RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 EDC3Q96F86 508 aaKnown RBP10.98□□□□□ -0.65
NEDD1-203ENST00000429527 FSD1Q9BTV5 496 aa10.98□□□□□ -0.65
NEDD1-203ENST00000429527 UBXN6Q9BZV1 441 aa10.98□□□□□ -0.65
NEDD1-203ENST00000429527 MAF1Q9H063 256 aa10.98□□□□□ -0.65
NEDD1-203ENST00000429527 TMX2Q9Y320 296 aa10.98□□□□□ -0.65
NEDD1-203ENST00000429527 PLA2G6O60733 806 aa10.97□□□□□ -0.65
NEDD1-203ENST00000429527 CNMDO75829 334 aa10.97□□□□□ -0.65
NEDD1-203ENST00000429527 MKRN3Q13064 507 aaKnown RBP10.97□□□□□ -0.65
NEDD1-203ENST00000429527 C17orf53Q8N3J3 647 aaPredicted RBP10.97□□□□□ -0.65
NEDD1-203ENST00000429527 KIF18AQ8NI77 898 aa10.97□□□□□ -0.65
NEDD1-203ENST00000429527 EPB41L4AQ9HCS5 686 aaPredicted RBP10.97□□□□□ -0.65
NEDD1-203ENST00000429527 TUBE1Q9UJT0 475 aa10.97□□□□□ -0.65
NEDD1-203ENST00000429527 M0R2C6 588 aa10.97□□□□□ -0.65
NEDD1-203ENST00000429527 FCGRTP55899 365 aa10.97□□□□□ -0.65
NEDD1-203ENST00000429527 KIF22Q14807 665 aa10.97□□□□□ -0.65
NEDD1-203ENST00000429527 TREML2Q5T2D2 321 aa10.97□□□□□ -0.65
NEDD1-203ENST00000429527 Q6ZUG5 572 aa10.97□□□□□ -0.65
NEDD1-203ENST00000429527 BRAPQ7Z569 592 aa10.97□□□□□ -0.65
NEDD1-203ENST00000429527 CCAR2Q8N163 923 aaKnown RBP10.97□□□□□ -0.65
NEDD1-203ENST00000429527 CCDC150Q8NCX0 1101 aa10.97□□□□□ -0.65
NEDD1-203ENST00000429527 EFCC1Q9HA90 598 aa10.97□□□□□ -0.65
NEDD1-203ENST00000429527 NYAP2Q9P242 653 aa10.97□□□□□ -0.65
NEDD1-203ENST00000429527 CLIP2Q9UDT6 1046 aa10.97□□□□□ -0.65
NEDD1-203ENST00000429527 HPSEQ9Y251 543 aa10.97□□□□□ -0.65
NEDD1-203ENST00000429527 USP17L15C9J2P7 530 aa10.97□□□□□ -0.65
NEDD1-203ENST00000429527 USP17L13C9JLJ4 530 aa10.97□□□□□ -0.65
NEDD1-203ENST00000429527 USP17L11C9JVI0 530 aa10.97□□□□□ -0.65
NEDD1-203ENST00000429527 USP17L18D6R9N7 530 aa10.97□□□□□ -0.65
NEDD1-203ENST00000429527 USP17L22D6RA61 530 aa10.97□□□□□ -0.65
NEDD1-203ENST00000429527 USP17L17D6RBQ6 530 aa10.97□□□□□ -0.65
NEDD1-203ENST00000429527 USP17L19D6RCP7 530 aa10.97□□□□□ -0.65
NEDD1-203ENST00000429527 USP17L20D6RJB6 530 aa10.97□□□□□ -0.65
NEDD1-203ENST00000429527 USP17L24Q0WX57 530 aa10.97□□□□□ -0.65
NEDD1-203ENST00000429527 CRACR2BQ8N4Y2 399 aaPredicted RBP10.97□□□□□ -0.65
NEDD1-203ENST00000429527 MSL3Q8N5Y2 521 aaKnown RBP10.97□□□□□ -0.65
NEDD1-203ENST00000429527 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.97□□□□□ -0.65
NEDD1-203ENST00000429527 SH2D4AQ9H788 454 aa10.97□□□□□ -0.65
NEDD1-203ENST00000429527 ORC4O43929 436 aa10.96□□□□□ -0.65
NEDD1-203ENST00000429527 CDK8P49336 464 aa10.96□□□□□ -0.65
NEDD1-203ENST00000429527 C11orf57Q6ZUT1 292 aaPredicted RBP10.96□□□□□ -0.65
NEDD1-203ENST00000429527 SLAIN1Q8ND83 568 aa10.96□□□□□ -0.65
NEDD1-203ENST00000429527 ZNF397Q8NF99 534 aaPredicted RBP10.96□□□□□ -0.65
NEDD1-203ENST00000429527 ASCC2Q9H1I8 757 aaPredicted RBP10.96□□□□□ -0.65
NEDD1-203ENST00000429527 TCP11L1Q9NUJ3 509 aa10.96□□□□□ -0.65
NEDD1-203ENST00000429527 PHLPP2Q6ZVD8 1323 aa10.96□□□□□ -0.65
NEDD1-203ENST00000429527 XRCC5P13010 732 aaKnown RBP10.96□□□□□ -0.66
NEDD1-203ENST00000429527 POTEEQ6S8J3 1075 aa10.96□□□□□ -0.66
NEDD1-203ENST00000429527 TRIM47Q96LD4 638 aa10.96□□□□□ -0.66
NEDD1-203ENST00000429527 TMOD4Q9NZQ9 345 aa10.96□□□□□ -0.66
NEDD1-203ENST00000429527 SLC4A4Q9Y6R1 1079 aa10.96□□□□□ -0.66
NEDD1-203ENST00000429527 GPAA1O43292 621 aa10.96□□□□□ -0.66
NEDD1-203ENST00000429527 ATP8B1O43520 1251 aa10.96□□□□□ -0.66
NEDD1-203ENST00000429527 FDPSP14324 419 aaKnown RBP10.96□□□□□ -0.66
NEDD1-203ENST00000429527 SPP2Q13103 211 aa10.96□□□□□ -0.66
NEDD1-203ENST00000429527 NCAPHQ15003 741 aa10.96□□□□□ -0.66
NEDD1-203ENST00000429527 AMOTL1Q8IY63 956 aa10.96□□□□□ -0.66
NEDD1-203ENST00000429527 MB21D1Q8N884 522 aa10.96□□□□□ -0.66
NEDD1-203ENST00000429527 GMCL1P1Q8NEA9 526 aa10.96□□□□□ -0.66
NEDD1-203ENST00000429527 MCM9Q9NXL9 1143 aa10.96□□□□□ -0.66
NEDD1-203ENST00000429527 SAP30BPQ9UHR5 308 aaKnown RBP10.96□□□□□ -0.66
NEDD1-203ENST00000429527 GJD2Q9UKL4 321 aa10.96□□□□□ -0.66
NEDD1-203ENST00000429527 RABGAP1Q9Y3P9 1069 aa10.96□□□□□ -0.66
NEDD1-203ENST00000429527 PLXNA1Q9UIW2 1896 aa10.95□□□□□ -0.66
NEDD1-203ENST00000429527 JAK2O60674 1132 aa10.95□□□□□ -0.66
NEDD1-203ENST00000429527 GH2P01242 217 aa10.95□□□□□ -0.66
NEDD1-203ENST00000429527 PDIA3P30101 505 aaKnown RBP10.95□□□□□ -0.66
NEDD1-203ENST00000429527 MORN1Q5T089 497 aa10.95□□□□□ -0.66
NEDD1-203ENST00000429527 UBE2Q1Q7Z7E8 422 aa10.95□□□□□ -0.66
NEDD1-203ENST00000429527 LINC00301Q8NCQ3 95 aa10.95□□□□□ -0.66
NEDD1-203ENST00000429527 TRIM34Q9BYJ4 488 aa10.95□□□□□ -0.66
NEDD1-203ENST00000429527 HSD3B7Q9H2F3 369 aa10.95□□□□□ -0.66
NEDD1-203ENST00000429527 ZNF287Q9HBT7 754 aa10.95□□□□□ -0.66
NEDD1-203ENST00000429527 CABP5Q9NP86 173 aa10.95□□□□□ -0.66
NEDD1-203ENST00000429527 ATP2A1O14983 1001 aa10.95□□□□□ -0.66
NEDD1-203ENST00000429527 WDR46O15213 610 aaKnown RBP10.95□□□□□ -0.66
NEDD1-203ENST00000429527 PRKAB2O43741 272 aa10.95□□□□□ -0.66
NEDD1-203ENST00000429527 POLR3DP05423 398 aaPredicted RBP10.95□□□□□ -0.66
NEDD1-203ENST00000429527 TNNT1P13805 278 aa10.95□□□□□ -0.66
NEDD1-203ENST00000429527 RASA1P20936 1047 aa10.95□□□□□ -0.66
NEDD1-203ENST00000429527 COPB2P35606 906 aa10.95□□□□□ -0.66
NEDD1-203ENST00000429527 ABRAQ8N0Z2 381 aa10.95□□□□□ -0.66
NEDD1-203ENST00000429527 KCNG4Q8TDN1 519 aa10.95□□□□□ -0.66
NEDD1-203ENST00000429527 DNAJC25Q9H1X3 360 aa10.95□□□□□ -0.66
NEDD1-203ENST00000429527 NRBP1Q9UHY1 535 aa10.95□□□□□ -0.66
NEDD1-203ENST00000429527 HOXC6P09630 235 aa10.94□□□□□ -0.66
NEDD1-203ENST00000429527 SLURP2P0DP57 97 aa10.94□□□□□ -0.66
NEDD1-203ENST00000429527 MTMR2Q13614 643 aa10.94□□□□□ -0.66
NEDD1-203ENST00000429527 CT47A1Q5JQC4 288 aaPredicted RBP10.94□□□□□ -0.66
NEDD1-203ENST00000429527 CEP135Q66GS9 1140 aa10.94□□□□□ -0.66
NEDD1-203ENST00000429527 MB21D2Q8IYB1 491 aaPredicted RBP10.94□□□□□ -0.66
NEDD1-203ENST00000429527 IFNL3Q8IZI9 196 aa10.94□□□□□ -0.66
NEDD1-203ENST00000429527 SDR42E1Q8WUS8 393 aa10.94□□□□□ -0.66
NEDD1-203ENST00000429527 KANSL2Q9H9L4 492 aa10.94□□□□□ -0.66
NEDD1-203ENST00000429527 PTPDC1A2A3K4 754 aa10.94□□□□□ -0.66
NEDD1-203ENST00000429527 MAPK4P31152 587 aa10.94□□□□□ -0.66
NEDD1-203ENST00000429527 LRMPQ12912 555 aa10.94□□□□□ -0.66
NEDD1-203ENST00000429527 RCSD1Q6JBY9 416 aa10.94□□□□□ -0.66
NEDD1-203ENST00000429527 GADL1Q6ZQY3 521 aa10.94□□□□□ -0.66
NEDD1-203ENST00000429527 SOCS4Q8WXH5 440 aa10.94□□□□□ -0.66
NEDD1-203ENST00000429527 MTA3Q9BTC8 594 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms