RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 KCNF1Q9H3M0 494 aa22.23■■□□□ 1.15
VRK2-205ENST00000432057 ZNF70Q9UC06 446 aaPredicted RBP22.23■■□□□ 1.15
VRK2-205ENST00000432057 PNMA6FA0A0J9YX94 578 aa22.22■■□□□ 1.15
VRK2-205ENST00000432057 SMTNL1A8MU46 457 aa22.22■■□□□ 1.15
VRK2-205ENST00000432057 USP17L10C9JJH3 530 aa22.22■■□□□ 1.15
VRK2-205ENST00000432057 PTGS1P23219 599 aa22.22■■□□□ 1.15
VRK2-205ENST00000432057 LONP1P36776 959 aaKnown RBP22.22■■□□□ 1.15
VRK2-205ENST00000432057 ADCY7P51828 1080 aa22.22■■□□□ 1.15
VRK2-205ENST00000432057 TGFB2P61812 414 aa22.22■■□□□ 1.15
VRK2-205ENST00000432057 JAG1P78504 1218 aa22.22■■□□□ 1.15
VRK2-205ENST00000432057 SH3RF1Q7Z6J0 888 aa22.22■■□□□ 1.15
VRK2-205ENST00000432057 SIAH1Q8IUQ4 282 aa22.22■■□□□ 1.15
VRK2-205ENST00000432057 PAGE5Q96GU1 130 aa22.22■■□□□ 1.15
VRK2-205ENST00000432057 MTFR1LQ9H019 292 aa22.22■■□□□ 1.15
VRK2-205ENST00000432057 NRBP1Q9UHY1 535 aa22.22■■□□□ 1.15
VRK2-205ENST00000432057 IKBKBO14920 756 aa22.22■■□□□ 1.15
VRK2-205ENST00000432057 RRP1BQ14684 758 aaKnown RBP22.22■■□□□ 1.15
VRK2-205ENST00000432057 E2F4Q16254 413 aa22.22■■□□□ 1.15
VRK2-205ENST00000432057 SLFN13Q68D06 897 aa22.22■■□□□ 1.15
VRK2-205ENST00000432057 OGFOD1Q8N543 542 aa22.22■■□□□ 1.15
VRK2-205ENST00000432057 DCAF4Q8WV16 495 aa22.22■■□□□ 1.15
VRK2-205ENST00000432057 ATAD5Q96QE3 1844 aa22.21■■□□□ 1.15
VRK2-205ENST00000432057 CNTNAP1P78357 1384 aa22.21■■□□□ 1.15
VRK2-205ENST00000432057 TPM3P06753 285 aa22.21■■□□□ 1.15
VRK2-205ENST00000432057 CASP1P29466 404 aa22.21■■□□□ 1.15
VRK2-205ENST00000432057 MORC3Q14149 939 aa22.21■■□□□ 1.15
VRK2-205ENST00000432057 LETM2Q2VYF4 491 aa22.21■■□□□ 1.15
VRK2-205ENST00000432057 PPP1R18Q6NYC8 613 aa22.21■■□□□ 1.15
VRK2-205ENST00000432057 CCDC34Q96HJ3 373 aa22.21■■□□□ 1.15
VRK2-205ENST00000432057 CCNT1O60563 726 aaKnown RBP22.2■■□□□ 1.14
VRK2-205ENST00000432057 GH2P01242 217 aa22.2■■□□□ 1.14
VRK2-205ENST00000432057 POLD1P28340 1107 aa22.2■■□□□ 1.14
VRK2-205ENST00000432057 TPM4P67936 248 aa22.2■■□□□ 1.14
VRK2-205ENST00000432057 MYL5Q02045 173 aa22.2■■□□□ 1.14
VRK2-205ENST00000432057 SPDYE2Q495Y8 402 aa22.2■■□□□ 1.14
VRK2-205ENST00000432057 DTHD1Q6ZMT9 781 aa22.2■■□□□ 1.14
VRK2-205ENST00000432057 CCDC186Q7Z3E2 898 aa22.2■■□□□ 1.14
VRK2-205ENST00000432057 NEK8Q86SG6 692 aa22.2■■□□□ 1.14
VRK2-205ENST00000432057 SPATA20Q8TB22 786 aa22.2■■□□□ 1.14
VRK2-205ENST00000432057 TBCKQ8TEA7 893 aa22.2■■□□□ 1.14
VRK2-205ENST00000432057 MTMR8Q96EF0 704 aa22.2■■□□□ 1.14
VRK2-205ENST00000432057 CDC25AP30304 524 aa22.2■■□□□ 1.14
VRK2-205ENST00000432057 SLC1A4P43007 532 aa22.2■■□□□ 1.14
VRK2-205ENST00000432057 DALRD3Q5D0E6 543 aaKnown RBP22.2■■□□□ 1.14
VRK2-205ENST00000432057 RBM26Q5T8P6 1007 aaKnown RBP22.2■■□□□ 1.14
VRK2-205ENST00000432057 HSD3B7Q9H2F3 369 aa22.2■■□□□ 1.14
VRK2-205ENST00000432057 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.2■■□□□ 1.14
VRK2-205ENST00000432057 LAD1O00515 517 aa22.19■■□□□ 1.14
VRK2-205ENST00000432057 ZBTB5O15062 677 aa22.19■■□□□ 1.14
VRK2-205ENST00000432057 SMC2O95347 1197 aa22.19■■□□□ 1.14
VRK2-205ENST00000432057 LMOD1P29536 600 aaPredicted RBP22.19■■□□□ 1.14
VRK2-205ENST00000432057 CXCL9Q07325 125 aa22.19■■□□□ 1.14
VRK2-205ENST00000432057 R3HDM1Q15032 1099 aaKnown RBP22.19■■□□□ 1.14
VRK2-205ENST00000432057 CCDC144BQ3MJ40 725 aa22.19■■□□□ 1.14
VRK2-205ENST00000432057 PDXDC2PQ6P474 469 aa22.19■■□□□ 1.14
VRK2-205ENST00000432057 TRIML1Q8N9V2 468 aa22.19■■□□□ 1.14
VRK2-205ENST00000432057 IQUBQ8NA54 791 aa22.19■■□□□ 1.14
VRK2-205ENST00000432057 AGBL3Q8NEM8 1001 aa22.19■■□□□ 1.14
VRK2-205ENST00000432057 FAM151AQ8WW52 585 aa22.19■■□□□ 1.14
VRK2-205ENST00000432057 VEZTQ9HBM0 779 aa22.19■■□□□ 1.14
VRK2-205ENST00000432057 PP2D1A8MPX8 630 aa22.18■■□□□ 1.14
VRK2-205ENST00000432057 TXLNAP40222 546 aa22.18■■□□□ 1.14
VRK2-205ENST00000432057 DPYDQ12882 1025 aa22.18■■□□□ 1.14
VRK2-205ENST00000432057 STAMQ92783 540 aa22.18■■□□□ 1.14
VRK2-205ENST00000432057 HERC5Q9UII4 1024 aaKnown RBP22.18■■□□□ 1.14
VRK2-205ENST00000432057 NEMFO60524 1076 aa22.17■■□□□ 1.14
VRK2-205ENST00000432057 OR52Z1P0C646 297 aa22.17■■□□□ 1.14
VRK2-205ENST00000432057 PRPHP41219 470 aa22.17■■□□□ 1.14
VRK2-205ENST00000432057 UBE2SQ16763 222 aa22.17■■□□□ 1.14
VRK2-205ENST00000432057 PYM1Q9BRP8 204 aaKnown RBP22.17■■□□□ 1.14
VRK2-205ENST00000432057 TAOK3Q9H2K8 898 aa22.17■■□□□ 1.14
VRK2-205ENST00000432057 RIC8AQ9NPQ8 531 aa22.17■■□□□ 1.14
VRK2-205ENST00000432057 PPP1R1BQ9UD71 204 aaPredicted RBP22.17■■□□□ 1.14
VRK2-205ENST00000432057 KARSQ15046 597 aaKnown RBP22.17■■□□□ 1.14
VRK2-205ENST00000432057 QRICH1Q2TAL8 776 aa22.17■■□□□ 1.14
VRK2-205ENST00000432057 GMCL1P1Q8NEA9 526 aa22.17■■□□□ 1.14
VRK2-205ENST00000432057 NUP88Q99567 741 aaPredicted RBP22.17■■□□□ 1.14
VRK2-205ENST00000432057 IFNKQ9P0W0 207 aa22.17■■□□□ 1.14
VRK2-205ENST00000432057 F5H6K3 240 aa22.16■■□□□ 1.14
VRK2-205ENST00000432057 NDUFB10O96000 172 aa22.16■■□□□ 1.14
VRK2-205ENST00000432057 ATP1A3P13637 1013 aa22.16■■□□□ 1.14
VRK2-205ENST00000432057 KLRC3Q07444 240 aa22.16■■□□□ 1.14
VRK2-205ENST00000432057 CDAN1Q8IWY9 1227 aa22.16■■□□□ 1.14
VRK2-205ENST00000432057 MLKLQ8NB16 471 aa22.16■■□□□ 1.14
VRK2-205ENST00000432057 XPO4Q9C0E2 1151 aaKnown RBP22.16■■□□□ 1.14
VRK2-205ENST00000432057 PYCARDQ9ULZ3 195 aa22.16■■□□□ 1.14
VRK2-205ENST00000432057 POTEDQ86YR6 584 aa22.15■■□□□ 1.14
VRK2-205ENST00000432057 MTMR14Q8NCE2 650 aa22.15■■□□□ 1.14
VRK2-205ENST00000432057 DISC1Q9NRI5 854 aa22.15■■□□□ 1.14
VRK2-205ENST00000432057 DACH1Q9UI36 760 aa22.15■■□□□ 1.14
VRK2-205ENST00000432057 SHTN1A0MZ66 631 aa22.15■■□□□ 1.14
VRK2-205ENST00000432057 NFKBIEO00221 500 aa22.15■■□□□ 1.14
VRK2-205ENST00000432057 STAT6P42226 847 aa22.15■■□□□ 1.14
VRK2-205ENST00000432057 TNNI2P48788 182 aa22.15■■□□□ 1.14
VRK2-205ENST00000432057 FMR1Q06787 632 aaKnown RBP eCLIP22.15■■□□□ 1.14
VRK2-205ENST00000432057 CDC37Q16543 378 aaPredicted RBP22.15■■□□□ 1.14
VRK2-205ENST00000432057 CIAPIN1Q6FI81 312 aa22.15■■□□□ 1.14
VRK2-205ENST00000432057 C17orf53Q8N3J3 647 aaPredicted RBP22.15■■□□□ 1.14
VRK2-205ENST00000432057 CUL5Q93034 780 aa22.15■■□□□ 1.14
VRK2-205ENST00000432057 MTRQ99707 1265 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms