RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 MTFR1LQ9H019 292 aa7.84□□□□□ -1.15
LINC00458-201ENST00000423442 CARS2Q9HA77 564 aaKnown RBP7.84□□□□□ -1.15
LINC00458-201ENST00000423442 ITSN1Q15811 1721 aa7.83□□□□□ -1.16
LINC00458-201ENST00000423442 ARHGEF28Q8N1W1 1705 aaKnown RBP7.83□□□□□ -1.16
LINC00458-201ENST00000423442 ACEP12821 1306 aa7.83□□□□□ -1.16
LINC00458-201ENST00000423442 COL5A2P05997 1499 aaPredicted RBP7.83□□□□□ -1.16
LINC00458-201ENST00000423442 ATP7BP35670 1465 aa7.83□□□□□ -1.16
LINC00458-201ENST00000423442 LRRC37A3O60309 1634 aa7.83□□□□□ -1.16
LINC00458-201ENST00000423442 SLITRK5O94991 958 aa7.83□□□□□ -1.16
LINC00458-201ENST00000423442 AFMP43652 599 aa7.83□□□□□ -1.16
LINC00458-201ENST00000423442 RAP1GAPP47736 663 aa7.83□□□□□ -1.16
LINC00458-201ENST00000423442 PLCB3Q01970 1234 aa7.83□□□□□ -1.16
LINC00458-201ENST00000423442 DDB1Q16531 1140 aa7.83□□□□□ -1.16
LINC00458-201ENST00000423442 TXNRD1Q16881 649 aa7.83□□□□□ -1.16
LINC00458-201ENST00000423442 LLGL2Q6P1M3 1020 aa7.83□□□□□ -1.16
LINC00458-201ENST00000423442 RETREG2Q8NC44 543 aa7.83□□□□□ -1.16
LINC00458-201ENST00000423442 HSPA12BQ96MM6 686 aa7.83□□□□□ -1.16
LINC00458-201ENST00000423442 FOXQ1Q9C009 403 aa7.83□□□□□ -1.16
LINC00458-201ENST00000423442 ATP13A1Q9HD20 1204 aa7.83□□□□□ -1.16
LINC00458-201ENST00000423442 BIN2Q9UBW5 565 aaPredicted RBP7.83□□□□□ -1.16
LINC00458-201ENST00000423442 DCTN4Q9UJW0 460 aa7.83□□□□□ -1.16
LINC00458-201ENST00000423442 CPDO75976 1380 aa7.83□□□□□ -1.16
LINC00458-201ENST00000423442 TREHO43280 583 aa7.82□□□□□ -1.16
LINC00458-201ENST00000423442 CFPP27918 469 aa7.82□□□□□ -1.16
LINC00458-201ENST00000423442 GSTT1P30711 240 aa7.82□□□□□ -1.16
LINC00458-201ENST00000423442 CRB1P82279 1406 aa7.82□□□□□ -1.16
LINC00458-201ENST00000423442 MARCH10Q8NA82 808 aaPredicted RBP7.82□□□□□ -1.16
LINC00458-201ENST00000423442 KIRREL1Q96J84 757 aa7.82□□□□□ -1.16
LINC00458-201ENST00000423442 OSBPL7Q9BZF2 842 aa7.82□□□□□ -1.16
LINC00458-201ENST00000423442 CEP44Q9C0F1 390 aa7.82□□□□□ -1.16
LINC00458-201ENST00000423442 SEMA3GQ9NS98 782 aa7.82□□□□□ -1.16
LINC00458-201ENST00000423442 C19orf73Q9NVV2 129 aa7.82□□□□□ -1.16
LINC00458-201ENST00000423442 LMCD1Q9NZU5 365 aa7.82□□□□□ -1.16
LINC00458-201ENST00000423442 MAPK8IP1Q9UQF2 711 aa7.82□□□□□ -1.16
LINC00458-201ENST00000423442 SAMM50Q9Y512 469 aa7.82□□□□□ -1.16
LINC00458-201ENST00000423442 SHANK3Q9BYB0 1731 aa7.81□□□□□ -1.16
LINC00458-201ENST00000423442 ZBTB7CA1YPR0 619 aa7.81□□□□□ -1.16
LINC00458-201ENST00000423442 LRIG2O94898 1065 aa7.81□□□□□ -1.16
LINC00458-201ENST00000423442 GLI1P08151 1106 aa7.81□□□□□ -1.16
LINC00458-201ENST00000423442 INPP5AQ14642 412 aa7.81□□□□□ -1.16
LINC00458-201ENST00000423442 CDKAL1Q5VV42 579 aa7.81□□□□□ -1.16
LINC00458-201ENST00000423442 MPZL3Q6UWV2 235 aa7.81□□□□□ -1.16
LINC00458-201ENST00000423442 SYDE1Q6ZW31 735 aaPredicted RBP7.81□□□□□ -1.16
LINC00458-201ENST00000423442 CYFIP1Q7L576 1253 aa7.81□□□□□ -1.16
LINC00458-201ENST00000423442 ELMO3Q96BJ8 720 aa7.81□□□□□ -1.16
LINC00458-201ENST00000423442 SETDB2Q96T68 719 aa7.81□□□□□ -1.16
LINC00458-201ENST00000423442 FBRSQ9HAH7 460 aa7.81□□□□□ -1.16
LINC00458-201ENST00000423442 USP19O94966 1318 aa7.8□□□□□ -1.16
LINC00458-201ENST00000423442 AKAP12Q02952 1782 aa7.8□□□□□ -1.16
LINC00458-201ENST00000423442 PRAMEF27A3QJZ7 478 aa7.8□□□□□ -1.16
LINC00458-201ENST00000423442 FAM155AB1AL88 458 aaPredicted RBP7.8□□□□□ -1.16
LINC00458-201ENST00000423442 TSPAN15O95858 294 aa7.8□□□□□ -1.16
LINC00458-201ENST00000423442 GCP02774 474 aa7.8□□□□□ -1.16
LINC00458-201ENST00000423442 PTPN11Q06124 597 aaPredicted RBP7.8□□□□□ -1.16
LINC00458-201ENST00000423442 LRFN4Q6PJG9 635 aa7.8□□□□□ -1.16
LINC00458-201ENST00000423442 TOM1L2Q6ZVM7 507 aa7.8□□□□□ -1.16
LINC00458-201ENST00000423442 HDGFL2Q7Z4V5 671 aaPredicted RBP7.8□□□□□ -1.16
LINC00458-201ENST00000423442 C1QL4Q86Z23 238 aa7.8□□□□□ -1.16
LINC00458-201ENST00000423442 KCT2Q8NC54 265 aa7.8□□□□□ -1.16
LINC00458-201ENST00000423442 ZNF507Q8TCN5 953 aa7.8□□□□□ -1.16
LINC00458-201ENST00000423442 TOX2Q96NM4 488 aa7.8□□□□□ -1.16
LINC00458-201ENST00000423442 TERF2IPQ9NYB0 399 aa7.8□□□□□ -1.16
LINC00458-201ENST00000423442 TPX2Q9ULW0 747 aaKnown RBP7.8□□□□□ -1.16
LINC00458-201ENST00000423442 POLR3AO14802 1390 aaPredicted RBP7.8□□□□□ -1.16
LINC00458-201ENST00000423442 MAP3K5Q99683 1374 aa7.8□□□□□ -1.16
LINC00458-201ENST00000423442 QRICH2Q9H0J4 1663 aa7.79□□□□□ -1.16
LINC00458-201ENST00000423442 CLSPNQ9HAW4 1339 aa7.79□□□□□ -1.16
LINC00458-201ENST00000423442 PPIP5K1Q6PFW1 1433 aa7.79□□□□□ -1.16
LINC00458-201ENST00000423442 TRPM1Q7Z4N2 1603 aa7.79□□□□□ -1.16
LINC00458-201ENST00000423442 GOLGB1Q14789 3259 aaKnown RBP7.79□□□□□ -1.16
LINC00458-201ENST00000423442 H3BS24 57 aa7.79□□□□□ -1.16
LINC00458-201ENST00000423442 CELA3AP09093 270 aa7.79□□□□□ -1.16
LINC00458-201ENST00000423442 ZNF865P0CJ78 1059 aaPredicted RBP7.79□□□□□ -1.16
LINC00458-201ENST00000423442 MAPK1P28482 360 aa7.79□□□□□ -1.16
LINC00458-201ENST00000423442 FGD1P98174 961 aa7.79□□□□□ -1.16
LINC00458-201ENST00000423442 LRRC14Q15048 493 aa7.79□□□□□ -1.16
LINC00458-201ENST00000423442 TMEM67Q5HYA8 995 aa7.79□□□□□ -1.16
LINC00458-201ENST00000423442 WNK3Q9BYP7 1800 aa7.79□□□□□ -1.16
LINC00458-201ENST00000423442 BRD4O60885 1362 aaPredicted RBP7.79□□□□□ -1.16
LINC00458-201ENST00000423442 BCL9O00512 1426 aa7.78□□□□□ -1.16
LINC00458-201ENST00000423442 ST20-MTHFSA0A0A6YYL1 179 aa7.78□□□□□ -1.16
LINC00458-201ENST00000423442 SLBPQ14493 270 aaKnown RBP eCLIP7.78□□□□□ -1.16
LINC00458-201ENST00000423442 NKG7Q16617 165 aa7.78□□□□□ -1.16
LINC00458-201ENST00000423442 SFRP5Q5T4F7 317 aa7.78□□□□□ -1.16
LINC00458-201ENST00000423442 LCNL1Q6ZST4 164 aa7.78□□□□□ -1.16
LINC00458-201ENST00000423442 LRRC56Q8IYG6 542 aaPredicted RBP7.78□□□□□ -1.16
LINC00458-201ENST00000423442 MFSD4AQ8N468 514 aa7.78□□□□□ -1.16
LINC00458-201ENST00000423442 RIN3Q8TB24 985 aa7.78□□□□□ -1.16
LINC00458-201ENST00000423442 PPP1R16BQ96T49 567 aa7.78□□□□□ -1.16
LINC00458-201ENST00000423442 MIPEPQ99797 713 aa7.78□□□□□ -1.16
LINC00458-201ENST00000423442 ARID3AQ99856 593 aa7.78□□□□□ -1.16
LINC00458-201ENST00000423442 PPM1HQ9ULR3 514 aa7.78□□□□□ -1.16
LINC00458-201ENST00000423442 TOPAZ1Q8N9V7 1692 aa7.78□□□□□ -1.16
LINC00458-201ENST00000423442 AATKQ6ZMQ8 1374 aa7.77□□□□□ -1.17
LINC00458-201ENST00000423442 KRT1P04264 644 aa7.77□□□□□ -1.17
LINC00458-201ENST00000423442 GDNFP39905 211 aa7.77□□□□□ -1.17
LINC00458-201ENST00000423442 MAPK8P45983 427 aa7.77□□□□□ -1.17
LINC00458-201ENST00000423442 TMF1P82094 1093 aa7.77□□□□□ -1.17
LINC00458-201ENST00000423442 PCNX4Q63HM2 1172 aa7.77□□□□□ -1.17
LINC00458-201ENST00000423442 NPAS4Q8IUM7 802 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms