RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 RAD50Q92878 1312 aa18.86■□□□□ 0.61
HLA-DQB2-230ENST00000427449 EVI5O60447 810 aa18.86■□□□□ 0.61
HLA-DQB2-230ENST00000427449 ADAMTS4O75173 837 aa18.86■□□□□ 0.61
HLA-DQB2-230ENST00000427449 TOP1P11387 765 aaKnown RBP18.86■□□□□ 0.61
HLA-DQB2-230ENST00000427449 C7orf61Q8IZ16 206 aa18.86■□□□□ 0.61
HLA-DQB2-230ENST00000427449 DIAPH3Q9NSV4 1193 aa18.86■□□□□ 0.61
HLA-DQB2-230ENST00000427449 ZBED4O75132 1171 aa18.85■□□□□ 0.61
HLA-DQB2-230ENST00000427449 CHMLP26374 656 aa18.85■□□□□ 0.61
HLA-DQB2-230ENST00000427449 CNTN2Q02246 1040 aa18.85■□□□□ 0.61
HLA-DQB2-230ENST00000427449 PTH1RQ03431 593 aa18.85■□□□□ 0.61
HLA-DQB2-230ENST00000427449 RRP12Q5JTH9 1297 aaKnown RBP18.85■□□□□ 0.61
HLA-DQB2-230ENST00000427449 GJC2Q5T442 439 aaPredicted RBP18.85■□□□□ 0.61
HLA-DQB2-230ENST00000427449 SKAP1Q86WV1 359 aa18.85■□□□□ 0.61
HLA-DQB2-230ENST00000427449 CHST13Q8NET6 341 aa18.85■□□□□ 0.61
HLA-DQB2-230ENST00000427449 ANKS1AQ92625 1134 aa18.85■□□□□ 0.61
HLA-DQB2-230ENST00000427449 DDX49Q9Y6V7 483 aaKnown RBP18.85■□□□□ 0.61
HLA-DQB2-230ENST00000427449 FRMPD2Q68DX3 1309 aaPredicted RBP18.84■□□□□ 0.61
HLA-DQB2-230ENST00000427449 SOWAHBA6NEL2 793 aa18.84■□□□□ 0.61
HLA-DQB2-230ENST00000427449 HIP1O00291 1037 aa18.84■□□□□ 0.61
HLA-DQB2-230ENST00000427449 CTAGE5O15320 804 aa18.84■□□□□ 0.61
HLA-DQB2-230ENST00000427449 FDX1P10109 184 aa18.84■□□□□ 0.61
HLA-DQB2-230ENST00000427449 SLC16A2P36021 539 aa18.84■□□□□ 0.61
HLA-DQB2-230ENST00000427449 IRX5P78411 483 aaPredicted RBP18.84■□□□□ 0.61
HLA-DQB2-230ENST00000427449 ZNF543Q08ER8 600 aa18.84■□□□□ 0.61
HLA-DQB2-230ENST00000427449 COL9A3Q14050 684 aaPredicted RBP18.84■□□□□ 0.61
HLA-DQB2-230ENST00000427449 LRRC41Q15345 812 aa18.84■□□□□ 0.61
HLA-DQB2-230ENST00000427449 PPP4R3BQ5MIZ7 849 aa18.84■□□□□ 0.61
HLA-DQB2-230ENST00000427449 CCSAPQ6IQ19 270 aaPredicted RBP18.84■□□□□ 0.61
HLA-DQB2-230ENST00000427449 MFSD6Q6ZSS7 791 aa18.84■□□□□ 0.61
HLA-DQB2-230ENST00000427449 MSL3Q8N5Y2 521 aaKnown RBP18.84■□□□□ 0.61
HLA-DQB2-230ENST00000427449 ZKSCAN3Q9BRR0 538 aa18.84■□□□□ 0.61
HLA-DQB2-230ENST00000427449 RNF146Q9NTX7 359 aa18.84■□□□□ 0.61
HLA-DQB2-230ENST00000427449 B4E1Z4 1266 aa18.83■□□□□ 0.6
HLA-DQB2-230ENST00000427449 CNGA1P29973 690 aa18.83■□□□□ 0.6
HLA-DQB2-230ENST00000427449 MFAP1P55081 439 aaKnown RBP18.83■□□□□ 0.6
HLA-DQB2-230ENST00000427449 ENAHQ8N8S7 591 aaPredicted RBP18.83■□□□□ 0.6
HLA-DQB2-230ENST00000427449 CHURC1Q8WUH1 139 aa18.83■□□□□ 0.6
HLA-DQB2-230ENST00000427449 HOMER2Q9NSB8 354 aa18.83■□□□□ 0.6
HLA-DQB2-230ENST00000427449 SLC5A4Q9NY91 659 aa18.83■□□□□ 0.6
HLA-DQB2-230ENST00000427449 ZMYND8Q9ULU4 1186 aaPredicted RBP18.83■□□□□ 0.6
HLA-DQB2-230ENST00000427449 NR2E3Q9Y5X4 410 aa18.83■□□□□ 0.6
HLA-DQB2-230ENST00000427449 COL6A3P12111 3177 aa18.83■□□□□ 0.6
HLA-DQB2-230ENST00000427449 SYNRGQ9UMZ2 1314 aa18.82■□□□□ 0.6
HLA-DQB2-230ENST00000427449 MYADML2A6NDP7 307 aa18.82■□□□□ 0.6
HLA-DQB2-230ENST00000427449 KDM4AO75164 1064 aa18.82■□□□□ 0.6
HLA-DQB2-230ENST00000427449 ICAM1P05362 532 aa18.82■□□□□ 0.6
HLA-DQB2-230ENST00000427449 SEC23AQ15436 765 aa18.82■□□□□ 0.6
HLA-DQB2-230ENST00000427449 SLC35G1Q2M3R5 365 aa18.82■□□□□ 0.6
HLA-DQB2-230ENST00000427449 STOX1Q6ZVD7 989 aa18.82■□□□□ 0.6
HLA-DQB2-230ENST00000427449 CLEC4DQ8WXI8 215 aa18.82■□□□□ 0.6
HLA-DQB2-230ENST00000427449 TTC14Q96N46 770 aa18.82■□□□□ 0.6
HLA-DQB2-230ENST00000427449 PURBQ96QR8 312 aaKnown RBP18.82■□□□□ 0.6
HLA-DQB2-230ENST00000427449 CPVLQ9H3G5 476 aa18.82■□□□□ 0.6
HLA-DQB2-230ENST00000427449 ACAD9Q9H845 621 aa18.82■□□□□ 0.6
HLA-DQB2-230ENST00000427449 SOX1O00570 391 aaPredicted RBP18.81■□□□□ 0.6
HLA-DQB2-230ENST00000427449 ZNF213O14771 459 aa18.81■□□□□ 0.6
HLA-DQB2-230ENST00000427449 SGSM2O43147 1006 aa18.81■□□□□ 0.6
HLA-DQB2-230ENST00000427449 CYP21A2P08686 494 aa18.81■□□□□ 0.6
HLA-DQB2-230ENST00000427449 SYN1P17600 705 aa18.81■□□□□ 0.6
HLA-DQB2-230ENST00000427449 PTGS1P23219 599 aa18.81■□□□□ 0.6
HLA-DQB2-230ENST00000427449 SYDE2Q5VT97 1194 aa18.81■□□□□ 0.6
HLA-DQB2-230ENST00000427449 CYB5R4Q7L1T6 521 aa18.81■□□□□ 0.6
HLA-DQB2-230ENST00000427449 ARMCX2Q7L311 632 aa18.81■□□□□ 0.6
HLA-DQB2-230ENST00000427449 KLHDC9Q8NEP7 349 aa18.81■□□□□ 0.6
HLA-DQB2-230ENST00000427449 MORC4Q8TE76 937 aa18.81■□□□□ 0.6
HLA-DQB2-230ENST00000427449 RNF41Q9H4P4 317 aaPredicted RBP18.81■□□□□ 0.6
HLA-DQB2-230ENST00000427449 TOMM22Q9NS69 142 aa18.81■□□□□ 0.6
HLA-DQB2-230ENST00000427449 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.81■□□□□ 0.6
HLA-DQB2-230ENST00000427449 CYP39A1Q9NYL5 469 aa18.81■□□□□ 0.6
HLA-DQB2-230ENST00000427449 ZSWIM5Q9P217 1185 aa18.81■□□□□ 0.6
HLA-DQB2-230ENST00000427449 FBXO40Q9UH90 709 aa18.81■□□□□ 0.6
HLA-DQB2-230ENST00000427449 PHF24Q9UPV7 400 aa18.81■□□□□ 0.6
HLA-DQB2-230ENST00000427449 NFIBO00712 420 aa18.8■□□□□ 0.6
HLA-DQB2-230ENST00000427449 BMP8BP34820 402 aa18.8■□□□□ 0.6
HLA-DQB2-230ENST00000427449 MAGEA10P43363 369 aaPredicted RBP18.8■□□□□ 0.6
HLA-DQB2-230ENST00000427449 NKX3-2P78367 333 aa18.8■□□□□ 0.6
HLA-DQB2-230ENST00000427449 CCDC96Q2M329 555 aa18.8■□□□□ 0.6
HLA-DQB2-230ENST00000427449 TKFCQ3LXA3 575 aa18.8■□□□□ 0.6
HLA-DQB2-230ENST00000427449 CCDC174Q6PII3 467 aa18.8■□□□□ 0.6
HLA-DQB2-230ENST00000427449 DGKHQ86XP1 1220 aa18.8■□□□□ 0.6
HLA-DQB2-230ENST00000427449 CCDC144CPQ8IYA2 1237 aa18.8■□□□□ 0.6
HLA-DQB2-230ENST00000427449 ESR2Q92731 530 aa18.8■□□□□ 0.6
HLA-DQB2-230ENST00000427449 SENP6Q9GZR1 1112 aaPredicted RBP18.8■□□□□ 0.6
HLA-DQB2-230ENST00000427449 UPF3AQ9H1J1 476 aaKnown RBP18.8■□□□□ 0.6
HLA-DQB2-230ENST00000427449 GPCPD1Q9NPB8 672 aa18.8■□□□□ 0.6
HLA-DQB2-230ENST00000427449 MTMR7Q9Y216 660 aa18.8■□□□□ 0.6
HLA-DQB2-230ENST00000427449 BAZ2BQ9UIF8 2168 aaKnown RBP18.8■□□□□ 0.6
HLA-DQB2-230ENST00000427449 TNKSO95271 1327 aa18.79■□□□□ 0.6
HLA-DQB2-230ENST00000427449 SCN10AQ9Y5Y9 1956 aa18.79■□□□□ 0.6
HLA-DQB2-230ENST00000427449 PGK1P00558 417 aa18.79■□□□□ 0.6
HLA-DQB2-230ENST00000427449 AKR1A1P14550 325 aa18.79■□□□□ 0.6
HLA-DQB2-230ENST00000427449 NT5C2P49902 561 aa18.79■□□□□ 0.6
HLA-DQB2-230ENST00000427449 TMEM63BQ5T3F8 832 aa18.79■□□□□ 0.6
HLA-DQB2-230ENST00000427449 C1orf53Q5VUE5 145 aa18.79■□□□□ 0.6
HLA-DQB2-230ENST00000427449 TRERF1Q96PN7 1200 aa18.79■□□□□ 0.6
HLA-DQB2-230ENST00000427449 XPNPEP3Q9NQH7 507 aa18.79■□□□□ 0.6
HLA-DQB2-230ENST00000427449 WDR19Q8NEZ3 1342 aa18.78■□□□□ 0.6
HLA-DQB2-230ENST00000427449 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.78■□□□□ 0.6
HLA-DQB2-230ENST00000427449 ALAS1P13196 640 aa18.78■□□□□ 0.6
HLA-DQB2-230ENST00000427449 RTP1P59025 263 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms