RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 SOCS4Q8WXH5 440 aa24.05■■□□□ 1.44
HMGXB4-203ENST00000420166 UPF3BQ9BZI7 483 aaKnown RBP24.05■■□□□ 1.44
HMGXB4-203ENST00000420166 GJD2Q9UKL4 321 aa24.05■■□□□ 1.44
HMGXB4-203ENST00000420166 RIPK3Q9Y572 518 aa24.05■■□□□ 1.44
HMGXB4-203ENST00000420166 SLC15A5A6NIM6 579 aa24.04■■□□□ 1.44
HMGXB4-203ENST00000420166 PTPREP23469 700 aa24.04■■□□□ 1.44
HMGXB4-203ENST00000420166 KIF5BP33176 963 aa24.04■■□□□ 1.44
HMGXB4-203ENST00000420166 MORN1Q5T089 497 aa24.04■■□□□ 1.44
HMGXB4-203ENST00000420166 SYNE3Q6ZMZ3 975 aa24.04■■□□□ 1.44
HMGXB4-203ENST00000420166 ADGRF4Q8IZF3 695 aa24.04■■□□□ 1.44
HMGXB4-203ENST00000420166 TNS4Q8IZW8 715 aa24.04■■□□□ 1.44
HMGXB4-203ENST00000420166 BRF1Q92994 677 aa24.04■■□□□ 1.44
HMGXB4-203ENST00000420166 AGBL1Q96MI9 1066 aa24.04■■□□□ 1.44
HMGXB4-203ENST00000420166 NUDT12Q9BQG2 462 aa24.04■■□□□ 1.44
HMGXB4-203ENST00000420166 AGXT2Q9BYV1 514 aa24.04■■□□□ 1.44
HMGXB4-203ENST00000420166 BRPF3Q9ULD4 1205 aa24.04■■□□□ 1.44
HMGXB4-203ENST00000420166 ICAM1P05362 532 aa24.03■■□□□ 1.44
HMGXB4-203ENST00000420166 SLC4A3P48751 1232 aa24.03■■□□□ 1.44
HMGXB4-203ENST00000420166 IRF5Q13568 498 aa24.03■■□□□ 1.44
HMGXB4-203ENST00000420166 GRB14Q14449 540 aa24.03■■□□□ 1.44
HMGXB4-203ENST00000420166 MICU3Q86XE3 530 aa24.03■■□□□ 1.44
HMGXB4-203ENST00000420166 RAB11FIP4Q86YS3 637 aa24.03■■□□□ 1.44
HMGXB4-203ENST00000420166 RAET1EQ8TD07 263 aa24.03■■□□□ 1.44
HMGXB4-203ENST00000420166 USP6NLQ92738 828 aa24.03■■□□□ 1.44
HMGXB4-203ENST00000420166 HTTP42858 3142 aa24.03■■□□□ 1.44
HMGXB4-203ENST00000420166 KLF18A0A0U1RQI7 1052 aa24.02■■□□□ 1.44
HMGXB4-203ENST00000420166 STRNO43815 780 aa24.02■■□□□ 1.44
HMGXB4-203ENST00000420166 DHX16O60231 1041 aaKnown RBP24.02■■□□□ 1.44
HMGXB4-203ENST00000420166 RXRAP19793 462 aa24.02■■□□□ 1.44
HMGXB4-203ENST00000420166 CDC37Q16543 378 aaPredicted RBP24.02■■□□□ 1.44
HMGXB4-203ENST00000420166 SLC35G1Q2M3R5 365 aa24.02■■□□□ 1.44
HMGXB4-203ENST00000420166 TKFCQ3LXA3 575 aa24.02■■□□□ 1.44
HMGXB4-203ENST00000420166 ABRAQ8N0Z2 381 aa24.02■■□□□ 1.44
HMGXB4-203ENST00000420166 JMJD4Q9H9V9 463 aa24.02■■□□□ 1.44
HMGXB4-203ENST00000420166 CCPG1Q9ULG6 757 aa24.02■■□□□ 1.44
HMGXB4-203ENST00000420166 ZBTB43O43298 467 aa24.01■■□□□ 1.43
HMGXB4-203ENST00000420166 FCER1AP12319 257 aa24.01■■□□□ 1.43
HMGXB4-203ENST00000420166 APOBRQ0VD83 1088 aa24.01■■□□□ 1.43
HMGXB4-203ENST00000420166 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.01■■□□□ 1.43
HMGXB4-203ENST00000420166 CCDC144CPQ8IYA2 1237 aa24.01■■□□□ 1.43
HMGXB4-203ENST00000420166 FANCBQ8NB91 859 aa24.01■■□□□ 1.43
HMGXB4-203ENST00000420166 CHST13Q8NET6 341 aa24.01■■□□□ 1.43
HMGXB4-203ENST00000420166 VAT1LQ9HCJ6 419 aa24.01■■□□□ 1.43
HMGXB4-203ENST00000420166 HOMER2Q9NSB8 354 aa24.01■■□□□ 1.43
HMGXB4-203ENST00000420166 PNMA2Q9UL42 364 aa24.01■■□□□ 1.43
HMGXB4-203ENST00000420166 HPS5Q9UPZ3 1129 aa24.01■■□□□ 1.43
HMGXB4-203ENST00000420166 ALAS1P13196 640 aa24■■□□□ 1.43
HMGXB4-203ENST00000420166 ADORA2AP29274 412 aa24■■□□□ 1.43
HMGXB4-203ENST00000420166 RGS2P41220 211 aa24■■□□□ 1.43
HMGXB4-203ENST00000420166 GNAQP50148 359 aa24■■□□□ 1.43
HMGXB4-203ENST00000420166 RCAN1P53805 252 aa24■■□□□ 1.43
HMGXB4-203ENST00000420166 MAP2K5Q13163 448 aa24■■□□□ 1.43
HMGXB4-203ENST00000420166 TOB2Q14106 344 aaPredicted RBP24■■□□□ 1.43
HMGXB4-203ENST00000420166 NBPF11Q86T75 865 aa24■■□□□ 1.43
HMGXB4-203ENST00000420166 MTMR8Q96EF0 704 aa24■■□□□ 1.43
HMGXB4-203ENST00000420166 MMP19Q99542 508 aa24■■□□□ 1.43
HMGXB4-203ENST00000420166 RIOX1Q9H6W3 641 aa24■■□□□ 1.43
HMGXB4-203ENST00000420166 RNF146Q9NTX7 359 aa24■■□□□ 1.43
HMGXB4-203ENST00000420166 PDRG1Q9NUG6 133 aa24■■□□□ 1.43
HMGXB4-203ENST00000420166 FBXO40Q9UH90 709 aa24■■□□□ 1.43
HMGXB4-203ENST00000420166 PLXNA1Q9UIW2 1896 aa23.99■■□□□ 1.43
HMGXB4-203ENST00000420166 CYTH3O43739 400 aa23.99■■□□□ 1.43
HMGXB4-203ENST00000420166 TAL1P17542 331 aaPredicted RBP23.99■■□□□ 1.43
HMGXB4-203ENST00000420166 CYP2B6P20813 491 aa23.99■■□□□ 1.43
HMGXB4-203ENST00000420166 QRICH1Q2TAL8 776 aa23.99■■□□□ 1.43
HMGXB4-203ENST00000420166 APBA2Q99767 749 aa23.99■■□□□ 1.43
HMGXB4-203ENST00000420166 LZTS2Q9BRK4 669 aa23.99■■□□□ 1.43
HMGXB4-203ENST00000420166 SPZ1Q9BXG8 430 aa23.99■■□□□ 1.43
HMGXB4-203ENST00000420166 ACAD9Q9H845 621 aa23.99■■□□□ 1.43
HMGXB4-203ENST00000420166 GOLGA8AA7E2F4 631 aa23.98■■□□□ 1.43
HMGXB4-203ENST00000420166 GOLGA8BA8MQT2 603 aa23.98■■□□□ 1.43
HMGXB4-203ENST00000420166 ADCY3O60266 1144 aa23.98■■□□□ 1.43
HMGXB4-203ENST00000420166 PLEKHA8P1O95397 391 aa23.98■■□□□ 1.43
HMGXB4-203ENST00000420166 XRCC5P13010 732 aaKnown RBP23.98■■□□□ 1.43
HMGXB4-203ENST00000420166 KCTD2Q14681 263 aa23.98■■□□□ 1.43
HMGXB4-203ENST00000420166 RTN1Q16799 776 aa23.98■■□□□ 1.43
HMGXB4-203ENST00000420166 SLC9C1Q4G0N8 1177 aa23.98■■□□□ 1.43
HMGXB4-203ENST00000420166 SLAIN1Q8ND83 568 aa23.98■■□□□ 1.43
HMGXB4-203ENST00000420166 PXYLP1Q8TE99 480 aa23.98■■□□□ 1.43
HMGXB4-203ENST00000420166 TRERF1Q96PN7 1200 aa23.98■■□□□ 1.43
HMGXB4-203ENST00000420166 C22orf23Q9BZE7 217 aa23.98■■□□□ 1.43
HMGXB4-203ENST00000420166 NAP1L2Q9ULW6 460 aaPredicted RBP23.98■■□□□ 1.43
HMGXB4-203ENST00000420166 HOXC6P09630 235 aa23.97■■□□□ 1.43
HMGXB4-203ENST00000420166 SMARCA1P28370 1054 aa23.97■■□□□ 1.43
HMGXB4-203ENST00000420166 GRK4P32298 578 aa23.97■■□□□ 1.43
HMGXB4-203ENST00000420166 EVCP57679 992 aa23.97■■□□□ 1.43
HMGXB4-203ENST00000420166 TMTC3Q6ZXV5 915 aa23.97■■□□□ 1.43
HMGXB4-203ENST00000420166 UPF2Q9HAU5 1272 aaKnown RBP23.97■■□□□ 1.43
HMGXB4-203ENST00000420166 RBM28Q9NW13 759 aaKnown RBP23.97■■□□□ 1.43
HMGXB4-203ENST00000420166 NID2Q14112 1375 aa23.96■■□□□ 1.43
HMGXB4-203ENST00000420166 ZBTB5O15062 677 aa23.96■■□□□ 1.43
HMGXB4-203ENST00000420166 COBLO75128 1261 aa23.96■■□□□ 1.43
HMGXB4-203ENST00000420166 ELNP15502 786 aa23.96■■□□□ 1.43
HMGXB4-203ENST00000420166 RBM25P49756 843 aaKnown RBP23.96■■□□□ 1.43
HMGXB4-203ENST00000420166 MUM1L1Q5H9M0 696 aa23.96■■□□□ 1.43
HMGXB4-203ENST00000420166 DPP9Q86TI2 863 aa23.96■■□□□ 1.43
HMGXB4-203ENST00000420166 FBXO11Q86XK2 927 aa23.96■■□□□ 1.43
HMGXB4-203ENST00000420166 SRBD1Q8N5C6 995 aaKnown RBP23.96■■□□□ 1.43
HMGXB4-203ENST00000420166 ABHD8Q96I13 439 aa23.96■■□□□ 1.43
HMGXB4-203ENST00000420166 METAP2P50579 478 aaKnown RBP eCLIP23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms