RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 KLRF2D3W0D1 207 aa16.34■□□□□ 0.21
GTF3C3-206ENST00000448539 CALM1P0DP23 149 aa16.34■□□□□ 0.21
GTF3C3-206ENST00000448539 CALM2P0DP24 149 aa16.34■□□□□ 0.21
GTF3C3-206ENST00000448539 CALM3P0DP25 149 aa16.34■□□□□ 0.21
GTF3C3-206ENST00000448539 CASTP20810 708 aaKnown RBP16.34■□□□□ 0.21
GTF3C3-206ENST00000448539 EXOSC10Q01780 885 aaKnown RBP16.34■□□□□ 0.21
GTF3C3-206ENST00000448539 MAP2K5Q13163 448 aa16.34■□□□□ 0.21
GTF3C3-206ENST00000448539 GRB14Q14449 540 aa16.34■□□□□ 0.21
GTF3C3-206ENST00000448539 KCTD2Q14681 263 aa16.34■□□□□ 0.21
GTF3C3-206ENST00000448539 GRM4Q14833 912 aa16.34■□□□□ 0.21
GTF3C3-206ENST00000448539 TKFCQ3LXA3 575 aa16.34■□□□□ 0.21
GTF3C3-206ENST00000448539 MORN1Q5T089 497 aa16.34■□□□□ 0.21
GTF3C3-206ENST00000448539 DPP9Q86TI2 863 aa16.34■□□□□ 0.21
GTF3C3-206ENST00000448539 ZNF654Q8IZM8 581 aa16.34■□□□□ 0.21
GTF3C3-206ENST00000448539 CTCFLQ8NI51 663 aaPredicted RBP16.34■□□□□ 0.21
GTF3C3-206ENST00000448539 PXYLP1Q8TE99 480 aa16.34■□□□□ 0.21
GTF3C3-206ENST00000448539 AGBL1Q96MI9 1066 aa16.34■□□□□ 0.21
GTF3C3-206ENST00000448539 MMP19Q99542 508 aa16.34■□□□□ 0.21
GTF3C3-206ENST00000448539 SLC5A4Q9NY91 659 aa16.34■□□□□ 0.21
GTF3C3-206ENST00000448539 CCPG1Q9ULG6 757 aa16.34■□□□□ 0.21
GTF3C3-206ENST00000448539 PARP14Q460N5 1801 aa16.33■□□□□ 0.21
GTF3C3-206ENST00000448539 XRCC5P13010 732 aaKnown RBP16.33■□□□□ 0.2
GTF3C3-206ENST00000448539 ALAS1P13196 640 aa16.33■□□□□ 0.2
GTF3C3-206ENST00000448539 ADORA2AP29274 412 aa16.33■□□□□ 0.2
GTF3C3-206ENST00000448539 KIF5BP33176 963 aa16.33■□□□□ 0.2
GTF3C3-206ENST00000448539 UBXN2AP68543 259 aa16.33■□□□□ 0.2
GTF3C3-206ENST00000448539 TROAPQ12815 778 aa16.33■□□□□ 0.2
GTF3C3-206ENST00000448539 COL9A3Q14050 684 aaPredicted RBP16.33■□□□□ 0.2
GTF3C3-206ENST00000448539 TRMT44Q8IYL2 757 aaKnown RBP16.33■□□□□ 0.2
GTF3C3-206ENST00000448539 ADGRF4Q8IZF3 695 aa16.33■□□□□ 0.2
GTF3C3-206ENST00000448539 ABRAQ8N0Z2 381 aa16.33■□□□□ 0.2
GTF3C3-206ENST00000448539 CHST13Q8NET6 341 aa16.33■□□□□ 0.2
GTF3C3-206ENST00000448539 SH3TC2Q8TF17 1288 aa16.33■□□□□ 0.2
GTF3C3-206ENST00000448539 APBA2Q99767 749 aa16.33■□□□□ 0.2
GTF3C3-206ENST00000448539 MYL10Q9BUA6 226 aa16.33■□□□□ 0.2
GTF3C3-206ENST00000448539 VAT1LQ9HCJ6 419 aa16.33■□□□□ 0.2
GTF3C3-206ENST00000448539 HOMER2Q9NSB8 354 aa16.33■□□□□ 0.2
GTF3C3-206ENST00000448539 MAD2L2Q9UI95 211 aa16.33■□□□□ 0.2
GTF3C3-206ENST00000448539 PALM3A6NDB9 673 aaPredicted RBP16.32■□□□□ 0.2
GTF3C3-206ENST00000448539 ICAM1P05362 532 aa16.32■□□□□ 0.2
GTF3C3-206ENST00000448539 CPA1P15085 419 aa16.32■□□□□ 0.2
GTF3C3-206ENST00000448539 ELNP15502 786 aa16.32■□□□□ 0.2
GTF3C3-206ENST00000448539 RPS6KB1P23443 525 aa16.32■□□□□ 0.2
GTF3C3-206ENST00000448539 GNAQP50148 359 aa16.32■□□□□ 0.2
GTF3C3-206ENST00000448539 SGMS1Q86VZ5 419 aa16.32■□□□□ 0.2
GTF3C3-206ENST00000448539 STAG2Q8N3U4 1231 aa16.32■□□□□ 0.2
GTF3C3-206ENST00000448539 DDX11Q96FC9 970 aa16.32■□□□□ 0.2
GTF3C3-206ENST00000448539 MAP3K14Q99558 947 aa16.32■□□□□ 0.2
GTF3C3-206ENST00000448539 CPVLQ9H3G5 476 aa16.32■□□□□ 0.2
GTF3C3-206ENST00000448539 RIPK3Q9Y572 518 aa16.32■□□□□ 0.2
GTF3C3-206ENST00000448539 CYP46A1Q9Y6A2 500 aa16.32■□□□□ 0.2
GTF3C3-206ENST00000448539 ZNF536O15090 1300 aa16.31■□□□□ 0.2
GTF3C3-206ENST00000448539 CDC37Q16543 378 aaPredicted RBP16.31■□□□□ 0.2
GTF3C3-206ENST00000448539 C8orf34Q49A92 452 aa16.31■□□□□ 0.2
GTF3C3-206ENST00000448539 Q6ZUG5 572 aa16.31■□□□□ 0.2
GTF3C3-206ENST00000448539 RUFY3Q7L099 469 aa16.31■□□□□ 0.2
GTF3C3-206ENST00000448539 ANKRD35Q8N283 1001 aa16.31■□□□□ 0.2
GTF3C3-206ENST00000448539 USP6NLQ92738 828 aa16.31■□□□□ 0.2
GTF3C3-206ENST00000448539 ARMC5Q96C12 935 aa16.31■□□□□ 0.2
GTF3C3-206ENST00000448539 TRERF1Q96PN7 1200 aa16.31■□□□□ 0.2
GTF3C3-206ENST00000448539 ACAD9Q9H845 621 aa16.31■□□□□ 0.2
GTF3C3-206ENST00000448539 RNF146Q9NTX7 359 aa16.31■□□□□ 0.2
GTF3C3-206ENST00000448539 NAP1L2Q9ULW6 460 aaPredicted RBP16.31■□□□□ 0.2
GTF3C3-206ENST00000448539 BRCA2P51587 3418 aa16.31■□□□□ 0.2
GTF3C3-206ENST00000448539 HMGCRP04035 888 aa16.3■□□□□ 0.2
GTF3C3-206ENST00000448539 ANAPC15P60006 121 aa16.3■□□□□ 0.2
GTF3C3-206ENST00000448539 MICU3Q86XE3 530 aa16.3■□□□□ 0.2
GTF3C3-206ENST00000448539 LZTS2Q9BRK4 669 aa16.3■□□□□ 0.2
GTF3C3-206ENST00000448539 TM6SF1Q9BZW5 370 aa16.3■□□□□ 0.2
GTF3C3-206ENST00000448539 COL11A1P12107 1806 aaPredicted RBP16.3■□□□□ 0.2
GTF3C3-206ENST00000448539 KLF18A0A0U1RQI7 1052 aa16.29■□□□□ 0.2
GTF3C3-206ENST00000448539 ZBTB43O43298 467 aa16.29■□□□□ 0.2
GTF3C3-206ENST00000448539 SEC24BO95487 1268 aa16.29■□□□□ 0.2
GTF3C3-206ENST00000448539 MYCP01106 439 aaPredicted RBP16.29■□□□□ 0.2
GTF3C3-206ENST00000448539 INHAP05111 366 aa16.29■□□□□ 0.2
GTF3C3-206ENST00000448539 HOXC6P09630 235 aa16.29■□□□□ 0.2
GTF3C3-206ENST00000448539 RXRAP19793 462 aa16.29■□□□□ 0.2
GTF3C3-206ENST00000448539 MFSD14CQ5VZR4 134 aa16.29■□□□□ 0.2
GTF3C3-206ENST00000448539 RAB11FIP4Q86YS3 637 aa16.29■□□□□ 0.2
GTF3C3-206ENST00000448539 CCDC144CPQ8IYA2 1237 aa16.29■□□□□ 0.2
GTF3C3-206ENST00000448539 TRIB2Q92519 343 aa16.29■□□□□ 0.2
GTF3C3-206ENST00000448539 BRF1Q92994 677 aa16.29■□□□□ 0.2
GTF3C3-206ENST00000448539 ZNF333Q96JL9 665 aa16.29■□□□□ 0.2
GTF3C3-206ENST00000448539 TMEM106CQ9BVX2 250 aa16.29■□□□□ 0.2
GTF3C3-206ENST00000448539 JMJD4Q9H9V9 463 aa16.29■□□□□ 0.2
GTF3C3-206ENST00000448539 ZSWIM6Q9HCJ5 1215 aa16.29■□□□□ 0.2
GTF3C3-206ENST00000448539 POTEFA5A3E0 1075 aa16.28■□□□□ 0.2
GTF3C3-206ENST00000448539 COBLO75128 1261 aa16.28■□□□□ 0.2
GTF3C3-206ENST00000448539 PGK2P07205 417 aa16.28■□□□□ 0.2
GTF3C3-206ENST00000448539 TRAF1Q13077 416 aa16.28■□□□□ 0.2
GTF3C3-206ENST00000448539 QRICH1Q2TAL8 776 aa16.28■□□□□ 0.2
GTF3C3-206ENST00000448539 USH1GQ495M9 461 aa16.28■□□□□ 0.2
GTF3C3-206ENST00000448539 APOA5Q6Q788 366 aa16.28■□□□□ 0.2
GTF3C3-206ENST00000448539 FBXO11Q86XK2 927 aa16.28■□□□□ 0.2
GTF3C3-206ENST00000448539 HOMER1Q86YM7 354 aa16.28■□□□□ 0.2
GTF3C3-206ENST00000448539 FANCBQ8NB91 859 aa16.28■□□□□ 0.2
GTF3C3-206ENST00000448539 NPLOC4Q8TAT6 608 aa16.28■□□□□ 0.2
GTF3C3-206ENST00000448539 UPF3BQ9BZI7 483 aaKnown RBP16.28■□□□□ 0.2
GTF3C3-206ENST00000448539 UPF2Q9HAU5 1272 aaKnown RBP16.28■□□□□ 0.2
GTF3C3-206ENST00000448539 RBM28Q9NW13 759 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms