RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 E7EWF7 191 aa24.23■■□□□ 1.47
PKNOX1-202ENST00000418336 CCDC96Q2M329 555 aa24.23■■□□□ 1.47
PKNOX1-202ENST00000418336 SYDE2Q5VT97 1194 aa24.23■■□□□ 1.47
PKNOX1-202ENST00000418336 IQCA1Q86XH1 822 aa24.23■■□□□ 1.47
PKNOX1-202ENST00000418336 ANKLE1Q8NAG6 615 aa24.23■■□□□ 1.47
PKNOX1-202ENST00000418336 PNMA1Q8ND90 353 aa24.23■■□□□ 1.47
PKNOX1-202ENST00000418336 ANTXR2P58335 489 aa24.22■■□□□ 1.47
PKNOX1-202ENST00000418336 CCDC178Q5BJE1 867 aa24.22■■□□□ 1.47
PKNOX1-202ENST00000418336 PRAMEF19Q5SWL8 479 aa24.22■■□□□ 1.47
PKNOX1-202ENST00000418336 SENP2Q9HC62 589 aa24.22■■□□□ 1.47
PKNOX1-202ENST00000418336 GPCPD1Q9NPB8 672 aa24.22■■□□□ 1.47
PKNOX1-202ENST00000418336 ASTN1O14525 1302 aa24.21■■□□□ 1.47
PKNOX1-202ENST00000418336 GOLGA8HP0CJ92 632 aa24.21■■□□□ 1.47
PKNOX1-202ENST00000418336 NECTIN1Q15223 517 aa24.21■■□□□ 1.47
PKNOX1-202ENST00000418336 MUM1L1Q5H9M0 696 aa24.21■■□□□ 1.47
PKNOX1-202ENST00000418336 CCDC174Q6PII3 467 aa24.21■■□□□ 1.47
PKNOX1-202ENST00000418336 MB21D2Q8IYB1 491 aaPredicted RBP24.21■■□□□ 1.47
PKNOX1-202ENST00000418336 TINF2Q9BSI4 451 aa24.21■■□□□ 1.47
PKNOX1-202ENST00000418336 A1CFQ9NQ94 594 aaKnown RBP24.21■■□□□ 1.47
PKNOX1-202ENST00000418336 SLC5A4Q9NY91 659 aa24.21■■□□□ 1.47
PKNOX1-202ENST00000418336 DDX20Q9UHI6 824 aaKnown RBP24.21■■□□□ 1.47
PKNOX1-202ENST00000418336 ICAM1P05362 532 aa24.2■■□□□ 1.46
PKNOX1-202ENST00000418336 COL6A1P12109 1028 aa24.2■■□□□ 1.46
PKNOX1-202ENST00000418336 IKQ13123 557 aaPredicted RBP24.2■■□□□ 1.46
PKNOX1-202ENST00000418336 TKFCQ3LXA3 575 aa24.2■■□□□ 1.46
PKNOX1-202ENST00000418336 PRPF38BQ5VTL8 546 aaKnown RBP24.2■■□□□ 1.46
PKNOX1-202ENST00000418336 MAMDC4Q6UXC1 1216 aa24.2■■□□□ 1.46
PKNOX1-202ENST00000418336 PAWRQ96IZ0 340 aaKnown RBP24.2■■□□□ 1.46
PKNOX1-202ENST00000418336 CPVLQ9H3G5 476 aa24.2■■□□□ 1.46
PKNOX1-202ENST00000418336 RNF146Q9NTX7 359 aa24.2■■□□□ 1.46
PKNOX1-202ENST00000418336 FBXO40Q9UH90 709 aa24.2■■□□□ 1.46
PKNOX1-202ENST00000418336 ISY1Q9ULR0 285 aaKnown RBP24.2■■□□□ 1.46
PKNOX1-202ENST00000418336 PFASO15067 1338 aa24.19■■□□□ 1.46
PKNOX1-202ENST00000418336 ZNF865P0CJ78 1059 aaPredicted RBP24.19■■□□□ 1.46
PKNOX1-202ENST00000418336 ZNF467Q7Z7K2 595 aaPredicted RBP24.19■■□□□ 1.46
PKNOX1-202ENST00000418336 FAM133AQ8N9E0 248 aa24.19■■□□□ 1.46
PKNOX1-202ENST00000418336 ACAD9Q9H845 621 aa24.19■■□□□ 1.46
PKNOX1-202ENST00000418336 HOMER2Q9NSB8 354 aa24.19■■□□□ 1.46
PKNOX1-202ENST00000418336 SNAI1O95863 264 aaPredicted RBP24.18■■□□□ 1.46
PKNOX1-202ENST00000418336 SLC4A3P48751 1232 aa24.18■■□□□ 1.46
PKNOX1-202ENST00000418336 SLC35G1Q2M3R5 365 aa24.18■■□□□ 1.46
PKNOX1-202ENST00000418336 GPATCH4Q5T3I0 446 aaKnown RBP24.18■■□□□ 1.46
PKNOX1-202ENST00000418336 TRERF1Q96PN7 1200 aa24.18■■□□□ 1.46
PKNOX1-202ENST00000418336 KATNBL1Q9H079 304 aa24.18■■□□□ 1.46
PKNOX1-202ENST00000418336 KAT14Q9H8E8 782 aa24.18■■□□□ 1.46
PKNOX1-202ENST00000418336 NRBP1Q9UHY1 535 aa24.18■■□□□ 1.46
PKNOX1-202ENST00000418336 LRRC37A2A6NM11 1700 aa24.18■■□□□ 1.46
PKNOX1-202ENST00000418336 MCM3APO60318 1980 aa24.17■■□□□ 1.46
PKNOX1-202ENST00000418336 SLC27A2O14975 620 aa24.17■■□□□ 1.46
PKNOX1-202ENST00000418336 SEPT4O43236 478 aa24.17■■□□□ 1.46
PKNOX1-202ENST00000418336 CNTN2Q02246 1040 aa24.17■■□□□ 1.46
PKNOX1-202ENST00000418336 MSL3Q8N5Y2 521 aaKnown RBP24.17■■□□□ 1.46
PKNOX1-202ENST00000418336 IGDCC4Q8TDY8 1250 aa24.17■■□□□ 1.46
PKNOX1-202ENST00000418336 CLEC4DQ8WXI8 215 aa24.17■■□□□ 1.46
PKNOX1-202ENST00000418336 UBA5Q9GZZ9 404 aa24.17■■□□□ 1.46
PKNOX1-202ENST00000418336 CTDP1Q9Y5B0 961 aaPredicted RBP24.17■■□□□ 1.46
PKNOX1-202ENST00000418336 SYNGAP1Q96PV0 1343 aa24.16■■□□□ 1.46
PKNOX1-202ENST00000418336 SOWAHBA6NEL2 793 aa24.16■■□□□ 1.46
PKNOX1-202ENST00000418336 ALAS1P13196 640 aa24.16■■□□□ 1.46
PKNOX1-202ENST00000418336 CHST3Q7LGC8 479 aa24.16■■□□□ 1.46
PKNOX1-202ENST00000418336 ANKRD35Q8N283 1001 aa24.16■■□□□ 1.46
PKNOX1-202ENST00000418336 STAG2Q8N3U4 1231 aa24.16■■□□□ 1.46
PKNOX1-202ENST00000418336 NCOA7Q8NI08 942 aa24.16■■□□□ 1.46
PKNOX1-202ENST00000418336 UBAC1Q9BSL1 405 aa24.16■■□□□ 1.46
PKNOX1-202ENST00000418336 CYP39A1Q9NYL5 469 aa24.16■■□□□ 1.46
PKNOX1-202ENST00000418336 CCPG1Q9ULG6 757 aa24.16■■□□□ 1.46
PKNOX1-202ENST00000418336 WDR19Q8NEZ3 1342 aa24.15■■□□□ 1.46
PKNOX1-202ENST00000418336 CDC45O75419 566 aa24.15■■□□□ 1.46
PKNOX1-202ENST00000418336 IFIT1BQ5T764 474 aaKnown RBP24.15■■□□□ 1.46
PKNOX1-202ENST00000418336 CREB3L3Q68CJ9 461 aa24.15■■□□□ 1.46
PKNOX1-202ENST00000418336 DDX11Q96FC9 970 aa24.15■■□□□ 1.46
PKNOX1-202ENST00000418336 MAD2L2Q9UI95 211 aa24.15■■□□□ 1.46
PKNOX1-202ENST00000418336 NFIBO00712 420 aa24.14■■□□□ 1.45
PKNOX1-202ENST00000418336 MSCO60682 206 aa24.14■■□□□ 1.45
PKNOX1-202ENST00000418336 ASPRV1Q53RT3 343 aa24.14■■□□□ 1.45
PKNOX1-202ENST00000418336 NECAB2Q7Z6G3 386 aa24.14■■□□□ 1.45
PKNOX1-202ENST00000418336 GPHNQ9NQX3 736 aaPredicted RBP24.14■■□□□ 1.45
PKNOX1-202ENST00000418336 DNAH12Q6ZR08 3092 aa24.14■■□□□ 1.45
PKNOX1-202ENST00000418336 CEP290O15078 2479 aa24.13■■□□□ 1.45
PKNOX1-202ENST00000418336 PALM3A6NDB9 673 aaPredicted RBP24.13■■□□□ 1.45
PKNOX1-202ENST00000418336 ADCY6O43306 1168 aa24.13■■□□□ 1.45
PKNOX1-202ENST00000418336 CNGA1P29973 690 aa24.13■■□□□ 1.45
PKNOX1-202ENST00000418336 TROAPQ12815 778 aa24.13■■□□□ 1.45
PKNOX1-202ENST00000418336 TRDNQ13061 729 aa24.13■■□□□ 1.45
PKNOX1-202ENST00000418336 ADGRF4Q8IZF3 695 aa24.13■■□□□ 1.45
PKNOX1-202ENST00000418336 MTMR8Q96EF0 704 aa24.13■■□□□ 1.45
PKNOX1-202ENST00000418336 PURBQ96QR8 312 aaKnown RBP24.13■■□□□ 1.45
PKNOX1-202ENST00000418336 ANO2Q9NQ90 1003 aa24.13■■□□□ 1.45
PKNOX1-202ENST00000418336 RANBP2P49792 3224 aaKnown RBP24.13■■□□□ 1.45
PKNOX1-202ENST00000418336 ANO1Q5XXA6 986 aa24.12■■□□□ 1.45
PKNOX1-202ENST00000418336 KIAA1211Q6ZU35 1233 aa24.12■■□□□ 1.45
PKNOX1-202ENST00000418336 C11orf49Q9H6J7 331 aa24.12■■□□□ 1.45
PKNOX1-202ENST00000418336 JMJD4Q9H9V9 463 aa24.12■■□□□ 1.45
PKNOX1-202ENST00000418336 LY9Q9HBG7 655 aa24.12■■□□□ 1.45
PKNOX1-202ENST00000418336 DDX49Q9Y6V7 483 aaKnown RBP24.12■■□□□ 1.45
PKNOX1-202ENST00000418336 IFIT3O14879 490 aaKnown RBP24.11■■□□□ 1.45
PKNOX1-202ENST00000418336 GRM4Q14833 912 aa24.11■■□□□ 1.45
PKNOX1-202ENST00000418336 CDC37Q16543 378 aaPredicted RBP24.11■■□□□ 1.45
PKNOX1-202ENST00000418336 ERICH6BQ5W0A0 696 aa24.11■■□□□ 1.45
PKNOX1-202ENST00000418336 ARMCX2Q7L311 632 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms