RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 SPAG1Q07617 926 aa9.87□□□□□ -0.83
GABPB1-205ENST00000429662 NAA30Q147X3 362 aaPredicted RBP9.87□□□□□ -0.83
GABPB1-205ENST00000429662 NR1I3Q14994 352 aa9.87□□□□□ -0.83
GABPB1-205ENST00000429662 ARHGAP29Q52LW3 1261 aa9.87□□□□□ -0.83
GABPB1-205ENST00000429662 ISM2Q6H9L7 571 aa9.87□□□□□ -0.83
GABPB1-205ENST00000429662 BICDL1Q6ZP65 573 aa9.87□□□□□ -0.83
GABPB1-205ENST00000429662 ZNF771Q7L3S4 317 aaPredicted RBP9.87□□□□□ -0.83
GABPB1-205ENST00000429662 PPFIBP1Q86W92 1011 aa9.87□□□□□ -0.83
GABPB1-205ENST00000429662 TMEM139Q8IV31 216 aa9.87□□□□□ -0.83
GABPB1-205ENST00000429662 SYNE4Q8N205 404 aa9.87□□□□□ -0.83
GABPB1-205ENST00000429662 TMC2Q8TDI7 906 aa9.87□□□□□ -0.83
GABPB1-205ENST00000429662 DPF2Q92785 391 aa9.87□□□□□ -0.83
GABPB1-205ENST00000429662 TOMM22Q9NS69 142 aa9.87□□□□□ -0.83
GABPB1-205ENST00000429662 DENND2AQ9ULE3 1009 aa9.87□□□□□ -0.83
GABPB1-205ENST00000429662 MYH3P11055 1940 aa9.86□□□□□ -0.83
GABPB1-205ENST00000429662 DOCK2Q92608 1830 aa9.86□□□□□ -0.83
GABPB1-205ENST00000429662 MAGEB6P1A0A0J9YX57 407 aa9.86□□□□□ -0.83
GABPB1-205ENST00000429662 CCDC66A2RUB6 948 aa9.86□□□□□ -0.83
GABPB1-205ENST00000429662 VWA3AA6NCI4 1184 aa9.86□□□□□ -0.83
GABPB1-205ENST00000429662 TADA3O75528 432 aa9.86□□□□□ -0.83
GABPB1-205ENST00000429662 URI1O94763 535 aaPredicted RBP9.86□□□□□ -0.83
GABPB1-205ENST00000429662 TUBBP07437 444 aa9.86□□□□□ -0.83
GABPB1-205ENST00000429662 FGRP09769 529 aa9.86□□□□□ -0.83
GABPB1-205ENST00000429662 CCDC175P0C221 793 aa9.86□□□□□ -0.83
GABPB1-205ENST00000429662 BMP6P22004 513 aa9.86□□□□□ -0.83
GABPB1-205ENST00000429662 CYP7A1P22680 504 aa9.86□□□□□ -0.83
GABPB1-205ENST00000429662 PDE4BQ07343 736 aa9.86□□□□□ -0.83
GABPB1-205ENST00000429662 UBE4AQ14139 1066 aa9.86□□□□□ -0.83
GABPB1-205ENST00000429662 TRIM14Q14142 442 aa9.86□□□□□ -0.83
GABPB1-205ENST00000429662 SEC23AQ15436 765 aa9.86□□□□□ -0.83
GABPB1-205ENST00000429662 TERF2Q15554 542 aa9.86□□□□□ -0.83
GABPB1-205ENST00000429662 ERCC6LQ2NKX8 1250 aa9.86□□□□□ -0.83
GABPB1-205ENST00000429662 RRP12Q5JTH9 1297 aaKnown RBP9.86□□□□□ -0.83
GABPB1-205ENST00000429662 TEX35Q5T0J7 233 aa9.86□□□□□ -0.83
GABPB1-205ENST00000429662 SUSD4Q5VX71 490 aa9.86□□□□□ -0.83
GABPB1-205ENST00000429662 SH3RF1Q7Z6J0 888 aa9.86□□□□□ -0.83
GABPB1-205ENST00000429662 IQCA1Q86XH1 822 aa9.86□□□□□ -0.83
GABPB1-205ENST00000429662 FAM177A1Q8N128 213 aaPredicted RBP9.86□□□□□ -0.83
GABPB1-205ENST00000429662 LCORLQ8N3X6 602 aa9.86□□□□□ -0.83
GABPB1-205ENST00000429662 ANKRD20A12PQ8NF67 263 aa9.86□□□□□ -0.83
GABPB1-205ENST00000429662 CNKSR1Q969H4 720 aa9.86□□□□□ -0.83
GABPB1-205ENST00000429662 MYL10Q9BUA6 226 aa9.86□□□□□ -0.83
GABPB1-205ENST00000429662 PHF20Q9BVI0 1012 aa9.86□□□□□ -0.83
GABPB1-205ENST00000429662 KCNJ14Q9UNX9 436 aa9.86□□□□□ -0.83
GABPB1-205ENST00000429662 ZNF652Q9Y2D9 606 aa9.86□□□□□ -0.83
GABPB1-205ENST00000429662 POLR2AP24928 1970 aaKnown RBP9.85□□□□□ -0.83
GABPB1-205ENST00000429662 ZNF804BA4D1E1 1349 aa9.85□□□□□ -0.83
GABPB1-205ENST00000429662 PDS5AQ29RF7 1337 aaKnown RBP9.85□□□□□ -0.83
GABPB1-205ENST00000429662 ITIH6Q6UXX5 1313 aa9.85□□□□□ -0.83
GABPB1-205ENST00000429662 GUCY1A2P33402 732 aa9.85□□□□□ -0.83
GABPB1-205ENST00000429662 PBX2P40425 430 aa9.85□□□□□ -0.83
GABPB1-205ENST00000429662 GNG11P61952 73 aa9.85□□□□□ -0.83
GABPB1-205ENST00000429662 SOGA3Q5TF21 947 aa9.85□□□□□ -0.83
GABPB1-205ENST00000429662 CNGA4Q8IV77 575 aa9.85□□□□□ -0.83
GABPB1-205ENST00000429662 PDILTQ8N807 584 aa9.85□□□□□ -0.83
GABPB1-205ENST00000429662 TC2NQ8N9U0 490 aa9.85□□□□□ -0.83
GABPB1-205ENST00000429662 NUP133Q8WUM0 1156 aa9.85□□□□□ -0.83
GABPB1-205ENST00000429662 RABGGTAQ92696 567 aa9.85□□□□□ -0.83
GABPB1-205ENST00000429662 MASTLQ96GX5 879 aa9.85□□□□□ -0.83
GABPB1-205ENST00000429662 ZSCAN10Q96SZ4 725 aaPredicted RBP9.85□□□□□ -0.83
GABPB1-205ENST00000429662 CSRNP2Q9H175 543 aa9.85□□□□□ -0.83
GABPB1-205ENST00000429662 CABP5Q9NP86 173 aa9.85□□□□□ -0.83
GABPB1-205ENST00000429662 INTS13Q9NVM9 706 aa9.85□□□□□ -0.83
GABPB1-205ENST00000429662 RMND1Q9NWS8 449 aa9.85□□□□□ -0.83
GABPB1-205ENST00000429662 PCDHB6Q9Y5E3 794 aa9.85□□□□□ -0.83
GABPB1-205ENST00000429662 PAPPA2Q9BXP8 1791 aa9.84□□□□□ -0.83
GABPB1-205ENST00000429662 TNKSO95271 1327 aa9.84□□□□□ -0.83
GABPB1-205ENST00000429662 SPTBN5Q9NRC6 3674 aaKnown RBP9.84□□□□□ -0.83
GABPB1-205ENST00000429662 TMEM232C9JQI7 657 aa9.84□□□□□ -0.83
GABPB1-205ENST00000429662 PRKAB2O43741 272 aa9.84□□□□□ -0.83
GABPB1-205ENST00000429662 ORC4O43929 436 aa9.84□□□□□ -0.83
GABPB1-205ENST00000429662 ZRANB2O95218 330 aaKnown RBP eCLIP9.84□□□□□ -0.83
GABPB1-205ENST00000429662 CCDC178Q5BJE1 867 aa9.84□□□□□ -0.83
GABPB1-205ENST00000429662 CAVIN4Q5BKX8 364 aa9.84□□□□□ -0.83
GABPB1-205ENST00000429662 IFIT1BQ5T764 474 aaKnown RBP9.84□□□□□ -0.83
GABPB1-205ENST00000429662 CLEC4GQ6UXB4 293 aa9.84□□□□□ -0.83
GABPB1-205ENST00000429662 PAXIP1Q6ZW49 1069 aaPredicted RBP9.84□□□□□ -0.83
GABPB1-205ENST00000429662 CEP112Q8N8E3 955 aa9.84□□□□□ -0.83
GABPB1-205ENST00000429662 IQUBQ8NA54 791 aa9.84□□□□□ -0.83
GABPB1-205ENST00000429662 HELBQ8NG08 1087 aaPredicted RBP9.84□□□□□ -0.83
GABPB1-205ENST00000429662 NKX2-3Q8TAU0 364 aa9.84□□□□□ -0.83
GABPB1-205ENST00000429662 GOLGA1Q92805 767 aa9.84□□□□□ -0.83
GABPB1-205ENST00000429662 MYO1AQ9UBC5 1043 aa9.84□□□□□ -0.83
GABPB1-205ENST00000429662 PGAP2Q9UHJ9 254 aa9.84□□□□□ -0.83
GABPB1-205ENST00000429662 MRFAP1Q9Y605 127 aa9.84□□□□□ -0.83
GABPB1-205ENST00000429662 KIF5CO60282 957 aa9.83□□□□□ -0.84
GABPB1-205ENST00000429662 CAMTA2O94983 1202 aa9.83□□□□□ -0.84
GABPB1-205ENST00000429662 MYL1P05976 194 aa9.83□□□□□ -0.84
GABPB1-205ENST00000429662 FECHP22830 423 aa9.83□□□□□ -0.84
GABPB1-205ENST00000429662 CALML3P27482 149 aa9.83□□□□□ -0.84
GABPB1-205ENST00000429662 BCAMP50895 628 aa9.83□□□□□ -0.84
GABPB1-205ENST00000429662 PPP2R3AQ06190 1150 aa9.83□□□□□ -0.84
GABPB1-205ENST00000429662 CHRNDQ07001 517 aa9.83□□□□□ -0.84
GABPB1-205ENST00000429662 DPYDQ12882 1025 aa9.83□□□□□ -0.84
GABPB1-205ENST00000429662 NR5A1Q13285 461 aa9.83□□□□□ -0.84
GABPB1-205ENST00000429662 CUL4BQ13620 913 aa9.83□□□□□ -0.84
GABPB1-205ENST00000429662 BRD3Q15059 726 aa9.83□□□□□ -0.84
GABPB1-205ENST00000429662 CDKAL1Q5VV42 579 aa9.83□□□□□ -0.84
GABPB1-205ENST00000429662 ARL6IP4Q66PJ3 421 aaKnown RBP9.83□□□□□ -0.84
GABPB1-205ENST00000429662 TMTC1Q8IUR5 882 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms