RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 ZNFX1Q9P2E3 1918 aaKnown RBP21.51■■□□□ 1.03
HMGN1-207ENST00000436324 DNAJC25-GNG10A0A024R161 153 aa21.51■■□□□ 1.03
HMGN1-207ENST00000436324 SEPT4O43236 478 aa21.51■■□□□ 1.03
HMGN1-207ENST00000436324 C7orf61Q8IZ16 206 aa21.51■■□□□ 1.03
HMGN1-207ENST00000436324 ZSCAN10Q96SZ4 725 aaPredicted RBP21.51■■□□□ 1.03
HMGN1-207ENST00000436324 KRT23Q9C075 422 aa21.51■■□□□ 1.03
HMGN1-207ENST00000436324 ACAD9Q9H845 621 aa21.51■■□□□ 1.03
HMGN1-207ENST00000436324 CCPG1Q9ULG6 757 aa21.51■■□□□ 1.03
HMGN1-207ENST00000436324 SGSM2O43147 1006 aa21.5■■□□□ 1.03
HMGN1-207ENST00000436324 ZNF543Q08ER8 600 aa21.5■■□□□ 1.03
HMGN1-207ENST00000436324 CCDC178Q5BJE1 867 aa21.5■■□□□ 1.03
HMGN1-207ENST00000436324 GJC2Q5T442 439 aaPredicted RBP21.5■■□□□ 1.03
HMGN1-207ENST00000436324 BTNL9Q6UXG8 535 aa21.5■■□□□ 1.03
HMGN1-207ENST00000436324 CENPQQ7L2Z9 268 aaPredicted RBP21.5■■□□□ 1.03
HMGN1-207ENST00000436324 DGKHQ86XP1 1220 aa21.5■■□□□ 1.03
HMGN1-207ENST00000436324 GOLGA8HP0CJ92 632 aa21.49■■□□□ 1.03
HMGN1-207ENST00000436324 COL6A1P12109 1028 aa21.49■■□□□ 1.03
HMGN1-207ENST00000436324 CNTN2Q02246 1040 aa21.49■■□□□ 1.03
HMGN1-207ENST00000436324 TKFCQ3LXA3 575 aa21.49■■□□□ 1.03
HMGN1-207ENST00000436324 MUM1L1Q5H9M0 696 aa21.49■■□□□ 1.03
HMGN1-207ENST00000436324 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.49■■□□□ 1.03
HMGN1-207ENST00000436324 SENP6Q9GZR1 1112 aaPredicted RBP21.49■■□□□ 1.03
HMGN1-207ENST00000436324 RANBP17Q9H2T7 1088 aaKnown RBP21.49■■□□□ 1.03
HMGN1-207ENST00000436324 KAT14Q9H8E8 782 aa21.49■■□□□ 1.03
HMGN1-207ENST00000436324 CNNM2Q9H8M5 875 aa21.49■■□□□ 1.03
HMGN1-207ENST00000436324 COLQQ9Y215 455 aaPredicted RBP21.49■■□□□ 1.03
HMGN1-207ENST00000436324 CNPY2Q9Y2B0 182 aa21.49■■□□□ 1.03
HMGN1-207ENST00000436324 POTEB2H3BUK9 544 aa21.48■■□□□ 1.03
HMGN1-207ENST00000436324 SNAI1O95863 264 aaPredicted RBP21.48■■□□□ 1.03
HMGN1-207ENST00000436324 CHRDL2Q6WN34 429 aa21.48■■□□□ 1.03
HMGN1-207ENST00000436324 ENAHQ8N8S7 591 aaPredicted RBP21.48■■□□□ 1.03
HMGN1-207ENST00000436324 ARRDC4Q8NCT1 418 aa21.48■■□□□ 1.03
HMGN1-207ENST00000436324 PNMA1Q8ND90 353 aa21.48■■□□□ 1.03
HMGN1-207ENST00000436324 UBAC1Q9BSL1 405 aa21.48■■□□□ 1.03
HMGN1-207ENST00000436324 A1CFQ9NQ94 594 aaKnown RBP21.48■■□□□ 1.03
HMGN1-207ENST00000436324 NRBP1Q9UHY1 535 aa21.48■■□□□ 1.03
HMGN1-207ENST00000436324 U3KPZ7 1027 aaPredicted RBP21.48■■□□□ 1.03
HMGN1-207ENST00000436324 TNKSO95271 1327 aa21.48■■□□□ 1.03
HMGN1-207ENST00000436324 LAMA4Q16363 1823 aa21.48■■□□□ 1.03
HMGN1-207ENST00000436324 ICAM1P05362 532 aa21.47■■□□□ 1.03
HMGN1-207ENST00000436324 ZNF865P0CJ78 1059 aaPredicted RBP21.47■■□□□ 1.03
HMGN1-207ENST00000436324 SNHG28P0DPA3 235 aa21.47■■□□□ 1.03
HMGN1-207ENST00000436324 NT5C2P49902 561 aa21.47■■□□□ 1.03
HMGN1-207ENST00000436324 HABP4Q5JVS0 413 aaKnown RBP21.47■■□□□ 1.03
HMGN1-207ENST00000436324 CYB5R4Q7L1T6 521 aa21.47■■□□□ 1.03
HMGN1-207ENST00000436324 LENG1Q96BZ8 264 aaPredicted RBP21.47■■□□□ 1.03
HMGN1-207ENST00000436324 FGD4Q96M96 766 aa21.47■■□□□ 1.03
HMGN1-207ENST00000436324 UBA5Q9GZZ9 404 aa21.47■■□□□ 1.03
HMGN1-207ENST00000436324 CPVLQ9H3G5 476 aa21.47■■□□□ 1.03
HMGN1-207ENST00000436324 ZHX1Q9UKY1 873 aaPredicted RBP21.47■■□□□ 1.03
HMGN1-207ENST00000436324 ZMYND8Q9ULU4 1186 aaPredicted RBP21.47■■□□□ 1.03
HMGN1-207ENST00000436324 DNM1LO00429 736 aa21.46■■□□□ 1.03
HMGN1-207ENST00000436324 CYP21A2P08686 494 aa21.46■■□□□ 1.03
HMGN1-207ENST00000436324 RARBP10826 455 aa21.46■■□□□ 1.03
HMGN1-207ENST00000436324 ATN1P54259 1190 aaPredicted RBP21.46■■□□□ 1.03
HMGN1-207ENST00000436324 TRDNQ13061 729 aa21.46■■□□□ 1.03
HMGN1-207ENST00000436324 LRRC26Q2I0M4 334 aa21.46■■□□□ 1.03
HMGN1-207ENST00000436324 MAMDC4Q6UXC1 1216 aa21.46■■□□□ 1.03
HMGN1-207ENST00000436324 NSMFQ6X4W1 530 aa21.46■■□□□ 1.03
HMGN1-207ENST00000436324 MSL3Q8N5Y2 521 aaKnown RBP21.46■■□□□ 1.03
HMGN1-207ENST00000436324 ANKS1AQ92625 1134 aa21.46■■□□□ 1.03
HMGN1-207ENST00000436324 TAF6LQ9Y6J9 622 aa21.46■■□□□ 1.03
HMGN1-207ENST00000436324 SYNGAP1Q96PV0 1343 aa21.46■■□□□ 1.03
HMGN1-207ENST00000436324 PLXNA1Q9UIW2 1896 aa21.45■■□□□ 1.02
HMGN1-207ENST00000436324 KBTBD13C9JR72 458 aa21.45■■□□□ 1.02
HMGN1-207ENST00000436324 ZNF467Q7Z7K2 595 aaPredicted RBP21.45■■□□□ 1.02
HMGN1-207ENST00000436324 XPNPEP3Q9NQH7 507 aa21.45■■□□□ 1.02
HMGN1-207ENST00000436324 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.45■■□□□ 1.02
HMGN1-207ENST00000436324 SOWAHBA6NEL2 793 aa21.44■■□□□ 1.02
HMGN1-207ENST00000436324 PGK1P00558 417 aa21.44■■□□□ 1.02
HMGN1-207ENST00000436324 AKR1A1P14550 325 aa21.44■■□□□ 1.02
HMGN1-207ENST00000436324 SYN1P17600 705 aa21.44■■□□□ 1.02
HMGN1-207ENST00000436324 LRRC41Q15345 812 aa21.44■■□□□ 1.02
HMGN1-207ENST00000436324 GPATCH4Q5T3I0 446 aaKnown RBP21.44■■□□□ 1.02
HMGN1-207ENST00000436324 IFIT1BQ5T764 474 aaKnown RBP21.44■■□□□ 1.02
HMGN1-207ENST00000436324 KIAA1211Q6ZU35 1233 aa21.44■■□□□ 1.02
HMGN1-207ENST00000436324 ARMCX2Q7L311 632 aa21.44■■□□□ 1.02
HMGN1-207ENST00000436324 CCDC144CPQ8IYA2 1237 aa21.44■■□□□ 1.02
HMGN1-207ENST00000436324 FAM133AQ8N9E0 248 aa21.44■■□□□ 1.02
HMGN1-207ENST00000436324 PCDH10Q9P2E7 1040 aa21.44■■□□□ 1.02
HMGN1-207ENST00000436324 RBM8AQ9Y5S9 174 aaKnown RBP21.44■■□□□ 1.02
HMGN1-207ENST00000436324 FRMPD3Q5JV73 1810 aa21.43■■□□□ 1.02
HMGN1-207ENST00000436324 E7EWF7 191 aa21.43■■□□□ 1.02
HMGN1-207ENST00000436324 ACVR2BQ13705 512 aa21.43■■□□□ 1.02
HMGN1-207ENST00000436324 MAP4K1Q92918 833 aa21.43■■□□□ 1.02
HMGN1-207ENST00000436324 FERMT2Q96AC1 680 aa21.43■■□□□ 1.02
HMGN1-207ENST00000436324 CCDC136Q96JN2 1154 aa21.43■■□□□ 1.02
HMGN1-207ENST00000436324 PURBQ96QR8 312 aaKnown RBP21.43■■□□□ 1.02
HMGN1-207ENST00000436324 CYP39A1Q9NYL5 469 aa21.43■■□□□ 1.02
HMGN1-207ENST00000436324 FAM184BQ9ULE4 1060 aa21.43■■□□□ 1.02
HMGN1-207ENST00000436324 DDX49Q9Y6V7 483 aaKnown RBP21.43■■□□□ 1.02
HMGN1-207ENST00000436324 NFIBO00712 420 aa21.42■■□□□ 1.02
HMGN1-207ENST00000436324 ADCYAP1R1P41586 468 aa21.42■■□□□ 1.02
HMGN1-207ENST00000436324 BAATQ14032 418 aaPredicted RBP21.42■■□□□ 1.02
HMGN1-207ENST00000436324 STOX1Q6ZVD7 989 aa21.42■■□□□ 1.02
HMGN1-207ENST00000436324 CHST3Q7LGC8 479 aa21.42■■□□□ 1.02
HMGN1-207ENST00000436324 RALYLQ86SE5 291 aaKnown RBP21.42■■□□□ 1.02
HMGN1-207ENST00000436324 ALPK3Q96L96 1907 aa21.42■■□□□ 1.02
HMGN1-207ENST00000436324 RBM27Q9P2N5 1060 aaKnown RBP21.42■■□□□ 1.02
HMGN1-207ENST00000436324 PTPDC1A2A3K4 754 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms