RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 TRIB2Q92519 343 aa20.37■□□□□ 0.85
SMARCAL1-209ENST00000444508 AGBL1Q96MI9 1066 aa20.37■□□□□ 0.85
SMARCAL1-209ENST00000444508 UBA5Q9GZZ9 404 aa20.37■□□□□ 0.85
SMARCAL1-209ENST00000444508 SENP2Q9HC62 589 aa20.37■□□□□ 0.85
SMARCAL1-209ENST00000444508 HOMER2Q9NSB8 354 aa20.37■□□□□ 0.85
SMARCAL1-209ENST00000444508 PNMA2Q9UL42 364 aa20.37■□□□□ 0.85
SMARCAL1-209ENST00000444508 CCPG1Q9ULG6 757 aa20.37■□□□□ 0.85
SMARCAL1-209ENST00000444508 CENPFP49454 3210 aa20.36■□□□□ 0.85
SMARCAL1-209ENST00000444508 ZNF536O15090 1300 aa20.36■□□□□ 0.85
SMARCAL1-209ENST00000444508 DHX16O60231 1041 aaKnown RBP20.36■□□□□ 0.85
SMARCAL1-209ENST00000444508 ICAM1P05362 532 aa20.36■□□□□ 0.85
SMARCAL1-209ENST00000444508 ADCK5Q3MIX3 580 aa20.36■□□□□ 0.85
SMARCAL1-209ENST00000444508 DHX32Q7L7V1 743 aaKnown RBP20.36■□□□□ 0.85
SMARCAL1-209ENST00000444508 ACAD9Q9H845 621 aa20.36■□□□□ 0.85
SMARCAL1-209ENST00000444508 SNX14Q9Y5W7 946 aa20.36■□□□□ 0.85
SMARCAL1-209ENST00000444508 ALAS1P13196 640 aa20.35■□□□□ 0.85
SMARCAL1-209ENST00000444508 LIFRP42702 1097 aa20.35■□□□□ 0.85
SMARCAL1-209ENST00000444508 GRM4Q14833 912 aa20.35■□□□□ 0.85
SMARCAL1-209ENST00000444508 CCL14Q16627 93 aa20.35■□□□□ 0.85
SMARCAL1-209ENST00000444508 ANKRD35Q8N283 1001 aa20.35■□□□□ 0.85
SMARCAL1-209ENST00000444508 DDX11Q96FC9 970 aa20.35■□□□□ 0.85
SMARCAL1-209ENST00000444508 JAKMIP1Q96N16 626 aaKnown RBP20.35■□□□□ 0.85
SMARCAL1-209ENST00000444508 USP26Q9BXU7 913 aa20.35■□□□□ 0.85
SMARCAL1-209ENST00000444508 LRRC2Q9BYS8 371 aa20.35■□□□□ 0.85
SMARCAL1-209ENST00000444508 CPVLQ9H3G5 476 aa20.35■□□□□ 0.85
SMARCAL1-209ENST00000444508 GPHNQ9NQX3 736 aaPredicted RBP20.35■□□□□ 0.85
SMARCAL1-209ENST00000444508 RNF146Q9NTX7 359 aa20.35■□□□□ 0.85
SMARCAL1-209ENST00000444508 ZNFX1Q9P2E3 1918 aaKnown RBP20.34■□□□□ 0.85
SMARCAL1-209ENST00000444508 KLRF2D3W0D1 207 aa20.34■□□□□ 0.85
SMARCAL1-209ENST00000444508 COBLO75128 1261 aa20.34■□□□□ 0.85
SMARCAL1-209ENST00000444508 DDAH1O94760 285 aa20.34■□□□□ 0.85
SMARCAL1-209ENST00000444508 CCL5P13501 91 aa20.34■□□□□ 0.85
SMARCAL1-209ENST00000444508 PSMA5P28066 241 aa20.34■□□□□ 0.85
SMARCAL1-209ENST00000444508 TROAPQ12815 778 aa20.34■□□□□ 0.85
SMARCAL1-209ENST00000444508 COL9A3Q14050 684 aaPredicted RBP20.34■□□□□ 0.85
SMARCAL1-209ENST00000444508 MTFR1Q15390 333 aa20.34■□□□□ 0.85
SMARCAL1-209ENST00000444508 MFSD14CQ5VZR4 134 aa20.34■□□□□ 0.85
SMARCAL1-209ENST00000444508 ADGRF4Q8IZF3 695 aa20.34■□□□□ 0.85
SMARCAL1-209ENST00000444508 ZNF654Q8IZM8 581 aa20.34■□□□□ 0.85
SMARCAL1-209ENST00000444508 NPLOC4Q8TAT6 608 aa20.34■□□□□ 0.85
SMARCAL1-209ENST00000444508 NUP133Q8WUM0 1156 aa20.34■□□□□ 0.85
SMARCAL1-209ENST00000444508 TRERF1Q96PN7 1200 aa20.34■□□□□ 0.85
SMARCAL1-209ENST00000444508 RNF208Q9H0X6 261 aa20.34■□□□□ 0.85
SMARCAL1-209ENST00000444508 MAD2L2Q9UI95 211 aa20.34■□□□□ 0.85
SMARCAL1-209ENST00000444508 PALM3A6NDB9 673 aaPredicted RBP20.33■□□□□ 0.85
SMARCAL1-209ENST00000444508 PGK2P07205 417 aa20.33■□□□□ 0.85
SMARCAL1-209ENST00000444508 FGD1P98174 961 aa20.33■□□□□ 0.85
SMARCAL1-209ENST00000444508 EXOSC10Q01780 885 aaKnown RBP20.33■□□□□ 0.85
SMARCAL1-209ENST00000444508 BLOC1S2Q6QNY1 142 aa20.33■□□□□ 0.85
SMARCAL1-209ENST00000444508 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.33■□□□□ 0.85
SMARCAL1-209ENST00000444508 STAG2Q8N3U4 1231 aa20.33■□□□□ 0.85
SMARCAL1-209ENST00000444508 CTCFLQ8NI51 663 aaPredicted RBP20.33■□□□□ 0.85
SMARCAL1-209ENST00000444508 MAP3K14Q99558 947 aa20.33■□□□□ 0.85
SMARCAL1-209ENST00000444508 VAT1LQ9HCJ6 419 aa20.33■□□□□ 0.85
SMARCAL1-209ENST00000444508 SLC12A7Q9Y666 1083 aa20.33■□□□□ 0.85
SMARCAL1-209ENST00000444508 RBBP6Q7Z6E9 1792 aaKnown RBP20.32■□□□□ 0.84
SMARCAL1-209ENST00000444508 CALM1P0DP23 149 aa20.32■□□□□ 0.84
SMARCAL1-209ENST00000444508 CALM2P0DP24 149 aa20.32■□□□□ 0.84
SMARCAL1-209ENST00000444508 CALM3P0DP25 149 aa20.32■□□□□ 0.84
SMARCAL1-209ENST00000444508 PRKAR2AP13861 404 aaKnown RBP20.32■□□□□ 0.84
SMARCAL1-209ENST00000444508 KIF5BP33176 963 aa20.32■□□□□ 0.84
SMARCAL1-209ENST00000444508 TRIM32Q13049 653 aa20.32■□□□□ 0.84
SMARCAL1-209ENST00000444508 CDC37Q16543 378 aaPredicted RBP20.32■□□□□ 0.84
SMARCAL1-209ENST00000444508 OLFML2BQ68BL8 750 aa20.32■□□□□ 0.84
SMARCAL1-209ENST00000444508 SYNE3Q6ZMZ3 975 aa20.32■□□□□ 0.84
SMARCAL1-209ENST00000444508 TCEANC2Q96MN5 208 aa20.32■□□□□ 0.84
SMARCAL1-209ENST00000444508 UNC93B1Q9H1C4 597 aa20.32■□□□□ 0.84
SMARCAL1-209ENST00000444508 FLRT1Q9NZU1 646 aa20.32■□□□□ 0.84
SMARCAL1-209ENST00000444508 KIAA0100Q14667 2235 aaKnown RBP20.32■□□□□ 0.84
SMARCAL1-209ENST00000444508 SGMS1Q86VZ5 419 aa20.31■□□□□ 0.84
SMARCAL1-209ENST00000444508 MAML3Q96JK9 1138 aa20.31■□□□□ 0.84
SMARCAL1-209ENST00000444508 MYL10Q9BUA6 226 aa20.31■□□□□ 0.84
SMARCAL1-209ENST00000444508 JMJD4Q9H9V9 463 aa20.31■□□□□ 0.84
SMARCAL1-209ENST00000444508 HMX1Q9NP08 348 aaPredicted RBP20.31■□□□□ 0.84
SMARCAL1-209ENST00000444508 DIS3Q9Y2L1 958 aaKnown RBP20.31■□□□□ 0.84
SMARCAL1-209ENST00000444508 PLXNA1Q9UIW2 1896 aa20.3■□□□□ 0.84
SMARCAL1-209ENST00000444508 PFASO15067 1338 aa20.3■□□□□ 0.84
SMARCAL1-209ENST00000444508 RPTORQ8N122 1335 aa20.3■□□□□ 0.84
SMARCAL1-209ENST00000444508 CASTP20810 708 aaKnown RBP20.3■□□□□ 0.84
SMARCAL1-209ENST00000444508 CACNB2Q08289 660 aaPredicted RBP20.3■□□□□ 0.84
SMARCAL1-209ENST00000444508 ZNF792Q3KQV3 632 aa20.3■□□□□ 0.84
SMARCAL1-209ENST00000444508 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.3■□□□□ 0.84
SMARCAL1-209ENST00000444508 GJB1P08034 283 aa20.29■□□□□ 0.84
SMARCAL1-209ENST00000444508 CPA1P15085 419 aa20.29■□□□□ 0.84
SMARCAL1-209ENST00000444508 TAL1P17542 331 aaPredicted RBP20.29■□□□□ 0.84
SMARCAL1-209ENST00000444508 RPS6KB1P23443 525 aa20.29■□□□□ 0.84
SMARCAL1-209ENST00000444508 CYP2C19P33261 490 aa20.29■□□□□ 0.84
SMARCAL1-209ENST00000444508 GNAQP50148 359 aa20.29■□□□□ 0.84
SMARCAL1-209ENST00000444508 QRICH1Q2TAL8 776 aa20.29■□□□□ 0.84
SMARCAL1-209ENST00000444508 USH1GQ495M9 461 aa20.29■□□□□ 0.84
SMARCAL1-209ENST00000444508 MUM1L1Q5H9M0 696 aa20.29■□□□□ 0.84
SMARCAL1-209ENST00000444508 MAP3K21Q5TCX8 1036 aa20.29■□□□□ 0.84
SMARCAL1-209ENST00000444508 NSMFQ6X4W1 530 aa20.29■□□□□ 0.84
SMARCAL1-209ENST00000444508 LZTS2Q9BRK4 669 aa20.29■□□□□ 0.84
SMARCAL1-209ENST00000444508 A1CFQ9NQ94 594 aaKnown RBP20.29■□□□□ 0.84
SMARCAL1-209ENST00000444508 MYH6P13533 1939 aa20.29■□□□□ 0.84
SMARCAL1-209ENST00000444508 DNAJC25-GNG10A0A024R161 153 aa20.28■□□□□ 0.84
SMARCAL1-209ENST00000444508 POTEFA5A3E0 1075 aa20.28■□□□□ 0.84
SMARCAL1-209ENST00000444508 POTEB2H3BUK9 544 aa20.28■□□□□ 0.84
SMARCAL1-209ENST00000444508 MICU3Q86XE3 530 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms