.52
TOP3B-211ENST00000449704 TRERF1Q96PN7 1200 aa18.32■□□□□ 0.52
TOP3B-211ENST00000449704 ACAD9Q9H845 621 aa18.32■□□□□ 0.52
TOP3B-211ENST00000449704 MAD2L2Q9UI95 211 aa18.32■□□□□ 0.52
TOP3B-211ENST00000449704 A0A0G2JMZ2 1700 aa18.32■□□□□ 0.52
TOP3B-211ENST00000449704 MGAMO43451 1857 aa18.31■□□□□ 0.52
TOP3B-211ENST00000449704 PALM3A6NDB9 673 aaPredicted RBP18.31■□□□□ 0.52
TOP3B-211ENST00000449704 CCL5P13501 91 aa18.31■□□□□ 0.52
TOP3B-211ENST00000449704 BLOC1S2Q6QNY1 142 aa18.31■□□□□ 0.52
TOP3B-211ENST00000449704 RNF208Q9H0X6 261 aa18.31■□□□□ 0.52
TOP3B-211ENST00000449704 UNC93B1Q9H1C4 597 aa18.31■□□□□ 0.52
TOP3B-211ENST00000449704 FLRT1Q9NZU1 646 aa18.31■□□□□ 0.52
TOP3B-211ENST00000449704 SLC12A7Q9Y666 1083 aa18.31■□□□□ 0.52
TOP3B-211ENST00000449704 WDR19Q8NEZ3 1342 aa18.3■□□□□ 0.52
TOP3B-211ENST00000449704 DDAH1O94760 285 aa18.3■□□□□ 0.52
TOP3B-211ENST00000449704 PSMA5P28066 241 aa18.3■□□□□ 0.52
TOP3B-211ENST00000449704 CDC37Q16543 378 aaPredicted RBP18.3■□□□□ 0.52
TOP3B-211ENST00000449704 MFSD14CQ5VZR4 134 aa18.3■□□□□ 0.52
TOP3B-211ENST00000449704 SYNE3Q6ZMZ3 975 aa18.3■□□□□ 0.52
TOP3B-211ENST00000449704 RAB11FIP4Q86YS3 637 aa18.3■□□□□ 0.52
TOP3B-211ENST00000449704 CTCFLQ8NI51 663 aaPredicted RBP18.3■□□□□ 0.52
TOP3B-211ENST00000449704 POTEFA5A3E0 1075 aa18.29■□□□□ 0.52
TOP3B-211ENST00000449704 EIF5BO60841 1220 aaKnown RBP18.29■□□□□ 0.52
TOP3B-211ENST00000449704 PRKAR2AP13861 404 aaKnown RBP18.29■□□□□ 0.52
TOP3B-211ENST00000449704 CASTP20810 708 aaKnown RBP18.29■□□□□ 0.52
TOP3B-211ENST00000449704 KIF5BP33176 963 aa18.29■□□□□ 0.52
TOP3B-211ENST00000449704 MUM1L1Q5H9M0 696 aa18.29■□□□□ 0.52
TOP3B-211ENST00000449704 CCDC144CPQ8IYA2 1237 aa18.29■□□□□ 0.52
TOP3B-211ENST00000449704 JMJD4Q9H9V9 463 aa18.29■□□□□ 0.52
TOP3B-211ENST00000449704 PNMA2Q9UL42 364 aa18.29■□□□□ 0.52
TOP3B-211ENST00000449704 GTF3C3Q9Y5Q9 886 aa18.29■□□□□ 0.52
TOP3B-211ENST00000449704 PARP14Q460N5 1801 aa18.28■□□□□ 0.52
TOP3B-211ENST00000449704 CALM1P0DP23 149 aa18.28■□□□□ 0.52
TOP3B-211ENST00000449704 CALM2P0DP24 149 aa18.28■□□□□ 0.52
TOP3B-211ENST00000449704 CALM3P0DP25 149 aa18.28■□□□□ 0.52
TOP3B-211ENST00000449704 RXRAP19793 462 aa18.28■□□□□ 0.52
TOP3B-211ENST00000449704 CYP2C19P33261 490 aa18.28■□□□□ 0.52
TOP3B-211ENST00000449704 CACNB2Q08289 660 aaPredicted RBP18.28■□□□□ 0.52
TOP3B-211ENST00000449704 QRICH1Q2TAL8 776 aa18.28■□□□□ 0.52
TOP3B-211ENST00000449704 USH1GQ495M9 461 aa18.28■□□□□ 0.52
TOP3B-211ENST00000449704 NSMFQ6X4W1 530 aa18.28■□□□□ 0.52
TOP3B-211ENST00000449704 MAML3Q96JK9 1138 aa18.28■□□□□ 0.52
TOP3B-211ENST00000449704 MAP3K14Q99558 947 aa18.28■□□□□ 0.52
TOP3B-211ENST00000449704 HMX1Q9NP08 348 aaPredicted RBP18.28■□□□□ 0.52
TOP3B-211ENST00000449704 NAP1L2Q9ULW6 460 aaPredicted RBP18.28■□□□□ 0.52
TOP3B-211ENST00000449704 RPS6KB1P23443 525 aa18.27■□□□□ 0.52
TOP3B-211ENST00000449704 ZNF792Q3KQV3 632 aa18.27■□□□□ 0.52
TOP3B-211ENST00000449704 OLFML2BQ68BL8 750 aa18.27■□□□□ 0.52
TOP3B-211ENST00000449704 Q6ZUG5 572 aa18.27■□□□□ 0.52
TOP3B-211ENST00000449704 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.27■□□□□ 0.52
TOP3B-211ENST00000449704 SGMS1Q86VZ5 419 aa18.27■□□□□ 0.52
TOP3B-211ENST00000449704 MICU3Q86XE3 530 aa18.27■□□□□ 0.52
TOP3B-211ENST00000449704 HOMER1Q86YM7 354 aa18.27■□□□□ 0.52
TOP3B-211ENST00000449704 PIBF1Q8WXW3 757 aa18.27■□□□□ 0.52
TOP3B-211ENST00000449704 A1CFQ9NQ94 594 aaKnown RBP18.27■□□□□ 0.52
TOP3B-211ENST00000449704 RPTORQ8N122 1335 aa18.26■□□□□ 0.51
TOP3B-211ENST00000449704 COL11A1P12107 1806 aaPredicted RBP18.26■□□□□ 0.51
TOP3B-211ENST00000449704 KLF18A0A0U1RQI7 1052 aa18.26■□□□□ 0.51
TOP3B-211ENST00000449704 POTEB2H3BUK9 544 aa18.26■□□□□ 0.51
TOP3B-211ENST00000449704 SEC24BO95487 1268 aa18.26■□□□□ 0.51
TOP3B-211ENST00000449704 EN2P19622 333 aaPredicted RBP18.26■□□□□ 0.51
TOP3B-211ENST00000449704 GNAQP50148 359 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms