RNA–Protein interactions for RNA: ENST00000429162.2

CASC4-203, Transcript of cancer susceptibility 4, humanhuman

TSL 2

Gene CASC4, Length 1,918 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-203ENST00000429162 NYAP2Q9P242 653 aa22.43■■□□□ 1.18
CASC4-203ENST00000429162 ERCC5P28715 1186 aaPredicted RBP22.43■■□□□ 1.18
CASC4-203ENST00000429162 LRRC8AQ8IWT6 810 aa22.43■■□□□ 1.18
CASC4-203ENST00000429162 DCAF4Q8WV16 495 aa22.43■■□□□ 1.18
CASC4-203ENST00000429162 TMEM60Q9H2L4 133 aa22.43■■□□□ 1.18
CASC4-203ENST00000429162 OR52Z1P0C646 297 aa22.42■■□□□ 1.18
CASC4-203ENST00000429162 ATP1A3P13637 1013 aa22.42■■□□□ 1.18
CASC4-203ENST00000429162 LETM2Q2VYF4 491 aa22.42■■□□□ 1.18
CASC4-203ENST00000429162 TMEM179Q6ZVK1 233 aa22.42■■□□□ 1.18
CASC4-203ENST00000429162 ADGRF4Q8IZF3 695 aa22.42■■□□□ 1.18
CASC4-203ENST00000429162 MKL1Q969V6 931 aa22.42■■□□□ 1.18
CASC4-203ENST00000429162 PDGFDQ9GZP0 370 aaPredicted RBP22.42■■□□□ 1.18
CASC4-203ENST00000429162 TDRD3Q9H7E2 651 aaKnown RBP22.42■■□□□ 1.18
CASC4-203ENST00000429162 FAM196BA6NMK8 535 aa22.41■■□□□ 1.18
CASC4-203ENST00000429162 GTPBP6O43824 516 aaPredicted RBP22.41■■□□□ 1.18
CASC4-203ENST00000429162 CCNT1O60563 726 aaKnown RBP22.41■■□□□ 1.18
CASC4-203ENST00000429162 SERPINC1P01008 464 aa22.41■■□□□ 1.18
CASC4-203ENST00000429162 TERF1P54274 439 aa22.41■■□□□ 1.18
CASC4-203ENST00000429162 RSBN1LQ6PCB5 846 aaPredicted RBP22.41■■□□□ 1.18
CASC4-203ENST00000429162 DISC1Q9NRI5 854 aa22.41■■□□□ 1.18
CASC4-203ENST00000429162 FANCLQ9NW38 375 aa22.41■■□□□ 1.18
CASC4-203ENST00000429162 TMOD2Q9NZR1 351 aa22.41■■□□□ 1.18
CASC4-203ENST00000429162 KIF13BQ9NQT8 1826 aa22.41■■□□□ 1.18
CASC4-203ENST00000429162 STAT6P42226 847 aa22.41■■□□□ 1.18
CASC4-203ENST00000429162 DNTTIP2Q5QJE6 756 aaKnown RBP22.41■■□□□ 1.18
CASC4-203ENST00000429162 TBCKQ8TEA7 893 aa22.41■■□□□ 1.18
CASC4-203ENST00000429162 COA7Q96BR5 231 aa22.41■■□□□ 1.18
CASC4-203ENST00000429162 AK8Q96MA6 479 aa22.41■■□□□ 1.18
CASC4-203ENST00000429162 ARFGEF1Q9Y6D6 1849 aa22.4■■□□□ 1.18
CASC4-203ENST00000429162 SLURP2P0DP57 97 aa22.4■■□□□ 1.18
CASC4-203ENST00000429162 EEF2P13639 858 aaKnown RBP22.4■■□□□ 1.18
CASC4-203ENST00000429162 FMR1Q06787 632 aaKnown RBP eCLIP22.4■■□□□ 1.18
CASC4-203ENST00000429162 JAKMIP3Q5VZ66 844 aa22.4■■□□□ 1.18
CASC4-203ENST00000429162 TMC6Q7Z403 805 aa22.4■■□□□ 1.18
CASC4-203ENST00000429162 CCDC150Q8NCX0 1101 aa22.4■■□□□ 1.18
CASC4-203ENST00000429162 CCSER1Q9C0I3 900 aa22.4■■□□□ 1.18
CASC4-203ENST00000429162 BIN2Q9UBW5 565 aaPredicted RBP22.4■■□□□ 1.18
CASC4-203ENST00000429162 ZBTB5O15062 677 aa22.39■■□□□ 1.18
CASC4-203ENST00000429162 UBA7P41226 1012 aa22.39■■□□□ 1.18
CASC4-203ENST00000429162 UBASH3AP57075 661 aa22.39■■□□□ 1.18
CASC4-203ENST00000429162 ICA1Q05084 483 aa22.39■■□□□ 1.18
CASC4-203ENST00000429162 TTBK2Q6IQ55 1244 aa22.39■■□□□ 1.18
CASC4-203ENST00000429162 DEFB132Q7Z7B7 95 aa22.39■■□□□ 1.18
CASC4-203ENST00000429162 LARGE2Q8N3Y3 721 aa22.39■■□□□ 1.18
CASC4-203ENST00000429162 RASSF8Q8NHQ8 419 aa22.39■■□□□ 1.18
CASC4-203ENST00000429162 MTMR8Q96EF0 704 aa22.39■■□□□ 1.18
CASC4-203ENST00000429162 VPS33BQ9H267 617 aa22.39■■□□□ 1.18
CASC4-203ENST00000429162 RIC8AQ9NPQ8 531 aa22.39■■□□□ 1.18
CASC4-203ENST00000429162 RMND1Q9NWS8 449 aa22.39■■□□□ 1.18
CASC4-203ENST00000429162 HDAC9Q9UKV0 1011 aa22.39■■□□□ 1.18
CASC4-203ENST00000429162 R3HCC1Q9Y3T6 440 aaKnown RBP22.39■■□□□ 1.18
CASC4-203ENST00000429162 NFE2L3Q9Y4A8 694 aa22.39■■□□□ 1.18
CASC4-203ENST00000429162 KARSQ15046 597 aaKnown RBP22.39■■□□□ 1.17
CASC4-203ENST00000429162 ABCB5Q2M3G0 1257 aa22.39■■□□□ 1.17
CASC4-203ENST00000429162 KCTD1Q719H9 257 aa22.39■■□□□ 1.17
CASC4-203ENST00000429162 PRMT6Q96LA8 375 aaPredicted RBP22.39■■□□□ 1.17
CASC4-203ENST00000429162 DPEP1P16444 411 aa22.38■■□□□ 1.17
CASC4-203ENST00000429162 CASP1P29466 404 aa22.38■■□□□ 1.17
CASC4-203ENST00000429162 RRAGBQ5VZM2 374 aa22.38■■□□□ 1.17
CASC4-203ENST00000429162 SLFN13Q68D06 897 aa22.38■■□□□ 1.17
CASC4-203ENST00000429162 TMEM260Q9NX78 707 aa22.38■■□□□ 1.17
CASC4-203ENST00000429162 SYNRGQ9UMZ2 1314 aa22.38■■□□□ 1.17
CASC4-203ENST00000429162 ZNF18P17022 549 aa22.37■■□□□ 1.17
CASC4-203ENST00000429162 SEPT2Q15019 361 aa22.37■■□□□ 1.17
CASC4-203ENST00000429162 CUL5Q93034 780 aa22.37■■□□□ 1.17
CASC4-203ENST00000429162 MAGEF1Q9HAY2 307 aa22.37■■□□□ 1.17
CASC4-203ENST00000429162 SPDYE2BA6NHP3 402 aa22.37■■□□□ 1.17
CASC4-203ENST00000429162 VIL1P09327 827 aaKnown RBP22.37■■□□□ 1.17
CASC4-203ENST00000429162 SPDYE6P0CI01 402 aa22.37■■□□□ 1.17
CASC4-203ENST00000429162 SLC1A4P43007 532 aa22.37■■□□□ 1.17
CASC4-203ENST00000429162 TRMT44Q8IYL2 757 aaKnown RBP22.37■■□□□ 1.17
CASC4-203ENST00000429162 CUEDC2Q9H467 287 aa22.37■■□□□ 1.17
CASC4-203ENST00000429162 USP17L10C9JJH3 530 aa22.36■■□□□ 1.17
CASC4-203ENST00000429162 PPP1R11O60927 126 aaPredicted RBP22.36■■□□□ 1.17
CASC4-203ENST00000429162 MYL1P05976 194 aa22.36■■□□□ 1.17
CASC4-203ENST00000429162 KCNA3P22001 575 aa22.36■■□□□ 1.17
CASC4-203ENST00000429162 SLC16A2P36021 539 aa22.36■■□□□ 1.17
CASC4-203ENST00000429162 ARID5BQ14865 1188 aa22.36■■□□□ 1.17
CASC4-203ENST00000429162 GMCL1P1Q8NEA9 526 aa22.36■■□□□ 1.17
CASC4-203ENST00000429162 STAMQ92783 540 aa22.36■■□□□ 1.17
CASC4-203ENST00000429162 CSRNP1Q96S65 589 aa22.36■■□□□ 1.17
CASC4-203ENST00000429162 GLT8D2Q9H1C3 349 aa22.36■■□□□ 1.17
CASC4-203ENST00000429162 HERC5Q9UII4 1024 aaKnown RBP22.36■■□□□ 1.17
CASC4-203ENST00000429162 PP2D1A8MPX8 630 aa22.35■■□□□ 1.17
CASC4-203ENST00000429162 PSMD14O00487 310 aa22.35■■□□□ 1.17
CASC4-203ENST00000429162 GDF11O95390 407 aa22.35■■□□□ 1.17
CASC4-203ENST00000429162 TPM2P07951 284 aa22.35■■□□□ 1.17
CASC4-203ENST00000429162 CDC25AP30304 524 aa22.35■■□□□ 1.17
CASC4-203ENST00000429162 MRPL12P52815 198 aaKnown RBP22.35■■□□□ 1.17
CASC4-203ENST00000429162 CUL4BQ13620 913 aa22.35■■□□□ 1.17
CASC4-203ENST00000429162 SHROOM1Q2M3G4 852 aaPredicted RBP22.35■■□□□ 1.17
CASC4-203ENST00000429162 RBM26Q5T8P6 1007 aaKnown RBP22.35■■□□□ 1.17
CASC4-203ENST00000429162 GMLQ99445 158 aa22.35■■□□□ 1.17
CASC4-203ENST00000429162 MTRQ99707 1265 aa22.35■■□□□ 1.17
CASC4-203ENST00000429162 BLZF1Q9H2G9 400 aa22.35■■□□□ 1.17
CASC4-203ENST00000429162 ZNF277Q9NRM2 450 aaPredicted RBP22.35■■□□□ 1.17
CASC4-203ENST00000429162 COL4A5P29400 1685 aa22.35■■□□□ 1.17
CASC4-203ENST00000429162 RAD17O75943 681 aa22.35■■□□□ 1.17
CASC4-203ENST00000429162 SKILP12757 684 aa22.35■■□□□ 1.17
CASC4-203ENST00000429162 CDK11BP21127 795 aaKnown RBP22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms