RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 TNKSO95271 1327 aa12.84□□□□□ -0.35
USP49-204ENST00000423567 ERICH2A1L162 156 aa12.83□□□□□ -0.36
USP49-204ENST00000423567 SGPL1O95470 568 aa12.83□□□□□ -0.36
USP49-204ENST00000423567 GJA8P48165 433 aa12.83□□□□□ -0.36
USP49-204ENST00000423567 SART3Q15020 963 aaKnown RBP12.83□□□□□ -0.36
USP49-204ENST00000423567 CCL14Q16627 93 aa12.83□□□□□ -0.36
USP49-204ENST00000423567 IFIT1BQ5T764 474 aaKnown RBP12.83□□□□□ -0.36
USP49-204ENST00000423567 PNMA1Q8ND90 353 aa12.83□□□□□ -0.36
USP49-204ENST00000423567 CHST13Q8NET6 341 aa12.83□□□□□ -0.36
USP49-204ENST00000423567 MYH4Q9Y623 1939 aa12.83□□□□□ -0.36
USP49-204ENST00000423567 HTTP42858 3142 aa12.83□□□□□ -0.36
USP49-204ENST00000423567 TTLL13PA6NNM8 815 aa12.82□□□□□ -0.36
USP49-204ENST00000423567 E7EWF7 191 aa12.82□□□□□ -0.36
USP49-204ENST00000423567 TFRCP02786 760 aaKnown RBP12.82□□□□□ -0.36
USP49-204ENST00000423567 PDHBP11177 359 aa12.82□□□□□ -0.36
USP49-204ENST00000423567 TRIM32Q13049 653 aa12.82□□□□□ -0.36
USP49-204ENST00000423567 TKFCQ3LXA3 575 aa12.82□□□□□ -0.36
USP49-204ENST00000423567 GPATCH4Q5T3I0 446 aaKnown RBP12.82□□□□□ -0.36
USP49-204ENST00000423567 MAP3K21Q5TCX8 1036 aa12.82□□□□□ -0.36
USP49-204ENST00000423567 SYDE2Q5VT97 1194 aa12.82□□□□□ -0.36
USP49-204ENST00000423567 OLFML2BQ68BL8 750 aa12.82□□□□□ -0.36
USP49-204ENST00000423567 ANKRD35Q8N283 1001 aa12.82□□□□□ -0.36
USP49-204ENST00000423567 ENAHQ8N8S7 591 aaPredicted RBP12.82□□□□□ -0.36
USP49-204ENST00000423567 NPLOC4Q8TAT6 608 aa12.82□□□□□ -0.36
USP49-204ENST00000423567 ANKS1AQ92625 1134 aa12.82□□□□□ -0.36
USP49-204ENST00000423567 DDX11Q96FC9 970 aa12.82□□□□□ -0.36
USP49-204ENST00000423567 LSG1Q9H089 658 aaKnown RBP12.82□□□□□ -0.36
USP49-204ENST00000423567 GPCPD1Q9NPB8 672 aa12.82□□□□□ -0.36
USP49-204ENST00000423567 PAK6Q9NQU5 681 aaPredicted RBP12.82□□□□□ -0.36
USP49-204ENST00000423567 PNMA2Q9UL42 364 aa12.82□□□□□ -0.36
USP49-204ENST00000423567 PRR12Q9ULL5 1215 aa12.82□□□□□ -0.36
USP49-204ENST00000423567 FRMPD2Q68DX3 1309 aaPredicted RBP12.82□□□□□ -0.36
USP49-204ENST00000423567 RLFQ13129 1914 aa12.82□□□□□ -0.36
USP49-204ENST00000423567 LAMA4Q16363 1823 aa12.81□□□□□ -0.36
USP49-204ENST00000423567 COBLO75128 1261 aa12.81□□□□□ -0.36
USP49-204ENST00000423567 CHRM1P11229 460 aaPredicted RBP12.81□□□□□ -0.36
USP49-204ENST00000423567 CACNB2Q08289 660 aaPredicted RBP12.81□□□□□ -0.36
USP49-204ENST00000423567 ZNF543Q08ER8 600 aa12.81□□□□□ -0.36
USP49-204ENST00000423567 RNF20Q5VTR2 975 aa12.81□□□□□ -0.36
USP49-204ENST00000423567 CCDC174Q6PII3 467 aa12.81□□□□□ -0.36
USP49-204ENST00000423567 BTNL9Q6UXG8 535 aa12.81□□□□□ -0.36
USP49-204ENST00000423567 RASGRP2Q7LDG7 609 aa12.81□□□□□ -0.36
USP49-204ENST00000423567 SLC39A7Q92504 469 aa12.81□□□□□ -0.36
USP49-204ENST00000423567 ACAD9Q9H845 621 aa12.81□□□□□ -0.36
USP49-204ENST00000423567 HOMER2Q9NSB8 354 aa12.81□□□□□ -0.36
USP49-204ENST00000423567 DIS3Q9Y2L1 958 aaKnown RBP12.81□□□□□ -0.36
USP49-204ENST00000423567 RIPK3Q9Y572 518 aa12.81□□□□□ -0.36
USP49-204ENST00000423567 IFIT3O14879 490 aaKnown RBP12.8□□□□□ -0.36
USP49-204ENST00000423567 FARP2O94887 1054 aaPredicted RBP12.8□□□□□ -0.36
USP49-204ENST00000423567 PGK2P07205 417 aa12.8□□□□□ -0.36
USP49-204ENST00000423567 PARP1P09874 1014 aaKnown RBP12.8□□□□□ -0.36
USP49-204ENST00000423567 SNHG28P0DPA3 235 aa12.8□□□□□ -0.36
USP49-204ENST00000423567 ALAS1P13196 640 aa12.8□□□□□ -0.36
USP49-204ENST00000423567 CNGA1P29973 690 aa12.8□□□□□ -0.36
USP49-204ENST00000423567 CYP2C19P33261 490 aa12.8□□□□□ -0.36
USP49-204ENST00000423567 SLC16A2P36021 539 aa12.8□□□□□ -0.36
USP49-204ENST00000423567 TTBK2Q6IQ55 1244 aa12.8□□□□□ -0.36
USP49-204ENST00000423567 SHISA4Q96DD7 197 aa12.8□□□□□ -0.36
USP49-204ENST00000423567 MAML3Q96JK9 1138 aa12.8□□□□□ -0.36
USP49-204ENST00000423567 AGBL1Q96MI9 1066 aa12.8□□□□□ -0.36
USP49-204ENST00000423567 RNF146Q9NTX7 359 aa12.8□□□□□ -0.36
USP49-204ENST00000423567 FLRT1Q9NZU1 646 aa12.8□□□□□ -0.36
USP49-204ENST00000423567 CCPG1Q9ULG6 757 aa12.8□□□□□ -0.36
USP49-204ENST00000423567 CIZ1Q9ULV3 898 aaPredicted RBP12.8□□□□□ -0.36
USP49-204ENST00000423567 KIAA0100Q14667 2235 aaKnown RBP12.8□□□□□ -0.36
USP49-204ENST00000423567 DOCK3Q8IZD9 2030 aa12.79□□□□□ -0.36
USP49-204ENST00000423567 RBBP6Q7Z6E9 1792 aaKnown RBP12.79□□□□□ -0.36
USP49-204ENST00000423567 DHX16O60231 1041 aaKnown RBP12.79□□□□□ -0.36
USP49-204ENST00000423567 MSCO60682 206 aa12.79□□□□□ -0.36
USP49-204ENST00000423567 ICAM1P05362 532 aa12.79□□□□□ -0.36
USP49-204ENST00000423567 C7P10643 843 aa12.79□□□□□ -0.36
USP49-204ENST00000423567 WTAPQ15007 396 aa12.79□□□□□ -0.36
USP49-204ENST00000423567 ASPRV1Q53RT3 343 aa12.79□□□□□ -0.36
USP49-204ENST00000423567 CREB3L3Q68CJ9 461 aa12.79□□□□□ -0.36
USP49-204ENST00000423567 CYB5R4Q7L1T6 521 aa12.79□□□□□ -0.36
USP49-204ENST00000423567 TRERF1Q96PN7 1200 aa12.79□□□□□ -0.36
USP49-204ENST00000423567 RANBP17Q9H2T7 1088 aaKnown RBP12.79□□□□□ -0.36
USP49-204ENST00000423567 METRNQ9UJH8 293 aa12.79□□□□□ -0.36
USP49-204ENST00000423567 PLXNB2O15031 1838 aa12.78□□□□□ -0.36
USP49-204ENST00000423567 PARP14Q460N5 1801 aa12.78□□□□□ -0.36
USP49-204ENST00000423567 ZNF236Q9UL36 1845 aa12.78□□□□□ -0.36
USP49-204ENST00000423567 SLC27A2O14975 620 aa12.78□□□□□ -0.36
USP49-204ENST00000423567 GOLGA8HP0CJ92 632 aa12.78□□□□□ -0.36
USP49-204ENST00000423567 CCND3P30281 292 aaPredicted RBP12.78□□□□□ -0.36
USP49-204ENST00000423567 SNAP25P60880 206 aa12.78□□□□□ -0.36
USP49-204ENST00000423567 SEC23AQ15436 765 aa12.78□□□□□ -0.36
USP49-204ENST00000423567 ZNF792Q3KQV3 632 aa12.78□□□□□ -0.36
USP49-204ENST00000423567 TMEM67Q5HYA8 995 aa12.78□□□□□ -0.36
USP49-204ENST00000423567 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.78□□□□□ -0.36
USP49-204ENST00000423567 MSL3Q8N5Y2 521 aaKnown RBP12.78□□□□□ -0.36
USP49-204ENST00000423567 ANKLE1Q8NAG6 615 aa12.78□□□□□ -0.36
USP49-204ENST00000423567 TINF2Q9BSI4 451 aa12.78□□□□□ -0.36
USP49-204ENST00000423567 HTATIP2Q9BUP3 242 aa12.78□□□□□ -0.36
USP49-204ENST00000423567 CRISPLD2Q9H0B8 497 aa12.78□□□□□ -0.36
USP49-204ENST00000423567 NRBP1Q9UHY1 535 aa12.78□□□□□ -0.36
USP49-204ENST00000423567 CNPY2Q9Y2B0 182 aa12.78□□□□□ -0.36
USP49-204ENST00000423567 PFASO15067 1338 aa12.78□□□□□ -0.36
USP49-204ENST00000423567 ZNF536O15090 1300 aa12.78□□□□□ -0.36
USP49-204ENST00000423567 POTEB2H3BUK9 544 aa12.77□□□□□ -0.37
USP49-204ENST00000423567 CYBAP13498 195 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms