RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 TINF2Q9BSI4 451 aa21.4■■□□□ 1.02
SMPD4-210ENST00000441135 RBM8AQ9Y5S9 174 aaKnown RBP21.4■■□□□ 1.02
SMPD4-210ENST00000441135 TRDNQ13061 729 aa21.39■■□□□ 1.01
SMPD4-210ENST00000441135 RCSD1Q6JBY9 416 aa21.39■■□□□ 1.01
SMPD4-210ENST00000441135 ARRDC4Q8NCT1 418 aa21.39■■□□□ 1.01
SMPD4-210ENST00000441135 DCAF4Q8WV16 495 aa21.39■■□□□ 1.01
SMPD4-210ENST00000441135 FRMPD3Q5JV73 1810 aa21.39■■□□□ 1.01
SMPD4-210ENST00000441135 DNAJC25-GNG10A0A024R161 153 aa21.38■■□□□ 1.01
SMPD4-210ENST00000441135 B4E1Z4 1266 aa21.38■■□□□ 1.01
SMPD4-210ENST00000441135 SLC4A3P48751 1232 aa21.38■■□□□ 1.01
SMPD4-210ENST00000441135 TMEM47Q9BQJ4 181 aa21.38■■□□□ 1.01
SMPD4-210ENST00000441135 ANO2Q9NQ90 1003 aa21.38■■□□□ 1.01
SMPD4-210ENST00000441135 ZSWIM5Q9P217 1185 aa21.38■■□□□ 1.01
SMPD4-210ENST00000441135 SYNGAP1Q96PV0 1343 aa21.37■■□□□ 1.01
SMPD4-210ENST00000441135 PRAMEF19Q5SWL8 479 aa21.37■■□□□ 1.01
SMPD4-210ENST00000441135 KCTD1Q719H9 257 aa21.37■■□□□ 1.01
SMPD4-210ENST00000441135 ZNF467Q7Z7K2 595 aaPredicted RBP21.37■■□□□ 1.01
SMPD4-210ENST00000441135 ANKRD35Q8N283 1001 aa21.37■■□□□ 1.01
SMPD4-210ENST00000441135 PRO3102Q9H379 93 aa21.37■■□□□ 1.01
SMPD4-210ENST00000441135 CNPY2Q9Y2B0 182 aa21.37■■□□□ 1.01
SMPD4-210ENST00000441135 ALPK3Q96L96 1907 aa21.36■■□□□ 1.01
SMPD4-210ENST00000441135 NECTIN1Q15223 517 aa21.36■■□□□ 1.01
SMPD4-210ENST00000441135 CCDC96Q2M329 555 aa21.36■■□□□ 1.01
SMPD4-210ENST00000441135 TKFCQ3LXA3 575 aa21.36■■□□□ 1.01
SMPD4-210ENST00000441135 NCOA7Q8NI08 942 aa21.36■■□□□ 1.01
SMPD4-210ENST00000441135 ZSCAN10Q96SZ4 725 aaPredicted RBP21.36■■□□□ 1.01
SMPD4-210ENST00000441135 ACAD9Q9H845 621 aa21.36■■□□□ 1.01
SMPD4-210ENST00000441135 RBM27Q9P2N5 1060 aaKnown RBP21.36■■□□□ 1.01
SMPD4-210ENST00000441135 TRIOBPQ9H2D6 2365 aa21.35■■□□□ 1.01
SMPD4-210ENST00000441135 KBTBD13C9JR72 458 aa21.35■■□□□ 1.01
SMPD4-210ENST00000441135 E7EWF7 191 aa21.35■■□□□ 1.01
SMPD4-210ENST00000441135 SNHG28P0DPA3 235 aa21.35■■□□□ 1.01
SMPD4-210ENST00000441135 RARBP10826 455 aa21.35■■□□□ 1.01
SMPD4-210ENST00000441135 FXR1P51114 621 aaKnown RBP eCLIP21.35■■□□□ 1.01
SMPD4-210ENST00000441135 LRRC26Q2I0M4 334 aa21.35■■□□□ 1.01
SMPD4-210ENST00000441135 MAMDC4Q6UXC1 1216 aa21.35■■□□□ 1.01
SMPD4-210ENST00000441135 RALYLQ86SE5 291 aaKnown RBP21.35■■□□□ 1.01
SMPD4-210ENST00000441135 UBAC1Q9BSL1 405 aa21.35■■□□□ 1.01
SMPD4-210ENST00000441135 MTA3Q9BTC8 594 aa21.35■■□□□ 1.01
SMPD4-210ENST00000441135 SENP6Q9GZR1 1112 aaPredicted RBP21.35■■□□□ 1.01
SMPD4-210ENST00000441135 PRR12Q9ULL5 1215 aa21.35■■□□□ 1.01
SMPD4-210ENST00000441135 MTMR7Q9Y216 660 aa21.35■■□□□ 1.01
SMPD4-210ENST00000441135 ZNF536O15090 1300 aa21.34■■□□□ 1.01
SMPD4-210ENST00000441135 TNKSO95271 1327 aa21.34■■□□□ 1.01
SMPD4-210ENST00000441135 A0A1W2PPC1 479 aa21.34■■□□□ 1.01
SMPD4-210ENST00000441135 EPB41L2O43491 1005 aaKnown RBP21.34■■□□□ 1.01
SMPD4-210ENST00000441135 ANO1Q5XXA6 986 aa21.34■■□□□ 1.01
SMPD4-210ENST00000441135 ENAHQ8N8S7 591 aaPredicted RBP21.34■■□□□ 1.01
SMPD4-210ENST00000441135 CHMP4CQ96CF2 233 aa21.34■■□□□ 1.01
SMPD4-210ENST00000441135 HOMER2Q9NSB8 354 aa21.34■■□□□ 1.01
SMPD4-210ENST00000441135 RNF146Q9NTX7 359 aa21.34■■□□□ 1.01
SMPD4-210ENST00000441135 ZMYND8Q9ULU4 1186 aaPredicted RBP21.34■■□□□ 1.01
SMPD4-210ENST00000441135 SLC27A2O14975 620 aa21.33■■□□□ 1.01
SMPD4-210ENST00000441135 ZNF865P0CJ78 1059 aaPredicted RBP21.33■■□□□ 1.01
SMPD4-210ENST00000441135 PDHBP11177 359 aa21.33■■□□□ 1.01
SMPD4-210ENST00000441135 AKR1A1P14550 325 aa21.33■■□□□ 1.01
SMPD4-210ENST00000441135 GJC2Q5T442 439 aaPredicted RBP21.33■■□□□ 1.01
SMPD4-210ENST00000441135 RNF20Q5VTR2 975 aa21.33■■□□□ 1.01
SMPD4-210ENST00000441135 CREB3L3Q68CJ9 461 aa21.33■■□□□ 1.01
SMPD4-210ENST00000441135 BTNL9Q6UXG8 535 aa21.33■■□□□ 1.01
SMPD4-210ENST00000441135 STOX1Q6ZVD7 989 aa21.33■■□□□ 1.01
SMPD4-210ENST00000441135 RASGRP2Q7LDG7 609 aa21.33■■□□□ 1.01
SMPD4-210ENST00000441135 AGBL1Q96MI9 1066 aa21.33■■□□□ 1.01
SMPD4-210ENST00000441135 XPNPEP3Q9NQH7 507 aa21.33■■□□□ 1.01
SMPD4-210ENST00000441135 PLXNA1Q9UIW2 1896 aa21.32■■□□□ 1
SMPD4-210ENST00000441135 ZNFX1Q9P2E3 1918 aaKnown RBP21.32■■□□□ 1
SMPD4-210ENST00000441135 SEC23AQ15436 765 aa21.32■■□□□ 1
SMPD4-210ENST00000441135 GPATCH4Q5T3I0 446 aaKnown RBP21.32■■□□□ 1
SMPD4-210ENST00000441135 MB21D2Q8IYB1 491 aaPredicted RBP21.32■■□□□ 1
SMPD4-210ENST00000441135 PNMA1Q8ND90 353 aa21.32■■□□□ 1
SMPD4-210ENST00000441135 ZKSCAN3Q9BRR0 538 aa21.32■■□□□ 1
SMPD4-210ENST00000441135 KAT14Q9H8E8 782 aa21.32■■□□□ 1
SMPD4-210ENST00000441135 TAF6LQ9Y6J9 622 aa21.32■■□□□ 1
SMPD4-210ENST00000441135 TAL1P17542 331 aaPredicted RBP21.31■■□□□ 1
SMPD4-210ENST00000441135 ZNF543Q08ER8 600 aa21.31■■□□□ 1
SMPD4-210ENST00000441135 SART3Q15020 963 aaKnown RBP21.31■■□□□ 1
SMPD4-210ENST00000441135 LRRC41Q15345 812 aa21.31■■□□□ 1
SMPD4-210ENST00000441135 TSGA10IPQ3SY00 556 aa21.31■■□□□ 1
SMPD4-210ENST00000441135 SYDE2Q5VT97 1194 aa21.31■■□□□ 1
SMPD4-210ENST00000441135 CCDC174Q6PII3 467 aa21.31■■□□□ 1
SMPD4-210ENST00000441135 CYB5R4Q7L1T6 521 aa21.31■■□□□ 1
SMPD4-210ENST00000441135 GDF15Q99988 308 aa21.31■■□□□ 1
SMPD4-210ENST00000441135 RANBP17Q9H2T7 1088 aaKnown RBP21.31■■□□□ 1
SMPD4-210ENST00000441135 A1CFQ9NQ94 594 aaKnown RBP21.31■■□□□ 1
SMPD4-210ENST00000441135 PNMA2Q9UL42 364 aa21.31■■□□□ 1
SMPD4-210ENST00000441135 RANBP2P49792 3224 aaKnown RBP21.31■■□□□ 1
SMPD4-210ENST00000441135 POTEB2H3BUK9 544 aa21.3■■□□□ 1
SMPD4-210ENST00000441135 REC8O95072 547 aa21.3■■□□□ 1
SMPD4-210ENST00000441135 SNAI1O95863 264 aaPredicted RBP21.3■■□□□ 1
SMPD4-210ENST00000441135 MYCNP04198 464 aaPredicted RBP21.3■■□□□ 1
SMPD4-210ENST00000441135 ICAM1P05362 532 aa21.3■■□□□ 1
SMPD4-210ENST00000441135 ALAS1P13196 640 aa21.3■■□□□ 1
SMPD4-210ENST00000441135 BMP8BP34820 402 aa21.3■■□□□ 1
SMPD4-210ENST00000441135 IFIT1BQ5T764 474 aaKnown RBP21.3■■□□□ 1
SMPD4-210ENST00000441135 RNF180Q86T96 592 aa21.3■■□□□ 1
SMPD4-210ENST00000441135 FGD4Q96M96 766 aa21.3■■□□□ 1
SMPD4-210ENST00000441135 TRERF1Q96PN7 1200 aa21.3■■□□□ 1
SMPD4-210ENST00000441135 ABHD16BQ9H3Z7 469 aa21.3■■□□□ 1
SMPD4-210ENST00000441135 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.3■■□□□ 1
SMPD4-210ENST00000441135 ZHX1Q9UKY1 873 aaPredicted RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms