RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 IGDCC4Q8TDY8 1250 aa20.31■□□□□ 0.84
CTDSP1-203ENST00000431127 TMEM87BQ96K49 555 aa20.31■□□□□ 0.84
CTDSP1-203ENST00000431127 RIPK3Q9Y572 518 aa20.31■□□□□ 0.84
CTDSP1-203ENST00000431127 ZNF536O15090 1300 aa20.3■□□□□ 0.84
CTDSP1-203ENST00000431127 COBLO75128 1261 aa20.3■□□□□ 0.84
CTDSP1-203ENST00000431127 ICAM1P05362 532 aa20.3■□□□□ 0.84
CTDSP1-203ENST00000431127 GJB1P08034 283 aa20.3■□□□□ 0.84
CTDSP1-203ENST00000431127 GOLGA8HP0CJ92 632 aa20.3■□□□□ 0.84
CTDSP1-203ENST00000431127 CCL14Q16627 93 aa20.3■□□□□ 0.84
CTDSP1-203ENST00000431127 OLFML2BQ68BL8 750 aa20.3■□□□□ 0.84
CTDSP1-203ENST00000431127 CCDC174Q6PII3 467 aa20.3■□□□□ 0.84
CTDSP1-203ENST00000431127 CATIPQ7Z7H3 387 aa20.3■□□□□ 0.84
CTDSP1-203ENST00000431127 NPLOC4Q8TAT6 608 aa20.3■□□□□ 0.84
CTDSP1-203ENST00000431127 DDX11Q96FC9 970 aa20.3■□□□□ 0.84
CTDSP1-203ENST00000431127 AGBL1Q96MI9 1066 aa20.3■□□□□ 0.84
CTDSP1-203ENST00000431127 UNC93B1Q9H1C4 597 aa20.3■□□□□ 0.84
CTDSP1-203ENST00000431127 HMX1Q9NP08 348 aaPredicted RBP20.3■□□□□ 0.84
CTDSP1-203ENST00000431127 ZNF236Q9UL36 1845 aa20.3■□□□□ 0.84
CTDSP1-203ENST00000431127 RPTORQ8N122 1335 aa20.29■□□□□ 0.84
CTDSP1-203ENST00000431127 BRCA2P51587 3418 aa20.29■□□□□ 0.84
CTDSP1-203ENST00000431127 CAPN2P17655 700 aa20.29■□□□□ 0.84
CTDSP1-203ENST00000431127 MAP3K21Q5TCX8 1036 aa20.29■□□□□ 0.84
CTDSP1-203ENST00000431127 NEK1Q96PY6 1258 aa20.29■□□□□ 0.84
CTDSP1-203ENST00000431127 ACAD9Q9H845 621 aa20.29■□□□□ 0.84
CTDSP1-203ENST00000431127 CCPG1Q9ULG6 757 aa20.29■□□□□ 0.84
CTDSP1-203ENST00000431127 DIS3Q9Y2L1 958 aaKnown RBP20.29■□□□□ 0.84
CTDSP1-203ENST00000431127 HMGB1P09429 215 aaKnown RBP20.28■□□□□ 0.84
CTDSP1-203ENST00000431127 PRKAR2AP13861 404 aaKnown RBP20.28■□□□□ 0.84
CTDSP1-203ENST00000431127 HSPA4P34932 840 aa20.28■□□□□ 0.84
CTDSP1-203ENST00000431127 SNAP25P60880 206 aa20.28■□□□□ 0.84
CTDSP1-203ENST00000431127 ANKRD35Q8N283 1001 aa20.28■□□□□ 0.84
CTDSP1-203ENST00000431127 KCNB2Q92953 911 aa20.28■□□□□ 0.84
CTDSP1-203ENST00000431127 TRERF1Q96PN7 1200 aa20.28■□□□□ 0.84
CTDSP1-203ENST00000431127 UBA5Q9GZZ9 404 aa20.28■□□□□ 0.84
CTDSP1-203ENST00000431127 HOMER2Q9NSB8 354 aa20.28■□□□□ 0.84
CTDSP1-203ENST00000431127 RNF146Q9NTX7 359 aa20.28■□□□□ 0.84
CTDSP1-203ENST00000431127 ALAS1P13196 640 aa20.27■□□□□ 0.84
CTDSP1-203ENST00000431127 LIFRP42702 1097 aa20.27■□□□□ 0.84
CTDSP1-203ENST00000431127 GJA8P48165 433 aa20.27■□□□□ 0.84
CTDSP1-203ENST00000431127 TRIM32Q13049 653 aa20.27■□□□□ 0.84
CTDSP1-203ENST00000431127 RASEFQ8IZ41 740 aa20.27■□□□□ 0.84
CTDSP1-203ENST00000431127 MAML3Q96JK9 1138 aa20.27■□□□□ 0.84
CTDSP1-203ENST00000431127 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.27■□□□□ 0.847e-7■■■□□ 15.6
CTDSP1-203ENST00000431127 LY9Q9HBG7 655 aa20.27■□□□□ 0.84
CTDSP1-203ENST00000431127 PAK6Q9NQU5 681 aaPredicted RBP20.27■□□□□ 0.84
CTDSP1-203ENST00000431127 FLRT1Q9NZU1 646 aa20.27■□□□□ 0.84
CTDSP1-203ENST00000431127 WDR19Q8NEZ3 1342 aa20.27■□□□□ 0.83
CTDSP1-203ENST00000431127 KLRF2D3W0D1 207 aa20.26■□□□□ 0.83
CTDSP1-203ENST00000431127 SH2B2O14492 632 aaPredicted RBP20.26■□□□□ 0.83
CTDSP1-203ENST00000431127 EIF5BO60841 1220 aaKnown RBP20.26■□□□□ 0.83
CTDSP1-203ENST00000431127 IGHA2P01877 340 aa20.26■□□□□ 0.83
CTDSP1-203ENST00000431127 PGK2P07205 417 aa20.26■□□□□ 0.83
CTDSP1-203ENST00000431127 CACNB2Q08289 660 aaPredicted RBP20.26■□□□□ 0.83
CTDSP1-203ENST00000431127 TROAPQ12815 778 aa20.26■□□□□ 0.83
CTDSP1-203ENST00000431127 ZNF792Q3KQV3 632 aa20.26■□□□□ 0.83
CTDSP1-203ENST00000431127 NFXL1Q6ZNB6 911 aa20.26■□□□□ 0.83
CTDSP1-203ENST00000431127 DHX32Q7L7V1 743 aaKnown RBP20.26■□□□□ 0.83
CTDSP1-203ENST00000431127 ADGRF4Q8IZF3 695 aa20.26■□□□□ 0.83
CTDSP1-203ENST00000431127 MAP3K14Q99558 947 aa20.26■□□□□ 0.83
CTDSP1-203ENST00000431127 SENP2Q9HC62 589 aa20.26■□□□□ 0.83
CTDSP1-203ENST00000431127 RBBP6Q7Z6E9 1792 aaKnown RBP20.26■□□□□ 0.83
CTDSP1-203ENST00000431127 PFASO15067 1338 aa20.26■□□□□ 0.83
CTDSP1-203ENST00000431127 DNAJC25-GNG10A0A024R161 153 aa20.25■□□□□ 0.83
CTDSP1-203ENST00000431127 PALM3A6NDB9 673 aaPredicted RBP20.25■□□□□ 0.83
CTDSP1-203ENST00000431127 CCDC69A6NI79 296 aa20.25■□□□□ 0.83
CTDSP1-203ENST00000431127 DHX16O60231 1041 aaKnown RBP20.25■□□□□ 0.83
CTDSP1-203ENST00000431127 DDAH1O94760 285 aa20.25■□□□□ 0.83
CTDSP1-203ENST00000431127 GRM4Q14833 912 aa20.25■□□□□ 0.83
CTDSP1-203ENST00000431127 MSL3Q8N5Y2 521 aaKnown RBP20.25■□□□□ 0.83
CTDSP1-203ENST00000431127 U2AF1L4Q8WU68 220 aaKnown RBP20.25■□□□□ 0.83
CTDSP1-203ENST00000431127 MAD2L2Q9UI95 211 aa20.25■□□□□ 0.83
CTDSP1-203ENST00000431127 SGPL1O95470 568 aa20.24■□□□□ 0.83
CTDSP1-203ENST00000431127 CALM1P0DP23 149 aa20.24■□□□□ 0.83
CTDSP1-203ENST00000431127 CALM2P0DP24 149 aa20.24■□□□□ 0.83
CTDSP1-203ENST00000431127 CALM3P0DP25 149 aa20.24■□□□□ 0.83
CTDSP1-203ENST00000431127 KIF5BP33176 963 aa20.24■□□□□ 0.83
CTDSP1-203ENST00000431127 CYP2C19P33261 490 aa20.24■□□□□ 0.83
CTDSP1-203ENST00000431127 ZNF654Q8IZM8 581 aa20.24■□□□□ 0.83
CTDSP1-203ENST00000431127 STAG2Q8N3U4 1231 aa20.24■□□□□ 0.83
CTDSP1-203ENST00000431127 DEFB118Q96PH6 123 aa20.24■□□□□ 0.83
CTDSP1-203ENST00000431127 CPVLQ9H3G5 476 aa20.24■□□□□ 0.83
CTDSP1-203ENST00000431127 PSMA5P28066 241 aa20.23■□□□□ 0.83
CTDSP1-203ENST00000431127 EXOSC10Q01780 885 aaKnown RBP20.23■□□□□ 0.83
CTDSP1-203ENST00000431127 CDC37Q16543 378 aaPredicted RBP20.23■□□□□ 0.83
CTDSP1-203ENST00000431127 ADCK5Q3MIX3 580 aa20.23■□□□□ 0.83
CTDSP1-203ENST00000431127 ZNF467Q7Z7K2 595 aaPredicted RBP20.23■□□□□ 0.83
CTDSP1-203ENST00000431127 CTCFLQ8NI51 663 aaPredicted RBP20.23■□□□□ 0.83
CTDSP1-203ENST00000431127 NUP133Q8WUM0 1156 aa20.23■□□□□ 0.83
CTDSP1-203ENST00000431127 USP26Q9BXU7 913 aa20.23■□□□□ 0.83
CTDSP1-203ENST00000431127 A1CFQ9NQ94 594 aaKnown RBP20.23■□□□□ 0.83
CTDSP1-203ENST00000431127 GPHNQ9NQX3 736 aaPredicted RBP20.23■□□□□ 0.83
CTDSP1-203ENST00000431127 NRBP1Q9UHY1 535 aa20.23■□□□□ 0.83
CTDSP1-203ENST00000431127 SNX14Q9Y5W7 946 aa20.23■□□□□ 0.83
CTDSP1-203ENST00000431127 SLC12A7Q9Y666 1083 aa20.23■□□□□ 0.83
CTDSP1-203ENST00000431127 POTEB2H3BUK9 544 aa20.22■□□□□ 0.83
CTDSP1-203ENST00000431127 TFRCP02786 760 aaKnown RBP20.22■□□□□ 0.83
CTDSP1-203ENST00000431127 MUM1L1Q5H9M0 696 aa20.22■□□□□ 0.83
CTDSP1-203ENST00000431127 SYNE3Q6ZMZ3 975 aa20.22■□□□□ 0.83
CTDSP1-203ENST00000431127 SGMS1Q86VZ5 419 aa20.22■□□□□ 0.83
CTDSP1-203ENST00000431127 TINF2Q9BSI4 451 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms