RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 RASEFQ8IZ41 740 aa11.95□□□□□ -0.5
GACAT3-201ENST00000426539 KLHDC9Q8NEP7 349 aa11.95□□□□□ -0.5
GACAT3-201ENST00000426539 CHMP4CQ96CF2 233 aa11.95□□□□□ -0.5
GACAT3-201ENST00000426539 DDX11Q96FC9 970 aa11.95□□□□□ -0.5
GACAT3-201ENST00000426539 CRBNQ96SW2 442 aa11.95□□□□□ -0.5
GACAT3-201ENST00000426539 IL17RBQ9NRM6 502 aa11.95□□□□□ -0.5
GACAT3-201ENST00000426539 CNPY2Q9Y2B0 182 aa11.95□□□□□ -0.5
GACAT3-201ENST00000426539 ZNFX1Q9P2E3 1918 aaKnown RBP11.95□□□□□ -0.5
GACAT3-201ENST00000426539 TMEM232C9JQI7 657 aa11.94□□□□□ -0.5
GACAT3-201ENST00000426539 NMT2O60551 498 aa11.94□□□□□ -0.5
GACAT3-201ENST00000426539 OAZ1P54368 228 aa11.94□□□□□ -0.5
GACAT3-201ENST00000426539 EPHB4P54760 987 aa11.94□□□□□ -0.5
GACAT3-201ENST00000426539 FAM109BQ6ICB4 259 aaPredicted RBP11.94□□□□□ -0.5
GACAT3-201ENST00000426539 CHST13Q8NET6 341 aa11.94□□□□□ -0.5
GACAT3-201ENST00000426539 GMCL1Q96IK5 515 aa11.94□□□□□ -0.5
GACAT3-201ENST00000426539 GUCD1Q96NT3 240 aa11.94□□□□□ -0.5
GACAT3-201ENST00000426539 KATNBL1Q9H079 304 aa11.94□□□□□ -0.5
GACAT3-201ENST00000426539 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.94□□□□□ -0.5
GACAT3-201ENST00000426539 ZHX1Q9UKY1 873 aaPredicted RBP11.94□□□□□ -0.5
GACAT3-201ENST00000426539 FAM184BQ9ULE4 1060 aa11.94□□□□□ -0.5
GACAT3-201ENST00000426539 SMCHD1A6NHR9 2005 aa11.94□□□□□ -0.5
GACAT3-201ENST00000426539 SLC3A2P08195 630 aaKnown RBP11.93□□□□□ -0.5
GACAT3-201ENST00000426539 CLTBP09497 229 aa11.93□□□□□ -0.5
GACAT3-201ENST00000426539 MCCP23508 829 aa11.93□□□□□ -0.5
GACAT3-201ENST00000426539 NOVP48745 357 aa11.93□□□□□ -0.5
GACAT3-201ENST00000426539 ACLYP53396 1101 aa11.93□□□□□ -0.5
GACAT3-201ENST00000426539 CNTN2Q02246 1040 aa11.93□□□□□ -0.5
GACAT3-201ENST00000426539 ACVR2BQ13705 512 aa11.93□□□□□ -0.5
GACAT3-201ENST00000426539 KCNA10Q16322 511 aa11.93□□□□□ -0.5
GACAT3-201ENST00000426539 ANKRD45Q5TZF3 282 aa11.93□□□□□ -0.5
GACAT3-201ENST00000426539 ARMCX2Q7L311 632 aa11.93□□□□□ -0.5
GACAT3-201ENST00000426539 ANKRD35Q8N283 1001 aa11.93□□□□□ -0.5
GACAT3-201ENST00000426539 STAG1Q8WVM7 1258 aa11.93□□□□□ -0.5
GACAT3-201ENST00000426539 AGBL1Q96MI9 1066 aa11.93□□□□□ -0.5
GACAT3-201ENST00000426539 TSEN34Q9BSV6 310 aaKnown RBP11.93□□□□□ -0.5
GACAT3-201ENST00000426539 HOMER2Q9NSB8 354 aa11.93□□□□□ -0.5
GACAT3-201ENST00000426539 FBXO40Q9UH90 709 aa11.93□□□□□ -0.5
GACAT3-201ENST00000426539 ANAPC4Q9UJX5 808 aa11.93□□□□□ -0.5
GACAT3-201ENST00000426539 CTDP1Q9Y5B0 961 aaPredicted RBP11.93□□□□□ -0.5
GACAT3-201ENST00000426539 PLXNA1Q9UIW2 1896 aa11.93□□□□□ -0.5
GACAT3-201ENST00000426539 DNAH12Q6ZR08 3092 aa11.92□□□□□ -0.5
GACAT3-201ENST00000426539 SOWAHBA6NEL2 793 aa11.92□□□□□ -0.5
GACAT3-201ENST00000426539 KIAA0355O15063 1070 aa11.92□□□□□ -0.5
GACAT3-201ENST00000426539 CTAGE5O15320 804 aa11.92□□□□□ -0.5
GACAT3-201ENST00000426539 PQBP1O60828 265 aaKnown RBP11.92□□□□□ -0.5
GACAT3-201ENST00000426539 DUSP11O75319 330 aaKnown RBP11.92□□□□□ -0.5
GACAT3-201ENST00000426539 FGRP09769 529 aa11.92□□□□□ -0.5
GACAT3-201ENST00000426539 CD44P16070 742 aaKnown RBP11.92□□□□□ -0.5
GACAT3-201ENST00000426539 CST5P28325 142 aaPredicted RBP11.92□□□□□ -0.5
GACAT3-201ENST00000426539 SLC1A4P43007 532 aa11.92□□□□□ -0.5
GACAT3-201ENST00000426539 STAT2P52630 851 aa11.92□□□□□ -0.5
GACAT3-201ENST00000426539 PDE1AP54750 535 aa11.92□□□□□ -0.5
GACAT3-201ENST00000426539 SNAP25P60880 206 aa11.92□□□□□ -0.5
GACAT3-201ENST00000426539 FAAP100Q0VG06 881 aa11.92□□□□□ -0.5
GACAT3-201ENST00000426539 HDAC1Q13547 482 aaPredicted RBP11.92□□□□□ -0.5
GACAT3-201ENST00000426539 CCDC144BQ3MJ40 725 aa11.92□□□□□ -0.5
GACAT3-201ENST00000426539 KCTD1Q719H9 257 aa11.92□□□□□ -0.5
GACAT3-201ENST00000426539 ANKRD33Q7Z3H0 272 aa11.92□□□□□ -0.5
GACAT3-201ENST00000426539 FAM160B2Q86V87 743 aa11.92□□□□□ -0.5
GACAT3-201ENST00000426539 FAM133AQ8N9E0 248 aa11.92□□□□□ -0.5
GACAT3-201ENST00000426539 EVI5LQ96CN4 794 aa11.92□□□□□ -0.5
GACAT3-201ENST00000426539 FAM227BQ96M60 508 aa11.92□□□□□ -0.5
GACAT3-201ENST00000426539 FAM161BQ96MY7 647 aa11.92□□□□□ -0.5
GACAT3-201ENST00000426539 UPF3AQ9H1J1 476 aaKnown RBP11.92□□□□□ -0.5
GACAT3-201ENST00000426539 A1CFQ9NQ94 594 aaKnown RBP11.92□□□□□ -0.5
GACAT3-201ENST00000426539 DDX49Q9Y6V7 483 aaKnown RBP11.92□□□□□ -0.5
GACAT3-201ENST00000426539 COL6A3P12111 3177 aa11.92□□□□□ -0.5
GACAT3-201ENST00000426539 ASTN1O14525 1302 aa11.91□□□□□ -0.5
GACAT3-201ENST00000426539 A0A0D9SFI3 127 aa11.91□□□□□ -0.5
GACAT3-201ENST00000426539 MOXD2PA6NHM9 499 aa11.91□□□□□ -0.5
GACAT3-201ENST00000426539 TSPY2A6NKD2 308 aa11.91□□□□□ -0.5
GACAT3-201ENST00000426539 PLA2G6O60733 806 aa11.91□□□□□ -0.5
GACAT3-201ENST00000426539 FDX1P10109 184 aa11.91□□□□□ -0.5
GACAT3-201ENST00000426539 ALX1Q15699 326 aa11.91□□□□□ -0.5
GACAT3-201ENST00000426539 RCSD1Q6JBY9 416 aa11.91□□□□□ -0.5
GACAT3-201ENST00000426539 CCDC144CPQ8IYA2 1237 aa11.91□□□□□ -0.5
GACAT3-201ENST00000426539 CHURC1Q8WUH1 139 aa11.91□□□□□ -0.5
GACAT3-201ENST00000426539 TOX2Q96NM4 488 aa11.91□□□□□ -0.5
GACAT3-201ENST00000426539 ABHD16BQ9H3Z7 469 aa11.91□□□□□ -0.5
GACAT3-201ENST00000426539 ACAD9Q9H845 621 aa11.91□□□□□ -0.5
GACAT3-201ENST00000426539 STARD7Q9NQZ5 370 aa11.91□□□□□ -0.5
GACAT3-201ENST00000426539 RNF146Q9NTX7 359 aa11.91□□□□□ -0.5
GACAT3-201ENST00000426539 PRR12Q9ULL5 1215 aa11.91□□□□□ -0.5
GACAT3-201ENST00000426539 STX8Q9UNK0 236 aa11.91□□□□□ -0.5
GACAT3-201ENST00000426539 MYH4Q9Y623 1939 aa11.91□□□□□ -0.5
GACAT3-201ENST00000426539 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.9□□□□□ -0.5
GACAT3-201ENST00000426539 C19orf67A6NJJ6 358 aa11.9□□□□□ -0.5
GACAT3-201ENST00000426539 DLL1O00548 723 aa11.9□□□□□ -0.5
GACAT3-201ENST00000426539 ORC4O43929 436 aa11.9□□□□□ -0.5
GACAT3-201ENST00000426539 RANBP6O60518 1105 aaKnown RBP11.9□□□□□ -0.5
GACAT3-201ENST00000426539 PTGS1P23219 599 aa11.9□□□□□ -0.5
GACAT3-201ENST00000426539 CDK7P50613 346 aa11.9□□□□□ -0.5
GACAT3-201ENST00000426539 GJA9P57773 515 aa11.9□□□□□ -0.5
GACAT3-201ENST00000426539 NKX3-2P78367 333 aa11.9□□□□□ -0.5
GACAT3-201ENST00000426539 MUM1L1Q5H9M0 696 aa11.9□□□□□ -0.5
GACAT3-201ENST00000426539 TTBK2Q6IQ55 1244 aa11.9□□□□□ -0.5
GACAT3-201ENST00000426539 CCDC174Q6PII3 467 aa11.9□□□□□ -0.5
GACAT3-201ENST00000426539 ZNF589Q86UQ0 364 aaPredicted RBP11.9□□□□□ -0.5
GACAT3-201ENST00000426539 TRERF1Q96PN7 1200 aa11.9□□□□□ -0.5
GACAT3-201ENST00000426539 HELLSQ9NRZ9 838 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms