RNA–Protein interactions for RNA: ENST00000440825.6

FAAP20-210, Transcript of FA core complex associated protein 20, humanhuman

TSL 3

Gene FAAP20, Length 855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-210ENST00000440825 RNF146Q9NTX7 359 aa32.58■■■□□ 2.81
FAAP20-210ENST00000440825 NR2E3Q9Y5X4 410 aa32.58■■■□□ 2.81
FAAP20-210ENST00000440825 ZSCAN10Q96SZ4 725 aaPredicted RBP32.57■■■□□ 2.8
FAAP20-210ENST00000440825 KAT14Q9H8E8 782 aa32.57■■■□□ 2.8
FAAP20-210ENST00000440825 ZSWIM5Q9P217 1185 aa32.57■■■□□ 2.8
FAAP20-210ENST00000440825 SGSM2O43147 1006 aa32.56■■■□□ 2.8
FAAP20-210ENST00000440825 SEPT4O43236 478 aa32.56■■■□□ 2.8
FAAP20-210ENST00000440825 TAL1P17542 331 aaPredicted RBP32.56■■■□□ 2.8
FAAP20-210ENST00000440825 CCDC178Q5BJE1 867 aa32.56■■■□□ 2.8
FAAP20-210ENST00000440825 TRERF1Q96PN7 1200 aa32.56■■■□□ 2.8
FAAP20-210ENST00000440825 CCPG1Q9ULG6 757 aa32.56■■■□□ 2.8
FAAP20-210ENST00000440825 DGKHQ86XP1 1220 aa32.55■■■□□ 2.8
FAAP20-210ENST00000440825 UBAC1Q9BSL1 405 aa32.55■■■□□ 2.8
FAAP20-210ENST00000440825 CNPY2Q9Y2B0 182 aa32.55■■■□□ 2.8
FAAP20-210ENST00000440825 TNKSO95271 1327 aa32.54■■■□□ 2.8
FAAP20-210ENST00000440825 DNAJC25-GNG10A0A024R161 153 aa32.54■■■□□ 2.8
FAAP20-210ENST00000440825 NT5C2P49902 561 aa32.54■■■□□ 2.8
FAAP20-210ENST00000440825 ZNF543Q08ER8 600 aa32.54■■■□□ 2.8
FAAP20-210ENST00000440825 C7orf61Q8IZ16 206 aa32.54■■■□□ 2.8
FAAP20-210ENST00000440825 PNMA1Q8ND90 353 aa32.54■■■□□ 2.8
FAAP20-210ENST00000440825 U3KPZ7 1027 aaPredicted RBP32.54■■■□□ 2.8
FAAP20-210ENST00000440825 PFASO15067 1338 aa32.53■■■□□ 2.8
FAAP20-210ENST00000440825 GOLGA8HP0CJ92 632 aa32.53■■■□□ 2.8
FAAP20-210ENST00000440825 TRDNQ13061 729 aa32.53■■■□□ 2.8
FAAP20-210ENST00000440825 TKFCQ3LXA3 575 aa32.53■■■□□ 2.8
FAAP20-210ENST00000440825 GJC2Q5T442 439 aaPredicted RBP32.53■■■□□ 2.8
FAAP20-210ENST00000440825 BTNL9Q6UXG8 535 aa32.53■■■□□ 2.8
FAAP20-210ENST00000440825 RANBP17Q9H2T7 1088 aaKnown RBP32.53■■■□□ 2.8
FAAP20-210ENST00000440825 ENAHQ8N8S7 591 aaPredicted RBP32.52■■■□□ 2.8
FAAP20-210ENST00000440825 POTEB2H3BUK9 544 aa32.51■■■□□ 2.79
FAAP20-210ENST00000440825 ICAM1P05362 532 aa32.51■■■□□ 2.79
FAAP20-210ENST00000440825 CYP21A2P08686 494 aa32.51■■■□□ 2.79
FAAP20-210ENST00000440825 CNTN2Q02246 1040 aa32.51■■■□□ 2.79
FAAP20-210ENST00000440825 MUM1L1Q5H9M0 696 aa32.51■■■□□ 2.79
FAAP20-210ENST00000440825 DHX30Q7L2E3 1194 aaKnown RBP eCLIP32.51■■■□□ 2.792e-8■■■□□ 15.2
FAAP20-210ENST00000440825 SENP6Q9GZR1 1112 aaPredicted RBP32.51■■■□□ 2.79
FAAP20-210ENST00000440825 A1CFQ9NQ94 594 aaKnown RBP32.51■■■□□ 2.79
FAAP20-210ENST00000440825 ZHX1Q9UKY1 873 aaPredicted RBP32.51■■■□□ 2.79
FAAP20-210ENST00000440825 ALPK3Q96L96 1907 aa32.51■■■□□ 2.79
FAAP20-210ENST00000440825 KIAA1211Q6ZU35 1233 aa32.5■■■□□ 2.79
FAAP20-210ENST00000440825 CCDC136Q96JN2 1154 aa32.5■■■□□ 2.79
FAAP20-210ENST00000440825 NRBP1Q9UHY1 535 aa32.5■■■□□ 2.79
FAAP20-210ENST00000440825 CEP290O15078 2479 aa32.5■■■□□ 2.79
FAAP20-210ENST00000440825 SNHG28P0DPA3 235 aa32.49■■■□□ 2.79
FAAP20-210ENST00000440825 COL6A1P12109 1028 aa32.49■■■□□ 2.79
FAAP20-210ENST00000440825 IFIT1BQ5T764 474 aaKnown RBP32.49■■■□□ 2.79
FAAP20-210ENST00000440825 NSMFQ6X4W1 530 aa32.49■■■□□ 2.79
FAAP20-210ENST00000440825 CYB5R4Q7L1T6 521 aa32.49■■■□□ 2.79
FAAP20-210ENST00000440825 ARRDC4Q8NCT1 418 aa32.49■■■□□ 2.79
FAAP20-210ENST00000440825 UBA5Q9GZZ9 404 aa32.49■■■□□ 2.79
FAAP20-210ENST00000440825 CPVLQ9H3G5 476 aa32.49■■■□□ 2.79
FAAP20-210ENST00000440825 SYNGAP1Q96PV0 1343 aa32.49■■■□□ 2.79
FAAP20-210ENST00000440825 KBTBD13C9JR72 458 aa32.48■■■□□ 2.79
FAAP20-210ENST00000440825 DNM1LO00429 736 aa32.48■■■□□ 2.79
FAAP20-210ENST00000440825 RARBP10826 455 aa32.48■■■□□ 2.79
FAAP20-210ENST00000440825 GPATCH4Q5T3I0 446 aaKnown RBP32.48■■■□□ 2.79
FAAP20-210ENST00000440825 CHRDL2Q6WN34 429 aa32.48■■■□□ 2.79
FAAP20-210ENST00000440825 MSL3Q8N5Y2 521 aaKnown RBP32.48■■■□□ 2.79
FAAP20-210ENST00000440825 COLQQ9Y215 455 aaPredicted RBP32.48■■■□□ 2.79
FAAP20-210ENST00000440825 SNAI1O95863 264 aaPredicted RBP32.47■■■□□ 2.79
FAAP20-210ENST00000440825 ZNF865P0CJ78 1059 aaPredicted RBP32.47■■■□□ 2.79
FAAP20-210ENST00000440825 MAMDC4Q6UXC1 1216 aa32.47■■■□□ 2.79
FAAP20-210ENST00000440825 ZNF467Q7Z7K2 595 aaPredicted RBP32.47■■■□□ 2.79
FAAP20-210ENST00000440825 RALYLQ86SE5 291 aaKnown RBP32.47■■■□□ 2.79
FAAP20-210ENST00000440825 ANKS1AQ92625 1134 aa32.47■■■□□ 2.79
FAAP20-210ENST00000440825 LENG1Q96BZ8 264 aaPredicted RBP32.47■■■□□ 2.79
FAAP20-210ENST00000440825 FGD4Q96M96 766 aa32.47■■■□□ 2.79
FAAP20-210ENST00000440825 XPNPEP3Q9NQH7 507 aa32.47■■■□□ 2.79
FAAP20-210ENST00000440825 CDKN2AIPQ9NXV6 580 aaPredicted RBP32.47■■■□□ 2.79
FAAP20-210ENST00000440825 RBM8AQ9Y5S9 174 aaKnown RBP32.47■■■□□ 2.79
FAAP20-210ENST00000440825 TAF6LQ9Y6J9 622 aa32.47■■■□□ 2.79
FAAP20-210ENST00000440825 AKR1A1P14550 325 aa32.46■■■□□ 2.79
FAAP20-210ENST00000440825 ATN1P54259 1190 aaPredicted RBP32.46■■■□□ 2.79
FAAP20-210ENST00000440825 ARMCX2Q7L311 632 aa32.46■■■□□ 2.79
FAAP20-210ENST00000440825 ZMYND8Q9ULU4 1186 aaPredicted RBP32.46■■■□□ 2.79
FAAP20-210ENST00000440825 E7EWF7 191 aa32.45■■■□□ 2.79
FAAP20-210ENST00000440825 LRRC26Q2I0M4 334 aa32.45■■■□□ 2.79
FAAP20-210ENST00000440825 CCDC144CPQ8IYA2 1237 aa32.45■■■□□ 2.79
FAAP20-210ENST00000440825 MAP4K1Q92918 833 aa32.45■■■□□ 2.79
FAAP20-210ENST00000440825 SMCHD1A6NHR9 2005 aa32.44■■■□□ 2.78
FAAP20-210ENST00000440825 DHX16O60231 1041 aaKnown RBP32.44■■■□□ 2.78
FAAP20-210ENST00000440825 PGK1P00558 417 aa32.44■■■□□ 2.78
FAAP20-210ENST00000440825 NEFLP07196 543 aa32.44■■■□□ 2.78
FAAP20-210ENST00000440825 FAM133AQ8N9E0 248 aa32.44■■■□□ 2.78
FAAP20-210ENST00000440825 ESYT1Q9BSJ8 1104 aa32.44■■■□□ 2.78
FAAP20-210ENST00000440825 CYP39A1Q9NYL5 469 aa32.44■■■□□ 2.78
FAAP20-210ENST00000440825 FAM184BQ9ULE4 1060 aa32.44■■■□□ 2.78
FAAP20-210ENST00000440825 SOWAHBA6NEL2 793 aa32.43■■■□□ 2.78
FAAP20-210ENST00000440825 PARP1P09874 1014 aaKnown RBP32.43■■■□□ 2.78
FAAP20-210ENST00000440825 SYN1P17600 705 aa32.43■■■□□ 2.78
FAAP20-210ENST00000440825 ACVR2BQ13705 512 aa32.43■■■□□ 2.78
FAAP20-210ENST00000440825 LRRC41Q15345 812 aa32.43■■■□□ 2.78
FAAP20-210ENST00000440825 USH1GQ495M9 461 aa32.43■■■□□ 2.78
FAAP20-210ENST00000440825 BMP2KLQ5H9B9 411 aa32.43■■■□□ 2.78
FAAP20-210ENST00000440825 HABP4Q5JVS0 413 aaKnown RBP32.43■■■□□ 2.78
FAAP20-210ENST00000440825 CHST3Q7LGC8 479 aa32.43■■■□□ 2.78
FAAP20-210ENST00000440825 NCOA7Q8NI08 942 aa32.43■■■□□ 2.78
FAAP20-210ENST00000440825 MCM3APO60318 1980 aa32.42■■■□□ 2.78
FAAP20-210ENST00000440825 PTPDC1A2A3K4 754 aa32.42■■■□□ 2.78
FAAP20-210ENST00000440825 NFIBO00712 420 aa32.42■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms