RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 FAM47AQ5JRC9 791 aa12.82□□□□□ -0.36
HMGCL-204ENST00000436439 Q7L0L9 218 aa12.82□□□□□ -0.36
HMGCL-204ENST00000436439 RIOX2Q8IUF8 465 aa12.82□□□□□ -0.36
HMGCL-204ENST00000436439 FBXL16Q8N461 479 aa12.82□□□□□ -0.36
HMGCL-204ENST00000436439 STAG1Q8WVM7 1258 aa12.82□□□□□ -0.36
HMGCL-204ENST00000436439 MMP19Q99542 508 aa12.82□□□□□ -0.36
HMGCL-204ENST00000436439 UPF3BQ9BZI7 483 aaKnown RBP12.82□□□□□ -0.36
HMGCL-204ENST00000436439 IGKV6D-41A0A0C4DH26 115 aa12.81□□□□□ -0.36
HMGCL-204ENST00000436439 K7ELQ4 463 aaPredicted RBP12.81□□□□□ -0.36
HMGCL-204ENST00000436439 PRDM1O75626 825 aa12.81□□□□□ -0.36
HMGCL-204ENST00000436439 FGRP09769 529 aa12.81□□□□□ -0.36
HMGCL-204ENST00000436439 STAT3P40763 770 aa12.81□□□□□ -0.36
HMGCL-204ENST00000436439 HAND2P61296 217 aa12.81□□□□□ -0.36
HMGCL-204ENST00000436439 AKNAD1Q5T1N1 836 aa12.81□□□□□ -0.36
HMGCL-204ENST00000436439 DHX32Q7L7V1 743 aaKnown RBP12.81□□□□□ -0.36
HMGCL-204ENST00000436439 NCOA7Q8NI08 942 aa12.81□□□□□ -0.36
HMGCL-204ENST00000436439 RNF41Q9H4P4 317 aaPredicted RBP12.81□□□□□ -0.36
HMGCL-204ENST00000436439 CNNM2Q9H8M5 875 aa12.81□□□□□ -0.36
HMGCL-204ENST00000436439 MKNK2Q9HBH9 465 aa12.81□□□□□ -0.36
HMGCL-204ENST00000436439 SLC5A4Q9NY91 659 aa12.81□□□□□ -0.36
HMGCL-204ENST00000436439 NYAP2Q9P242 653 aa12.81□□□□□ -0.36
HMGCL-204ENST00000436439 F5H6K3 240 aa12.81□□□□□ -0.36
HMGCL-204ENST00000436439 NDUFB10O96000 172 aa12.81□□□□□ -0.36
HMGCL-204ENST00000436439 MYCNP04198 464 aaPredicted RBP12.81□□□□□ -0.36
HMGCL-204ENST00000436439 TAL1P17542 331 aaPredicted RBP12.81□□□□□ -0.36
HMGCL-204ENST00000436439 EXOSC10Q01780 885 aaKnown RBP12.81□□□□□ -0.36
HMGCL-204ENST00000436439 KLRC3Q07444 240 aa12.81□□□□□ -0.36
HMGCL-204ENST00000436439 ANKRD1Q15327 319 aa12.81□□□□□ -0.36
HMGCL-204ENST00000436439 LRRC41Q15345 812 aa12.81□□□□□ -0.36
HMGCL-204ENST00000436439 ZNF792Q3KQV3 632 aa12.81□□□□□ -0.36
HMGCL-204ENST00000436439 SLC39A5Q6ZMH5 540 aa12.81□□□□□ -0.36
HMGCL-204ENST00000436439 TBC1D10CQ8IV04 446 aa12.81□□□□□ -0.36
HMGCL-204ENST00000436439 AGXT2Q9BYV1 514 aa12.81□□□□□ -0.36
HMGCL-204ENST00000436439 PDRG1Q9NUG6 133 aa12.81□□□□□ -0.36
HMGCL-204ENST00000436439 CLIP2Q9UDT6 1046 aa12.81□□□□□ -0.36
HMGCL-204ENST00000436439 ATP11BQ9Y2G3 1177 aa12.81□□□□□ -0.36
HMGCL-204ENST00000436439 RIPK3Q9Y572 518 aa12.81□□□□□ -0.36
HMGCL-204ENST00000436439 KBTBD13C9JR72 458 aa12.8□□□□□ -0.36
HMGCL-204ENST00000436439 TRDNQ13061 729 aa12.8□□□□□ -0.36
HMGCL-204ENST00000436439 MFSD6Q6ZSS7 791 aa12.8□□□□□ -0.36
HMGCL-204ENST00000436439 MB21D2Q8IYB1 491 aaPredicted RBP12.8□□□□□ -0.36
HMGCL-204ENST00000436439 DEFB123Q8N688 67 aa12.8□□□□□ -0.36
HMGCL-204ENST00000436439 ARRDC4Q8NCT1 418 aa12.8□□□□□ -0.36
HMGCL-204ENST00000436439 FERMT2Q96AC1 680 aa12.8□□□□□ -0.36
HMGCL-204ENST00000436439 CEP95Q96GE4 821 aa12.8□□□□□ -0.36
HMGCL-204ENST00000436439 SLF1Q9BQI6 1058 aa12.8□□□□□ -0.36
HMGCL-204ENST00000436439 TINF2Q9BSI4 451 aa12.8□□□□□ -0.36
HMGCL-204ENST00000436439 MTA3Q9BTC8 594 aa12.8□□□□□ -0.36
HMGCL-204ENST00000436439 KRT23Q9C075 422 aa12.8□□□□□ -0.36
HMGCL-204ENST00000436439 ZNF865P0CJ78 1059 aaPredicted RBP12.79□□□□□ -0.36
HMGCL-204ENST00000436439 MCM5P33992 734 aa12.79□□□□□ -0.36
HMGCL-204ENST00000436439 ADCYAP1R1P41586 468 aa12.79□□□□□ -0.36
HMGCL-204ENST00000436439 AK2P54819 239 aa12.79□□□□□ -0.36
HMGCL-204ENST00000436439 KCTD2Q14681 263 aa12.79□□□□□ -0.36
HMGCL-204ENST00000436439 SNX17Q15036 470 aa12.79□□□□□ -0.36
HMGCL-204ENST00000436439 TRIM60Q495X7 471 aa12.79□□□□□ -0.36
HMGCL-204ENST00000436439 SNRNP48Q6IEG0 339 aaKnown RBP12.79□□□□□ -0.36
HMGCL-204ENST00000436439 GPR153Q6NV75 609 aa12.79□□□□□ -0.36
HMGCL-204ENST00000436439 RALYLQ86SE5 291 aaKnown RBP12.79□□□□□ -0.36
HMGCL-204ENST00000436439 LENG1Q96BZ8 264 aaPredicted RBP12.79□□□□□ -0.36
HMGCL-204ENST00000436439 DIS3Q9Y2L1 958 aaKnown RBP12.79□□□□□ -0.36
HMGCL-204ENST00000436439 ORC4O43929 436 aa12.78□□□□□ -0.36
HMGCL-204ENST00000436439 PGK1P00558 417 aa12.78□□□□□ -0.36
HMGCL-204ENST00000436439 SLC3A2P08195 630 aaKnown RBP12.78□□□□□ -0.36
HMGCL-204ENST00000436439 CPA1P15085 419 aa12.78□□□□□ -0.36
HMGCL-204ENST00000436439 CTDSPL2Q05D32 466 aa12.78□□□□□ -0.36
HMGCL-204ENST00000436439 COL9A3Q14050 684 aaPredicted RBP12.78□□□□□ -0.36
HMGCL-204ENST00000436439 SH3RF1Q7Z6J0 888 aa12.78□□□□□ -0.36
HMGCL-204ENST00000436439 ZNF444Q8N0Y2 327 aaPredicted RBP12.78□□□□□ -0.36
HMGCL-204ENST00000436439 CPXCR1Q8N123 301 aa12.78□□□□□ -0.36
HMGCL-204ENST00000436439 LRRC47Q8N1G4 583 aaKnown RBP12.78□□□□□ -0.36
HMGCL-204ENST00000436439 PRPF38AQ8NAV1 312 aaKnown RBP12.78□□□□□ -0.36
HMGCL-204ENST00000436439 MKL1Q969V6 931 aa12.78□□□□□ -0.36
HMGCL-204ENST00000436439 TEX13BQ9BXU2 312 aa12.78□□□□□ -0.36
HMGCL-204ENST00000436439 XPNPEP3Q9NQH7 507 aa12.78□□□□□ -0.36
HMGCL-204ENST00000436439 MTMR4Q9NYA4 1195 aa12.78□□□□□ -0.36
HMGCL-204ENST00000436439 LIMCH1Q9UPQ0 1083 aa12.78□□□□□ -0.36
HMGCL-204ENST00000436439 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.78□□□□□ -0.36
HMGCL-204ENST00000436439 TACC3Q9Y6A5 838 aa12.78□□□□□ -0.36
HMGCL-204ENST00000436439 NEDD4P46934 1319 aa12.78□□□□□ -0.36
HMGCL-204ENST00000436439 PLIN4Q96Q06 1357 aa12.78□□□□□ -0.36
HMGCL-204ENST00000436439 LAMA2P24043 3122 aaKnown RBP12.77□□□□□ -0.36
HMGCL-204ENST00000436439 DNAJC25-GNG10A0A024R161 153 aa12.77□□□□□ -0.37
HMGCL-204ENST00000436439 LCTP09848 1927 aa12.77□□□□□ -0.37
HMGCL-204ENST00000436439 COPB2P35606 906 aa12.77□□□□□ -0.37
HMGCL-204ENST00000436439 EVCP57679 992 aa12.77□□□□□ -0.37
HMGCL-204ENST00000436439 PDE4BQ07343 736 aa12.77□□□□□ -0.37
HMGCL-204ENST00000436439 CUL4AQ13619 759 aa12.77□□□□□ -0.37
HMGCL-204ENST00000436439 TOB2Q14106 344 aaPredicted RBP12.77□□□□□ -0.37
HMGCL-204ENST00000436439 NFKBIBQ15653 356 aa12.77□□□□□ -0.37
HMGCL-204ENST00000436439 KIFC2Q96AC6 838 aa12.77□□□□□ -0.37
HMGCL-204ENST00000436439 ZSCAN31Q96LW9 406 aaPredicted RBP12.77□□□□□ -0.37
HMGCL-204ENST00000436439 LBHD1Q9BQE6 289 aaPredicted RBP12.77□□□□□ -0.37
HMGCL-204ENST00000436439 RAVER2Q9HCJ3 691 aaKnown RBP12.77□□□□□ -0.37
HMGCL-204ENST00000436439 PRDM5Q9NQX1 630 aaPredicted RBP12.77□□□□□ -0.37
HMGCL-204ENST00000436439 PDLIM7Q9NR12 457 aa12.77□□□□□ -0.37
HMGCL-204ENST00000436439 SH2B1Q9NRF2 756 aaPredicted RBP12.77□□□□□ -0.37
HMGCL-204ENST00000436439 MTMR10Q9NXD2 777 aa12.77□□□□□ -0.37
HMGCL-204ENST00000436439 NRBP1Q9UHY1 535 aa12.77□□□□□ -0.37
HMGCL-204ENST00000436439 LRRC37A2A6NM11 1700 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms