RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 HMX1Q9NP08 348 aaPredicted RBP11.3□□□□□ -0.6
HERC3-204ENST00000422770 RNF146Q9NTX7 359 aa11.3□□□□□ -0.6
HERC3-204ENST00000422770 RIPK3Q9Y572 518 aa11.3□□□□□ -0.6
HERC3-204ENST00000422770 CCDC69A6NI79 296 aa11.29□□□□□ -0.6
HERC3-204ENST00000422770 COBLO75128 1261 aa11.29□□□□□ -0.6
HERC3-204ENST00000422770 XRCC5P13010 732 aaKnown RBP11.29□□□□□ -0.6
HERC3-204ENST00000422770 MCM5P33992 734 aa11.29□□□□□ -0.6
HERC3-204ENST00000422770 OAZ1P54368 228 aa11.29□□□□□ -0.6
HERC3-204ENST00000422770 FGD1P98174 961 aa11.29□□□□□ -0.6
HERC3-204ENST00000422770 NECTIN1Q15223 517 aa11.29□□□□□ -0.6
HERC3-204ENST00000422770 USH1GQ495M9 461 aa11.29□□□□□ -0.6
HERC3-204ENST00000422770 ASPRV1Q53RT3 343 aa11.29□□□□□ -0.6
HERC3-204ENST00000422770 NSMFQ6X4W1 530 aa11.29□□□□□ -0.6
HERC3-204ENST00000422770 CATIPQ7Z7H3 387 aa11.29□□□□□ -0.6
HERC3-204ENST00000422770 MB21D2Q8IYB1 491 aaPredicted RBP11.29□□□□□ -0.6
HERC3-204ENST00000422770 USP6NLQ92738 828 aa11.29□□□□□ -0.6
HERC3-204ENST00000422770 TRERF1Q96PN7 1200 aa11.29□□□□□ -0.6
HERC3-204ENST00000422770 LRRC2Q9BYS8 371 aa11.29□□□□□ -0.6
HERC3-204ENST00000422770 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.29□□□□□ -0.6
HERC3-204ENST00000422770 ACAD9Q9H845 621 aa11.29□□□□□ -0.6
HERC3-204ENST00000422770 VAT1LQ9HCJ6 419 aa11.29□□□□□ -0.6
HERC3-204ENST00000422770 FLRT1Q9NZU1 646 aa11.29□□□□□ -0.6
HERC3-204ENST00000422770 FBXO40Q9UH90 709 aa11.29□□□□□ -0.6
HERC3-204ENST00000422770 NAP1L2Q9ULW6 460 aaPredicted RBP11.29□□□□□ -0.6
HERC3-204ENST00000422770 PLA2G6O60733 806 aa11.28□□□□□ -0.6
HERC3-204ENST00000422770 EIF5BO60841 1220 aaKnown RBP11.28□□□□□ -0.6
HERC3-204ENST00000422770 TFRCP02786 760 aaKnown RBP11.28□□□□□ -0.6
HERC3-204ENST00000422770 MYCNP04198 464 aaPredicted RBP11.28□□□□□ -0.6
HERC3-204ENST00000422770 CYP2C19P33261 490 aa11.28□□□□□ -0.6
HERC3-204ENST00000422770 ANTXR2P58335 489 aa11.28□□□□□ -0.6
HERC3-204ENST00000422770 CACNB2Q08289 660 aaPredicted RBP11.28□□□□□ -0.6
HERC3-204ENST00000422770 SEC23AQ15436 765 aa11.28□□□□□ -0.6
HERC3-204ENST00000422770 ABRAQ8N0Z2 381 aa11.28□□□□□ -0.6
HERC3-204ENST00000422770 CHST13Q8NET6 341 aa11.28□□□□□ -0.6
HERC3-204ENST00000422770 U2AF1L4Q8WU68 220 aaKnown RBP11.28□□□□□ -0.6
HERC3-204ENST00000422770 MYL10Q9BUA6 226 aa11.28□□□□□ -0.6
HERC3-204ENST00000422770 SENP2Q9HC62 589 aa11.28□□□□□ -0.6
HERC3-204ENST00000422770 RPTORQ8N122 1335 aa11.28□□□□□ -0.6
HERC3-204ENST00000422770 KIAA0100Q14667 2235 aaKnown RBP11.28□□□□□ -0.6
HERC3-204ENST00000422770 LCTP09848 1927 aa11.27□□□□□ -0.6
HERC3-204ENST00000422770 PTPDC1A2A3K4 754 aa11.27□□□□□ -0.61
HERC3-204ENST00000422770 ATP2A1O14983 1001 aa11.27□□□□□ -0.61
HERC3-204ENST00000422770 ICAM1P05362 532 aa11.27□□□□□ -0.61
HERC3-204ENST00000422770 GJB1P08034 283 aa11.27□□□□□ -0.61
HERC3-204ENST00000422770 CCND3P30281 292 aaPredicted RBP11.27□□□□□ -0.61
HERC3-204ENST00000422770 KRT32Q14532 448 aa11.27□□□□□ -0.61
HERC3-204ENST00000422770 CDC37Q16543 378 aaPredicted RBP11.27□□□□□ -0.61
HERC3-204ENST00000422770 TKFCQ3LXA3 575 aa11.27□□□□□ -0.61
HERC3-204ENST00000422770 BTNL9Q6UXG8 535 aa11.27□□□□□ -0.61
HERC3-204ENST00000422770 HOMER1Q86YM7 354 aa11.27□□□□□ -0.61
HERC3-204ENST00000422770 RAB11FIP4Q86YS3 637 aa11.27□□□□□ -0.61
HERC3-204ENST00000422770 ZNF654Q8IZM8 581 aa11.27□□□□□ -0.61
HERC3-204ENST00000422770 STAG2Q8N3U4 1231 aa11.27□□□□□ -0.61
HERC3-204ENST00000422770 PIBF1Q8WXW3 757 aa11.27□□□□□ -0.61
HERC3-204ENST00000422770 ANKS1AQ92625 1134 aa11.27□□□□□ -0.61
HERC3-204ENST00000422770 MAML3Q96JK9 1138 aa11.27□□□□□ -0.61
HERC3-204ENST00000422770 TCEANC2Q96MN5 208 aa11.27□□□□□ -0.61
HERC3-204ENST00000422770 NEK1Q96PY6 1258 aa11.27□□□□□ -0.61
HERC3-204ENST00000422770 RANBP17Q9H2T7 1088 aaKnown RBP11.27□□□□□ -0.61
HERC3-204ENST00000422770 GPHNQ9NQX3 736 aaPredicted RBP11.27□□□□□ -0.61
HERC3-204ENST00000422770 ZNF536O15090 1300 aa11.27□□□□□ -0.61
HERC3-204ENST00000422770 BAZ2BQ9UIF8 2168 aaKnown RBP11.27□□□□□ -0.61
HERC3-204ENST00000422770 KLRF2D3W0D1 207 aa11.26□□□□□ -0.61
HERC3-204ENST00000422770 POTEB2H3BUK9 544 aa11.26□□□□□ -0.61
HERC3-204ENST00000422770 SLC34A2O95436 690 aa11.26□□□□□ -0.61
HERC3-204ENST00000422770 HOXC6P09630 235 aa11.26□□□□□ -0.61
HERC3-204ENST00000422770 SNHG28P0DPA3 235 aa11.26□□□□□ -0.61
HERC3-204ENST00000422770 MUM1L1Q5H9M0 696 aa11.26□□□□□ -0.61
HERC3-204ENST00000422770 SYNE3Q6ZMZ3 975 aa11.26□□□□□ -0.61
HERC3-204ENST00000422770 CCDC144CPQ8IYA2 1237 aa11.26□□□□□ -0.61
HERC3-204ENST00000422770 RASEFQ8IZ41 740 aa11.26□□□□□ -0.61
HERC3-204ENST00000422770 ADGRF4Q8IZF3 695 aa11.26□□□□□ -0.61
HERC3-204ENST00000422770 CTCFLQ8NI51 663 aaPredicted RBP11.26□□□□□ -0.61
HERC3-204ENST00000422770 TMEM87BQ96K49 555 aa11.26□□□□□ -0.61
HERC3-204ENST00000422770 JAKMIP1Q96N16 626 aaKnown RBP11.26□□□□□ -0.61
HERC3-204ENST00000422770 LY9Q9HBG7 655 aa11.26□□□□□ -0.61
HERC3-204ENST00000422770 TSHZ2Q9NRE2 1034 aa11.26□□□□□ -0.61
HERC3-204ENST00000422770 SH2B2O14492 632 aaPredicted RBP11.25□□□□□ -0.61
HERC3-204ENST00000422770 FARP2O94887 1054 aaPredicted RBP11.25□□□□□ -0.61
HERC3-204ENST00000422770 SGPL1O95470 568 aa11.25□□□□□ -0.61
HERC3-204ENST00000422770 RXRAP19793 462 aa11.25□□□□□ -0.61
HERC3-204ENST00000422770 CALML3P27482 149 aa11.25□□□□□ -0.61
HERC3-204ENST00000422770 GJA8P48165 433 aa11.25□□□□□ -0.61
HERC3-204ENST00000422770 GRM4Q14833 912 aa11.25□□□□□ -0.61
HERC3-204ENST00000422770 ADCK5Q3MIX3 580 aa11.25□□□□□ -0.61
HERC3-204ENST00000422770 PRAMEF19Q5SWL8 479 aa11.25□□□□□ -0.61
HERC3-204ENST00000422770 ANO1Q5XXA6 986 aa11.25□□□□□ -0.61
HERC3-204ENST00000422770 OLFML2BQ68BL8 750 aa11.25□□□□□ -0.61
HERC3-204ENST00000422770 MICU3Q86XE3 530 aa11.25□□□□□ -0.61
HERC3-204ENST00000422770 IGDCC4Q8TDY8 1250 aa11.25□□□□□ -0.61
HERC3-204ENST00000422770 A1CFQ9NQ94 594 aaKnown RBP11.25□□□□□ -0.61
HERC3-204ENST00000422770 MAD2L2Q9UI95 211 aa11.25□□□□□ -0.61
HERC3-204ENST00000422770 CNPY2Q9Y2B0 182 aa11.25□□□□□ -0.61
HERC3-204ENST00000422770 SLC12A7Q9Y666 1083 aa11.25□□□□□ -0.61
HERC3-204ENST00000422770 PFASO15067 1338 aa11.25□□□□□ -0.61
HERC3-204ENST00000422770 HTTP42858 3142 aa11.25□□□□□ -0.61
HERC3-204ENST00000422770 PDE4DIPQ5VU43 2346 aa11.25□□□□□ -0.61
HERC3-204ENST00000422770 LRRC37A2A6NM11 1700 aa11.24□□□□□ -0.61
HERC3-204ENST00000422770 NFIBO00712 420 aa11.24□□□□□ -0.61
HERC3-204ENST00000422770 DDAH1O94760 285 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms