RNA–Protein interactions for RNA: ENST00000443187.1

PRKD3-203, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-203ENST00000443187 CCDC136Q96JN2 1154 aa13.16□□□□□ -0.3
PRKD3-203ENST00000443187 RANBP17Q9H2T7 1088 aaKnown RBP13.16□□□□□ -0.3
PRKD3-203ENST00000443187 HOMER2Q9NSB8 354 aa13.16□□□□□ -0.3
PRKD3-203ENST00000443187 RBM8AQ9Y5S9 174 aaKnown RBP13.16□□□□□ -0.3
PRKD3-203ENST00000443187 DDX49Q9Y6V7 483 aaKnown RBP13.16□□□□□ -0.3
PRKD3-203ENST00000443187 U3KPZ7 1027 aaPredicted RBP13.16□□□□□ -0.3
PRKD3-203ENST00000443187 ALPK3Q96L96 1907 aa13.15□□□□□ -0.3
PRKD3-203ENST00000443187 CEP290O15078 2479 aa13.15□□□□□ -0.3
PRKD3-203ENST00000443187 E7EWF7 191 aa13.15□□□□□ -0.3
PRKD3-203ENST00000443187 COPB2P35606 906 aa13.15□□□□□ -0.3
PRKD3-203ENST00000443187 SYDE2Q5VT97 1194 aa13.15□□□□□ -0.3
PRKD3-203ENST00000443187 ANO1Q5XXA6 986 aa13.15□□□□□ -0.3
PRKD3-203ENST00000443187 PNMA1Q8ND90 353 aa13.15□□□□□ -0.3
PRKD3-203ENST00000443187 KRT23Q9C075 422 aa13.15□□□□□ -0.3
PRKD3-203ENST00000443187 RNF146Q9NTX7 359 aa13.15□□□□□ -0.3
PRKD3-203ENST00000443187 DNAH12Q6ZR08 3092 aa13.15□□□□□ -0.3
PRKD3-203ENST00000443187 ASTN1O14525 1302 aa13.14□□□□□ -0.31
PRKD3-203ENST00000443187 PFASO15067 1338 aa13.14□□□□□ -0.31
PRKD3-203ENST00000443187 FDX1P10109 184 aa13.14□□□□□ -0.31
PRKD3-203ENST00000443187 CNGA1P29973 690 aa13.14□□□□□ -0.31
PRKD3-203ENST00000443187 ANTXR2P58335 489 aa13.14□□□□□ -0.31
PRKD3-203ENST00000443187 CNTN2Q02246 1040 aa13.14□□□□□ -0.31
PRKD3-203ENST00000443187 PRPF38BQ5VTL8 546 aaKnown RBP13.14□□□□□ -0.31
PRKD3-203ENST00000443187 CHST3Q7LGC8 479 aa13.14□□□□□ -0.31
PRKD3-203ENST00000443187 IQCA1Q86XH1 822 aa13.14□□□□□ -0.31
PRKD3-203ENST00000443187 CHST13Q8NET6 341 aa13.14□□□□□ -0.31
PRKD3-203ENST00000443187 PURBQ96QR8 312 aaKnown RBP13.14□□□□□ -0.31
PRKD3-203ENST00000443187 TINF2Q9BSI4 451 aa13.14□□□□□ -0.31
PRKD3-203ENST00000443187 UBA5Q9GZZ9 404 aa13.14□□□□□ -0.31
PRKD3-203ENST00000443187 CNNM2Q9H8M5 875 aa13.14□□□□□ -0.31
PRKD3-203ENST00000443187 A1CFQ9NQ94 594 aaKnown RBP13.14□□□□□ -0.31
PRKD3-203ENST00000443187 PCDH10Q9P2E7 1040 aa13.14□□□□□ -0.31
PRKD3-203ENST00000443187 DDX20Q9UHI6 824 aaKnown RBP13.14□□□□□ -0.31
PRKD3-203ENST00000443187 DIS3Q9Y2L1 958 aaKnown RBP13.14□□□□□ -0.31
PRKD3-203ENST00000443187 CTDP1Q9Y5B0 961 aaPredicted RBP13.14□□□□□ -0.31
PRKD3-203ENST00000443187 LCTP09848 1927 aa13.13□□□□□ -0.31
PRKD3-203ENST00000443187 SOWAHBA6NEL2 793 aa13.13□□□□□ -0.31
PRKD3-203ENST00000443187 SNAI1O95863 264 aaPredicted RBP13.13□□□□□ -0.31
PRKD3-203ENST00000443187 ICAM1P05362 532 aa13.13□□□□□ -0.31
PRKD3-203ENST00000443187 ZNF865P0CJ78 1059 aaPredicted RBP13.13□□□□□ -0.31
PRKD3-203ENST00000443187 COL6A1P12109 1028 aa13.13□□□□□ -0.31
PRKD3-203ENST00000443187 ALAS1P13196 640 aa13.13□□□□□ -0.31
PRKD3-203ENST00000443187 SLC35G1Q2M3R5 365 aa13.13□□□□□ -0.31
PRKD3-203ENST00000443187 MB21D2Q8IYB1 491 aaPredicted RBP13.13□□□□□ -0.31
PRKD3-203ENST00000443187 STAG2Q8N3U4 1231 aa13.13□□□□□ -0.31
PRKD3-203ENST00000443187 ANKLE1Q8NAG6 615 aa13.13□□□□□ -0.31
PRKD3-203ENST00000443187 LENG1Q96BZ8 264 aaPredicted RBP13.13□□□□□ -0.31
PRKD3-203ENST00000443187 DDX11Q96FC9 970 aa13.13□□□□□ -0.31
PRKD3-203ENST00000443187 TRERF1Q96PN7 1200 aa13.13□□□□□ -0.31
PRKD3-203ENST00000443187 KAT14Q9H8E8 782 aa13.13□□□□□ -0.31
PRKD3-203ENST00000443187 GPHNQ9NQX3 736 aaPredicted RBP13.13□□□□□ -0.31
PRKD3-203ENST00000443187 H0YGN5 161 aa13.12□□□□□ -0.31
PRKD3-203ENST00000443187 NFIBO00712 420 aa13.12□□□□□ -0.31
PRKD3-203ENST00000443187 SLC27A2O14975 620 aa13.12□□□□□ -0.31
PRKD3-203ENST00000443187 SEPT4O43236 478 aa13.12□□□□□ -0.31
PRKD3-203ENST00000443187 NT5C2P49902 561 aa13.12□□□□□ -0.31
PRKD3-203ENST00000443187 NECTIN1Q15223 517 aa13.12□□□□□ -0.31
PRKD3-203ENST00000443187 MAMDC4Q6UXC1 1216 aa13.12□□□□□ -0.31
PRKD3-203ENST00000443187 ANKRD35Q8N283 1001 aa13.12□□□□□ -0.31
PRKD3-203ENST00000443187 FAM133AQ8N9E0 248 aa13.12□□□□□ -0.31
PRKD3-203ENST00000443187 CLEC4DQ8WXI8 215 aa13.12□□□□□ -0.31
PRKD3-203ENST00000443187 ACAD9Q9H845 621 aa13.12□□□□□ -0.31
PRKD3-203ENST00000443187 SLC5A4Q9NY91 659 aa13.12□□□□□ -0.31
PRKD3-203ENST00000443187 FBXO40Q9UH90 709 aa13.12□□□□□ -0.31
PRKD3-203ENST00000443187 CCPG1Q9ULG6 757 aa13.12□□□□□ -0.31
PRKD3-203ENST00000443187 RANBP2P49792 3224 aaKnown RBP13.12□□□□□ -0.31
PRKD3-203ENST00000443187 MCM3APO60318 1980 aa13.11□□□□□ -0.31
PRKD3-203ENST00000443187 ADCY6O43306 1168 aa13.11□□□□□ -0.31
PRKD3-203ENST00000443187 CCDC178Q5BJE1 867 aa13.11□□□□□ -0.31
PRKD3-203ENST00000443187 IFIT1BQ5T764 474 aaKnown RBP13.11□□□□□ -0.31
PRKD3-203ENST00000443187 NECAB2Q7Z6G3 386 aa13.11□□□□□ -0.31
PRKD3-203ENST00000443187 UBAC1Q9BSL1 405 aa13.11□□□□□ -0.31
PRKD3-203ENST00000443187 KATNBL1Q9H079 304 aa13.11□□□□□ -0.31
PRKD3-203ENST00000443187 CAPN2P17655 700 aa13.1□□□□□ -0.31
PRKD3-203ENST00000443187 IRX5P78411 483 aaPredicted RBP13.1□□□□□ -0.31
PRKD3-203ENST00000443187 TKFCQ3LXA3 575 aa13.1□□□□□ -0.31
PRKD3-203ENST00000443187 GPATCH4Q5T3I0 446 aaKnown RBP13.1□□□□□ -0.31
PRKD3-203ENST00000443187 GJC2Q5T442 439 aaPredicted RBP13.1□□□□□ -0.31
PRKD3-203ENST00000443187 CREB3L3Q68CJ9 461 aa13.1□□□□□ -0.31
PRKD3-203ENST00000443187 ZNF467Q7Z7K2 595 aaPredicted RBP13.1□□□□□ -0.31
PRKD3-203ENST00000443187 ADGRF4Q8IZF3 695 aa13.1□□□□□ -0.31
PRKD3-203ENST00000443187 NCOA7Q8NI08 942 aa13.1□□□□□ -0.31
PRKD3-203ENST00000443187 IGDCC4Q8TDY8 1250 aa13.1□□□□□ -0.31
PRKD3-203ENST00000443187 DPF3Q92784 378 aa13.1□□□□□ -0.31
PRKD3-203ENST00000443187 C11orf49Q9H6J7 331 aa13.1□□□□□ -0.31
PRKD3-203ENST00000443187 ANO2Q9NQ90 1003 aa13.1□□□□□ -0.31
PRKD3-203ENST00000443187 CYP39A1Q9NYL5 469 aa13.1□□□□□ -0.31
PRKD3-203ENST00000443187 MAD2L2Q9UI95 211 aa13.1□□□□□ -0.31
PRKD3-203ENST00000443187 SYNGAP1Q96PV0 1343 aa13.1□□□□□ -0.31
PRKD3-203ENST00000443187 LRRC37A2A6NM11 1700 aa13.09□□□□□ -0.31
PRKD3-203ENST00000443187 POTEB2H3BUK9 544 aa13.09□□□□□ -0.31
PRKD3-203ENST00000443187 IFIT3O14879 490 aaKnown RBP13.09□□□□□ -0.31
PRKD3-203ENST00000443187 CDC45O75419 566 aa13.09□□□□□ -0.31
PRKD3-203ENST00000443187 PTGS1P23219 599 aa13.09□□□□□ -0.31
PRKD3-203ENST00000443187 TRDNQ13061 729 aa13.09□□□□□ -0.31
PRKD3-203ENST00000443187 ASPRV1Q53RT3 343 aa13.09□□□□□ -0.31
PRKD3-203ENST00000443187 NSMFQ6X4W1 530 aa13.09□□□□□ -0.31
PRKD3-203ENST00000443187 SLC30A10Q6XR72 485 aa13.09□□□□□ -0.31
PRKD3-203ENST00000443187 KIAA1211Q6ZU35 1233 aa13.09□□□□□ -0.31
PRKD3-203ENST00000443187 ARMCX2Q7L311 632 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms