RNA–Protein interactions for RNA: ENST00000419493.2

CTSA-205, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-205ENST00000419493 ACAD9Q9H845 621 aa11.34□□□□□ -0.59
CTSA-205ENST00000419493 RNF146Q9NTX7 359 aa11.34□□□□□ -0.59
CTSA-205ENST00000419493 CCPG1Q9ULG6 757 aa11.34□□□□□ -0.59
CTSA-205ENST00000419493 CNPY2Q9Y2B0 182 aa11.34□□□□□ -0.59
CTSA-205ENST00000419493 NR2E3Q9Y5X4 410 aa11.34□□□□□ -0.59
CTSA-205ENST00000419493 CENPFP49454 3210 aa11.34□□□□□ -0.59
CTSA-205ENST00000419493 HTTP42858 3142 aa11.34□□□□□ -0.59
CTSA-205ENST00000419493 TNKSO95271 1327 aa11.34□□□□□ -0.59
CTSA-205ENST00000419493 ERICH2A1L162 156 aa11.33□□□□□ -0.6
CTSA-205ENST00000419493 H0YGN5 161 aa11.33□□□□□ -0.6
CTSA-205ENST00000419493 SEPT4O43236 478 aa11.33□□□□□ -0.6
CTSA-205ENST00000419493 DHX16O60231 1041 aaKnown RBP11.33□□□□□ -0.6
CTSA-205ENST00000419493 GOLGA8HP0CJ92 632 aa11.33□□□□□ -0.6
CTSA-205ENST00000419493 TKFCQ3LXA3 575 aa11.33□□□□□ -0.6
CTSA-205ENST00000419493 IFIT1BQ5T764 474 aaKnown RBP11.33□□□□□ -0.6
CTSA-205ENST00000419493 RALYLQ86SE5 291 aaKnown RBP11.33□□□□□ -0.6
CTSA-205ENST00000419493 ARRDC4Q8NCT1 418 aa11.33□□□□□ -0.6
CTSA-205ENST00000419493 TRPV1Q8NER1 839 aa11.33□□□□□ -0.6
CTSA-205ENST00000419493 ZNF536O15090 1300 aa11.33□□□□□ -0.6
CTSA-205ENST00000419493 POTEB2H3BUK9 544 aa11.32□□□□□ -0.6
CTSA-205ENST00000419493 ICAM1P05362 532 aa11.32□□□□□ -0.6
CTSA-205ENST00000419493 CYP21A2P08686 494 aa11.32□□□□□ -0.6
CTSA-205ENST00000419493 ZNF543Q08ER8 600 aa11.32□□□□□ -0.6
CTSA-205ENST00000419493 GPATCH4Q5T3I0 446 aaKnown RBP11.32□□□□□ -0.6
CTSA-205ENST00000419493 CASC1Q6TDU7 716 aa11.32□□□□□ -0.6
CTSA-205ENST00000419493 BTNL9Q6UXG8 535 aa11.32□□□□□ -0.6
CTSA-205ENST00000419493 NSMFQ6X4W1 530 aa11.32□□□□□ -0.6
CTSA-205ENST00000419493 ENAHQ8N8S7 591 aaPredicted RBP11.32□□□□□ -0.6
CTSA-205ENST00000419493 NCOA7Q8NI08 942 aa11.32□□□□□ -0.6
CTSA-205ENST00000419493 SENP6Q9GZR1 1112 aaPredicted RBP11.32□□□□□ -0.6
CTSA-205ENST00000419493 UBA5Q9GZZ9 404 aa11.32□□□□□ -0.6
CTSA-205ENST00000419493 PDE4DIPQ5VU43 2346 aa11.32□□□□□ -0.6
CTSA-205ENST00000419493 ZNF236Q9UL36 1845 aa11.31□□□□□ -0.6
CTSA-205ENST00000419493 DNAJC25-GNG10A0A024R161 153 aa11.31□□□□□ -0.6
CTSA-205ENST00000419493 KBTBD13C9JR72 458 aa11.31□□□□□ -0.6
CTSA-205ENST00000419493 E7EWF7 191 aa11.31□□□□□ -0.6
CTSA-205ENST00000419493 IFIT3O14879 490 aaKnown RBP11.31□□□□□ -0.6
CTSA-205ENST00000419493 IGHA2P01877 340 aa11.31□□□□□ -0.6
CTSA-205ENST00000419493 PARP1P09874 1014 aaKnown RBP11.31□□□□□ -0.6
CTSA-205ENST00000419493 RARBP10826 455 aa11.31□□□□□ -0.6
CTSA-205ENST00000419493 TAL1P17542 331 aaPredicted RBP11.31□□□□□ -0.6
CTSA-205ENST00000419493 MNX1P50219 401 aaPredicted RBP11.31□□□□□ -0.6
CTSA-205ENST00000419493 SART3Q15020 963 aaKnown RBP11.31□□□□□ -0.6
CTSA-205ENST00000419493 BMP2KLQ5H9B9 411 aa11.31□□□□□ -0.6
CTSA-205ENST00000419493 MUM1L1Q5H9M0 696 aa11.31□□□□□ -0.6
CTSA-205ENST00000419493 GJC2Q5T442 439 aaPredicted RBP11.31□□□□□ -0.6
CTSA-205ENST00000419493 CYB5R4Q7L1T6 521 aa11.31□□□□□ -0.6
CTSA-205ENST00000419493 CHST3Q7LGC8 479 aa11.31□□□□□ -0.6
CTSA-205ENST00000419493 C7orf61Q8IZ16 206 aa11.31□□□□□ -0.6
CTSA-205ENST00000419493 MSL3Q8N5Y2 521 aaKnown RBP11.31□□□□□ -0.6
CTSA-205ENST00000419493 MAP4K1Q92918 833 aa11.31□□□□□ -0.6
CTSA-205ENST00000419493 ESYT1Q9BSJ8 1104 aa11.31□□□□□ -0.6
CTSA-205ENST00000419493 RANBP17Q9H2T7 1088 aaKnown RBP11.31□□□□□ -0.6
CTSA-205ENST00000419493 VAT1LQ9HCJ6 419 aa11.31□□□□□ -0.6
CTSA-205ENST00000419493 ANO2Q9NQ90 1003 aa11.31□□□□□ -0.6
CTSA-205ENST00000419493 A1CFQ9NQ94 594 aaKnown RBP11.31□□□□□ -0.6
CTSA-205ENST00000419493 NRBP1Q9UHY1 535 aa11.31□□□□□ -0.6
CTSA-205ENST00000419493 ZHX1Q9UKY1 873 aaPredicted RBP11.31□□□□□ -0.6
CTSA-205ENST00000419493 RBM8AQ9Y5S9 174 aaKnown RBP11.31□□□□□ -0.6
CTSA-205ENST00000419493 PFASO15067 1338 aa11.31□□□□□ -0.6
CTSA-205ENST00000419493 PTPDC1A2A3K4 754 aa11.3□□□□□ -0.6
CTSA-205ENST00000419493 DNM1LO00429 736 aa11.3□□□□□ -0.6
CTSA-205ENST00000419493 SNAI1O95863 264 aaPredicted RBP11.3□□□□□ -0.6
CTSA-205ENST00000419493 SNHG28P0DPA3 235 aa11.3□□□□□ -0.6
CTSA-205ENST00000419493 AKR1A1P14550 325 aa11.3□□□□□ -0.6
CTSA-205ENST00000419493 CNTN2Q02246 1040 aa11.3□□□□□ -0.6
CTSA-205ENST00000419493 USH1GQ495M9 461 aa11.3□□□□□ -0.6
CTSA-205ENST00000419493 ASPRV1Q53RT3 343 aa11.3□□□□□ -0.6
CTSA-205ENST00000419493 MAMDC4Q6UXC1 1216 aa11.3□□□□□ -0.6
CTSA-205ENST00000419493 ZNF467Q7Z7K2 595 aaPredicted RBP11.3□□□□□ -0.6
CTSA-205ENST00000419493 ANKS1AQ92625 1134 aa11.3□□□□□ -0.6
CTSA-205ENST00000419493 CPVLQ9H3G5 476 aa11.3□□□□□ -0.6
CTSA-205ENST00000419493 XPNPEP3Q9NQH7 507 aa11.3□□□□□ -0.6
CTSA-205ENST00000419493 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.3□□□□□ -0.6
CTSA-205ENST00000419493 PNMA2Q9UL42 364 aa11.3□□□□□ -0.6
CTSA-205ENST00000419493 FAM184BQ9ULE4 1060 aa11.3□□□□□ -0.6
CTSA-205ENST00000419493 SYNGAP1Q96PV0 1343 aa11.3□□□□□ -0.6
CTSA-205ENST00000419493 LAMA4Q16363 1823 aa11.3□□□□□ -0.6
CTSA-205ENST00000419493 PLXNA1Q9UIW2 1896 aa11.29□□□□□ -0.6
CTSA-205ENST00000419493 ASB14A6NK59 587 aa11.29□□□□□ -0.6
CTSA-205ENST00000419493 PGK1P00558 417 aa11.29□□□□□ -0.6
CTSA-205ENST00000419493 ZNF865P0CJ78 1059 aaPredicted RBP11.29□□□□□ -0.6
CTSA-205ENST00000419493 ATN1P54259 1190 aaPredicted RBP11.29□□□□□ -0.6
CTSA-205ENST00000419493 ACVR2BQ13705 512 aa11.29□□□□□ -0.6
CTSA-205ENST00000419493 WTAPQ15007 396 aa11.29□□□□□ -0.6
CTSA-205ENST00000419493 NOL8Q76FK4 1167 aaKnown RBP11.29□□□□□ -0.6
CTSA-205ENST00000419493 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.29□□□□□ -0.6
CTSA-205ENST00000419493 ARMCX2Q7L311 632 aa11.29□□□□□ -0.6
CTSA-205ENST00000419493 RNF180Q86T96 592 aa11.29□□□□□ -0.6
CTSA-205ENST00000419493 CCDC144CPQ8IYA2 1237 aa11.29□□□□□ -0.6
CTSA-205ENST00000419493 ADGRF4Q8IZF3 695 aa11.29□□□□□ -0.6
CTSA-205ENST00000419493 ABHD16BQ9H3Z7 469 aa11.29□□□□□ -0.6
CTSA-205ENST00000419493 SOWAHBA6NEL2 793 aa11.28□□□□□ -0.6
CTSA-205ENST00000419493 NFIBO00712 420 aa11.28□□□□□ -0.6
CTSA-205ENST00000419493 COL6A1P12109 1028 aa11.28□□□□□ -0.6
CTSA-205ENST00000419493 SYN1P17600 705 aa11.28□□□□□ -0.6
CTSA-205ENST00000419493 CALML3P27482 149 aa11.28□□□□□ -0.6
CTSA-205ENST00000419493 BAATQ14032 418 aaPredicted RBP11.28□□□□□ -0.6
CTSA-205ENST00000419493 LRRC41Q15345 812 aa11.28□□□□□ -0.6
CTSA-205ENST00000419493 SEC23AQ15436 765 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms