RNA–Protein interactions for RNA: ENST00000438191.1

RPE-209, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5

Gene RPE, Length 426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-209ENST00000438191 PTPN21Q16825 1174 aa11.38□□□□□ -0.59
RPE-209ENST00000438191 METTL16Q86W50 562 aaKnown RBP11.38□□□□□ -0.59
RPE-209ENST00000438191 DZIP1Q86YF9 867 aaKnown RBP11.38□□□□□ -0.59
RPE-209ENST00000438191 MMP19Q99542 508 aa11.38□□□□□ -0.59
RPE-209ENST00000438191 SEMA4AQ9H3S1 761 aa11.38□□□□□ -0.59
RPE-209ENST00000438191 HOXC10Q9NYD6 342 aa11.38□□□□□ -0.59
RPE-209ENST00000438191 CD207Q9UJ71 328 aa11.38□□□□□ -0.59
RPE-209ENST00000438191 ZHX1Q9UKY1 873 aaPredicted RBP11.38□□□□□ -0.59
RPE-209ENST00000438191 ZIC2O95409 532 aaPredicted RBP11.37□□□□□ -0.59
RPE-209ENST00000438191 ICAM3P32942 547 aa11.37□□□□□ -0.59
RPE-209ENST00000438191 COL9A3Q14050 684 aaPredicted RBP11.37□□□□□ -0.59
RPE-209ENST00000438191 PLS1Q14651 629 aa11.37□□□□□ -0.59
RPE-209ENST00000438191 PUM3Q15397 648 aaKnown RBP11.37□□□□□ -0.59
RPE-209ENST00000438191 MSL3Q8N5Y2 521 aaKnown RBP11.37□□□□□ -0.59
RPE-209ENST00000438191 SIL1Q9H173 461 aa11.37□□□□□ -0.59
RPE-209ENST00000438191 RALGAPA2Q2PPJ7 1873 aa11.37□□□□□ -0.59
RPE-209ENST00000438191 MYO7AQ13402 2215 aa11.37□□□□□ -0.59
RPE-209ENST00000438191 OTOGLQ3ZCN5 2332 aa11.36□□□□□ -0.59
RPE-209ENST00000438191 ASH1LQ9NR48 2969 aaKnown RBP11.36□□□□□ -0.59
RPE-209ENST00000438191 ZFYVE26Q68DK2 2539 aa11.36□□□□□ -0.59
RPE-209ENST00000438191 EYA4O95677 639 aa11.36□□□□□ -0.59
RPE-209ENST00000438191 MAP4K4O95819 1239 aaPredicted RBP11.36□□□□□ -0.59
RPE-209ENST00000438191 GH2P01242 217 aa11.36□□□□□ -0.59
RPE-209ENST00000438191 IQCF3P0C7M6 154 aa11.36□□□□□ -0.59
RPE-209ENST00000438191 MB21D1Q8N884 522 aa11.36□□□□□ -0.59
RPE-209ENST00000438191 ACER1Q8TDN7 264 aa11.36□□□□□ -0.59
RPE-209ENST00000438191 ALDH8A1Q9H2A2 487 aaPredicted RBP11.36□□□□□ -0.59
RPE-209ENST00000438191 H3BNC9 293 aa11.35□□□□□ -0.59
RPE-209ENST00000438191 PSMC6P62333 389 aa11.35□□□□□ -0.59
RPE-209ENST00000438191 HYAL1Q12794 435 aa11.35□□□□□ -0.59
RPE-209ENST00000438191 GPM6BQ13491 265 aa11.35□□□□□ -0.59
RPE-209ENST00000438191 ACVR2BQ13705 512 aa11.35□□□□□ -0.59
RPE-209ENST00000438191 CCDC144BQ3MJ40 725 aa11.35□□□□□ -0.59
RPE-209ENST00000438191 EPC2Q52LR7 807 aa11.35□□□□□ -0.59
RPE-209ENST00000438191 MAMDC4Q6UXC1 1216 aa11.35□□□□□ -0.59
RPE-209ENST00000438191 FOXP4Q8IVH2 680 aaPredicted RBP11.35□□□□□ -0.59
RPE-209ENST00000438191 DCLK2Q8N568 766 aa11.35□□□□□ -0.59
RPE-209ENST00000438191 ZGPATQ8N5A5 531 aaKnown RBP11.35□□□□□ -0.59
RPE-209ENST00000438191 TSPYL6Q8N831 410 aa11.35□□□□□ -0.59
RPE-209ENST00000438191 ZNF384Q8TF68 577 aa11.35□□□□□ -0.59
RPE-209ENST00000438191 STK31Q9BXU1 1019 aa11.35□□□□□ -0.59
RPE-209ENST00000438191 DHX36Q9H2U1 1008 aaKnown RBP11.35□□□□□ -0.59
RPE-209ENST00000438191 DENND2AQ9ULE3 1009 aa11.35□□□□□ -0.59
RPE-209ENST00000438191 ASTN1O14525 1302 aa11.35□□□□□ -0.59
RPE-209ENST00000438191 GCN1Q92616 2671 aaKnown RBP11.34□□□□□ -0.59
RPE-209ENST00000438191 MCM3APO60318 1980 aa11.34□□□□□ -0.59
RPE-209ENST00000438191 ASPMQ8IZT6 3477 aa11.34□□□□□ -0.59
RPE-209ENST00000438191 SLC25A27O95847 323 aa11.34□□□□□ -0.59
RPE-209ENST00000438191 SUPT20HL2P0C7V6 817 aa11.34□□□□□ -0.59
RPE-209ENST00000438191 SDHBP21912 280 aa11.34□□□□□ -0.59
RPE-209ENST00000438191 DMWDQ09019 674 aa11.34□□□□□ -0.59
RPE-209ENST00000438191 ASTLQ6HA08 431 aaPredicted RBP11.34□□□□□ -0.59
RPE-209ENST00000438191 CRACR2BQ8N4Y2 399 aaPredicted RBP11.34□□□□□ -0.59
RPE-209ENST00000438191 LPIN2Q92539 896 aa11.34□□□□□ -0.59
RPE-209ENST00000438191 RUBCNQ92622 972 aa11.34□□□□□ -0.59
RPE-209ENST00000438191 MSLNLQ96KJ4 702 aa11.34□□□□□ -0.59
RPE-209ENST00000438191 CRBNQ96SW2 442 aa11.34□□□□□ -0.59
RPE-209ENST00000438191 HAUS7Q99871 368 aa11.34□□□□□ -0.59
RPE-209ENST00000438191 HINFPQ9BQA5 517 aa11.34□□□□□ -0.59
RPE-209ENST00000438191 TRMT13Q9NUP7 481 aaKnown RBP11.34□□□□□ -0.59
RPE-209ENST00000438191 PARP14Q460N5 1801 aa11.34□□□□□ -0.59
RPE-209ENST00000438191 NLRC5Q86WI3 1866 aa11.34□□□□□ -0.59
RPE-209ENST00000438191 FRYLO94915 3013 aa11.33□□□□□ -0.6
RPE-209ENST00000438191 GRM8O00222 908 aa11.33□□□□□ -0.6
RPE-209ENST00000438191 SEMA3EO15041 775 aa11.33□□□□□ -0.6
RPE-209ENST00000438191 LINC01565O15544 149 aa11.33□□□□□ -0.6
RPE-209ENST00000438191 FLIIQ13045 1269 aa11.33□□□□□ -0.6
RPE-209ENST00000438191 CYP2W1Q8TAV3 490 aa11.33□□□□□ -0.6
RPE-209ENST00000438191 KAZALD1Q96I82 304 aa11.33□□□□□ -0.6
RPE-209ENST00000438191 SAMD11Q96NU1 681 aa11.33□□□□□ -0.6
RPE-209ENST00000438191 ABCF2Q9UG63 623 aa11.33□□□□□ -0.6
RPE-209ENST00000438191 DCDC2BA2VCK2 349 aa11.32□□□□□ -0.6
RPE-209ENST00000438191 PITPNM1O00562 1244 aa11.32□□□□□ -0.6
RPE-209ENST00000438191 RRP1P56182 461 aaKnown RBP11.32□□□□□ -0.6
RPE-209ENST00000438191 MECOMQ03112 1051 aa11.32□□□□□ -0.6
RPE-209ENST00000438191 FKBP5Q13451 457 aaPredicted RBP11.32□□□□□ -0.6
RPE-209ENST00000438191 TMEM132BQ14DG7 1078 aa11.32□□□□□ -0.6
RPE-209ENST00000438191 ANGPT1Q15389 498 aa11.32□□□□□ -0.6
RPE-209ENST00000438191 BEND3Q5T5X7 828 aa11.32□□□□□ -0.6
RPE-209ENST00000438191 TEX11Q8IYF3 940 aa11.32□□□□□ -0.6
RPE-209ENST00000438191 CRIPAKQ8N1N5 446 aa11.32□□□□□ -0.6
RPE-209ENST00000438191 RETREG2Q8NC44 543 aa11.32□□□□□ -0.6
RPE-209ENST00000438191 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.32□□□□□ -0.6
RPE-209ENST00000438191 ATG4CQ96DT6 458 aa11.32□□□□□ -0.6
RPE-209ENST00000438191 RPGRIP1Q96KN7 1286 aa11.32□□□□□ -0.6
RPE-209ENST00000438191 PHF7Q9BWX1 381 aaPredicted RBP11.32□□□□□ -0.6
RPE-209ENST00000438191 GNL3LQ9NVN8 582 aaKnown RBP11.32□□□□□ -0.6
RPE-209ENST00000438191 IFT57Q9NWB7 429 aa11.32□□□□□ -0.6
RPE-209ENST00000438191 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.32□□□□□ -0.6
RPE-209ENST00000438191 ZBTB22O15209 634 aa11.31□□□□□ -0.6
RPE-209ENST00000438191 GTF2F1P35269 517 aaKnown RBP eCLIP11.31□□□□□ -0.6
RPE-209ENST00000438191 CLCN5P51795 746 aa11.31□□□□□ -0.6
RPE-209ENST00000438191 GNAI1P63096 354 aa11.31□□□□□ -0.6
RPE-209ENST00000438191 ADAM15Q13444 863 aa11.31□□□□□ -0.6
RPE-209ENST00000438191 FAM117BQ6P1L5 589 aa11.31□□□□□ -0.6
RPE-209ENST00000438191 RIOX2Q8IUF8 465 aa11.31□□□□□ -0.6
RPE-209ENST00000438191 CCDC146Q8IYE0 955 aa11.31□□□□□ -0.6
RPE-209ENST00000438191 SMRP1Q8NCR6 262 aa11.31□□□□□ -0.6
RPE-209ENST00000438191 SP7Q8TDD2 431 aaPredicted RBP11.31□□□□□ -0.6
RPE-209ENST00000438191 SUCLG2Q96I99 432 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms