RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 LBX1P52954 281 aa6.15□□□□□ -1.42
CDC42EP3-202ENST00000422687 ST5P78524 1137 aa6.15□□□□□ -1.42
CDC42EP3-202ENST00000422687 MAP2K1Q02750 393 aaPredicted RBP6.15□□□□□ -1.42
CDC42EP3-202ENST00000422687 MLLT1Q03111 559 aaPredicted RBP6.15□□□□□ -1.42
CDC42EP3-202ENST00000422687 FAM160A1Q05DH4 1040 aa6.15□□□□□ -1.42
CDC42EP3-202ENST00000422687 DEFB115Q30KQ5 88 aa6.15□□□□□ -1.42
CDC42EP3-202ENST00000422687 PNMA8AQ86V59 439 aaPredicted RBP6.15□□□□□ -1.42
CDC42EP3-202ENST00000422687 SLITRK4Q8IW52 837 aa6.15□□□□□ -1.42
CDC42EP3-202ENST00000422687 TRIM42Q8IWZ5 723 aa6.15□□□□□ -1.42
CDC42EP3-202ENST00000422687 RTKN2Q8IZC4 609 aa6.15□□□□□ -1.42
CDC42EP3-202ENST00000422687 CNTROBQ8N137 903 aa6.15□□□□□ -1.42
CDC42EP3-202ENST00000422687 TRIM11Q96F44 468 aa6.15□□□□□ -1.42
CDC42EP3-202ENST00000422687 ABHD8Q96I13 439 aa6.15□□□□□ -1.42
CDC42EP3-202ENST00000422687 FMNL2Q96PY5 1086 aa6.15□□□□□ -1.42
CDC42EP3-202ENST00000422687 POLR3GLQ9BT43 218 aa6.15□□□□□ -1.42
CDC42EP3-202ENST00000422687 CLEC4MQ9H2X3 399 aaPredicted RBP6.15□□□□□ -1.42
CDC42EP3-202ENST00000422687 ZNF408Q9H9D4 720 aa6.15□□□□□ -1.42
CDC42EP3-202ENST00000422687 TMEM39AQ9NV64 488 aa6.15□□□□□ -1.42
CDC42EP3-202ENST00000422687 HACL1Q9UJ83 578 aa6.15□□□□□ -1.42
CDC42EP3-202ENST00000422687 SOX13Q9UN79 622 aa6.15□□□□□ -1.42
CDC42EP3-202ENST00000422687 STARD13Q9Y3M8 1113 aa6.15□□□□□ -1.42
CDC42EP3-202ENST00000422687 VIRMAQ69YN4 1812 aaKnown RBP6.15□□□□□ -1.43
CDC42EP3-202ENST00000422687 THSD7BQ9C0I4 1608 aa6.14□□□□□ -1.43
CDC42EP3-202ENST00000422687 SIPA1L3O60292 1781 aaPredicted RBP6.14□□□□□ -1.43
CDC42EP3-202ENST00000422687 GNAT3A8MTJ3 354 aa6.14□□□□□ -1.43
CDC42EP3-202ENST00000422687 KCNQ3O43525 872 aa6.14□□□□□ -1.43
CDC42EP3-202ENST00000422687 B3GALT4O96024 378 aa6.14□□□□□ -1.43
CDC42EP3-202ENST00000422687 ALBP02768 609 aa6.14□□□□□ -1.43
CDC42EP3-202ENST00000422687 PROCP04070 461 aa6.14□□□□□ -1.43
CDC42EP3-202ENST00000422687 TEFQ10587 303 aa6.14□□□□□ -1.43
CDC42EP3-202ENST00000422687 COL9A3Q14050 684 aaPredicted RBP6.14□□□□□ -1.43
CDC42EP3-202ENST00000422687 CRY2Q49AN0 593 aa6.14□□□□□ -1.43
CDC42EP3-202ENST00000422687 PCNX4Q63HM2 1172 aa6.14□□□□□ -1.43
CDC42EP3-202ENST00000422687 ADAMTSL4Q6UY14 1074 aa6.14□□□□□ -1.43
CDC42EP3-202ENST00000422687 C20orf204Q6ZNR8 217 aa6.14□□□□□ -1.43
CDC42EP3-202ENST00000422687 GPC2Q8N158 579 aa6.14□□□□□ -1.43
CDC42EP3-202ENST00000422687 ASAP3Q8TDY4 903 aa6.14□□□□□ -1.43
CDC42EP3-202ENST00000422687 BSNDQ8WZ55 320 aa6.14□□□□□ -1.43
CDC42EP3-202ENST00000422687 PSMD1Q99460 953 aa6.14□□□□□ -1.43
CDC42EP3-202ENST00000422687 SPOCK3Q9BQ16 436 aa6.14□□□□□ -1.43
CDC42EP3-202ENST00000422687 ADAM19Q9H013 955 aa6.14□□□□□ -1.43
CDC42EP3-202ENST00000422687 ZNF277Q9NRM2 450 aaPredicted RBP6.14□□□□□ -1.43
CDC42EP3-202ENST00000422687 UBP1Q9NZI7 540 aa6.14□□□□□ -1.43
CDC42EP3-202ENST00000422687 USP16Q9Y5T5 823 aa6.14□□□□□ -1.43
CDC42EP3-202ENST00000422687 WDR33Q9C0J8 1336 aaKnown RBP6.14□□□□□ -1.43
CDC42EP3-202ENST00000422687 NPC1L1Q9UHC9 1359 aa6.14□□□□□ -1.43
CDC42EP3-202ENST00000422687 BCORQ6W2J9 1755 aa6.13□□□□□ -1.43
CDC42EP3-202ENST00000422687 TLDC2A0PJX2 215 aa6.13□□□□□ -1.43
CDC42EP3-202ENST00000422687 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.13□□□□□ -1.43
CDC42EP3-202ENST00000422687 MSTNO14793 375 aa6.13□□□□□ -1.43
CDC42EP3-202ENST00000422687 GHRHP01286 108 aa6.13□□□□□ -1.43
CDC42EP3-202ENST00000422687 BMP6P22004 513 aa6.13□□□□□ -1.43
CDC42EP3-202ENST00000422687 IARSP41252 1262 aaKnown RBP6.13□□□□□ -1.43
CDC42EP3-202ENST00000422687 SNAP47Q5SQN1 464 aa6.13□□□□□ -1.43
CDC42EP3-202ENST00000422687 RASIP1Q5U651 963 aa6.13□□□□□ -1.43
CDC42EP3-202ENST00000422687 MAP1SQ66K74 1059 aaPredicted RBP6.13□□□□□ -1.43
CDC42EP3-202ENST00000422687 OLFM4Q6UX06 510 aa6.13□□□□□ -1.43
CDC42EP3-202ENST00000422687 HFE2Q6ZVN8 426 aa6.13□□□□□ -1.43
CDC42EP3-202ENST00000422687 VN1R5Q7Z5H4 357 aa6.13□□□□□ -1.43
CDC42EP3-202ENST00000422687 NBPF5PQ86XG9 351 aaPredicted RBP6.13□□□□□ -1.43
CDC42EP3-202ENST00000422687 CKAP2LQ8IYA6 745 aa6.13□□□□□ -1.43
CDC42EP3-202ENST00000422687 SYNE4Q8N205 404 aa6.13□□□□□ -1.43
CDC42EP3-202ENST00000422687 MICALL1Q8N3F8 863 aa6.13□□□□□ -1.43
CDC42EP3-202ENST00000422687 GOLM1Q8NBJ4 401 aa6.13□□□□□ -1.43
CDC42EP3-202ENST00000422687 DDX21Q9NR30 783 aaKnown RBP eCLIP6.13□□□□□ -1.43
CDC42EP3-202ENST00000422687 NAGPAQ9UK23 515 aa6.13□□□□□ -1.43
CDC42EP3-202ENST00000422687 SLC6A14Q9UN76 642 aa6.13□□□□□ -1.43
CDC42EP3-202ENST00000422687 TMA7Q9Y2S6 64 aaKnown RBP6.13□□□□□ -1.43
CDC42EP3-202ENST00000422687 FAM221AA4D161 298 aa6.12□□□□□ -1.43
CDC42EP3-202ENST00000422687 M0R082 166 aa6.12□□□□□ -1.43
CDC42EP3-202ENST00000422687 KLF4O43474 513 aa6.12□□□□□ -1.43
CDC42EP3-202ENST00000422687 SMNDC1O75940 238 aaKnown RBP eCLIP6.12□□□□□ -1.43
CDC42EP3-202ENST00000422687 SSBP05455 408 aaKnown RBP eCLIP6.12□□□□□ -1.43
CDC42EP3-202ENST00000422687 NID1P14543 1247 aa6.12□□□□□ -1.43
CDC42EP3-202ENST00000422687 HSP90B1P14625 803 aaKnown RBP6.12□□□□□ -1.43
CDC42EP3-202ENST00000422687 EIF2AK2P19525 551 aaKnown RBP6.12□□□□□ -1.43
CDC42EP3-202ENST00000422687 COL4A5P29400 1685 aa6.12□□□□□ -1.43
CDC42EP3-202ENST00000422687 ALDH1B1P30837 517 aa6.12□□□□□ -1.43
CDC42EP3-202ENST00000422687 HOXA10P31260 410 aaPredicted RBP6.12□□□□□ -1.43
CDC42EP3-202ENST00000422687 PCDH1Q08174 1060 aa6.12□□□□□ -1.43
CDC42EP3-202ENST00000422687 APOBRQ0VD83 1088 aa6.12□□□□□ -1.43
CDC42EP3-202ENST00000422687 ZNF423Q2M1K9 1284 aa6.12□□□□□ -1.43
CDC42EP3-202ENST00000422687 RIC1Q4ADV7 1423 aa6.12□□□□□ -1.43
CDC42EP3-202ENST00000422687 CST9Q5W186 159 aa6.12□□□□□ -1.43
CDC42EP3-202ENST00000422687 RNF123Q5XPI4 1314 aa6.12□□□□□ -1.43
CDC42EP3-202ENST00000422687 ZNF746Q6NUN9 644 aaPredicted RBP6.12□□□□□ -1.43
CDC42EP3-202ENST00000422687 ZNF417Q8TAU3 575 aa6.12□□□□□ -1.43
CDC42EP3-202ENST00000422687 GATAD2BQ8WXI9 593 aa6.12□□□□□ -1.43
CDC42EP3-202ENST00000422687 MKL1Q969V6 931 aa6.12□□□□□ -1.43
CDC42EP3-202ENST00000422687 PLD4Q96BZ4 506 aa6.12□□□□□ -1.43
CDC42EP3-202ENST00000422687 ZNF587Q96SQ5 575 aaPredicted RBP6.12□□□□□ -1.43
CDC42EP3-202ENST00000422687 UBE2OQ9C0C9 1292 aaKnown RBP6.12□□□□□ -1.43
CDC42EP3-202ENST00000422687 RBSNQ9H1K0 784 aa6.12□□□□□ -1.43
CDC42EP3-202ENST00000422687 ZSWIM4Q9H7M6 989 aa6.12□□□□□ -1.43
CDC42EP3-202ENST00000422687 FRRS1LQ9P0K9 344 aa6.12□□□□□ -1.43
CDC42EP3-202ENST00000422687 GPN3Q9UHW5 284 aaPredicted RBP6.12□□□□□ -1.43
CDC42EP3-202ENST00000422687 ZNF652Q9Y2D9 606 aa6.12□□□□□ -1.43
CDC42EP3-202ENST00000422687 LTBP1Q14766 1721 aa6.11□□□□□ -1.43
CDC42EP3-202ENST00000422687 IBTKQ9P2D0 1353 aaPredicted RBP6.11□□□□□ -1.43
CDC42EP3-202ENST00000422687 KIF7Q2M1P5 1343 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms