RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.12■□□□□ 0.33
PAF1-202ENST00000416728 ZNFX1Q9P2E3 1918 aaKnown RBP17.12■□□□□ 0.33
PAF1-202ENST00000416728 COL6A3P12111 3177 aa17.11■□□□□ 0.33
PAF1-202ENST00000416728 KIAA0355O15063 1070 aa17.11■□□□□ 0.33
PAF1-202ENST00000416728 FOXP2O15409 715 aa17.11■□□□□ 0.33
PAF1-202ENST00000416728 C6orf222P0C671 652 aaPredicted RBP17.11■□□□□ 0.33
PAF1-202ENST00000416728 RAG1P15918 1043 aa17.11■□□□□ 0.33
PAF1-202ENST00000416728 MCCP23508 829 aa17.11■□□□□ 0.33
PAF1-202ENST00000416728 KCNA10Q16322 511 aa17.11■□□□□ 0.33
PAF1-202ENST00000416728 ARMCX2Q7L311 632 aa17.11■□□□□ 0.33
PAF1-202ENST00000416728 CHMP4CQ96CF2 233 aa17.11■□□□□ 0.33
PAF1-202ENST00000416728 EVI5LQ96CN4 794 aa17.11■□□□□ 0.33
PAF1-202ENST00000416728 FGD4Q96M96 766 aa17.11■□□□□ 0.33
PAF1-202ENST00000416728 TMEM39AQ9NV64 488 aa17.11■□□□□ 0.33
PAF1-202ENST00000416728 PLXNA1Q9UIW2 1896 aa17.11■□□□□ 0.33
PAF1-202ENST00000416728 MYADML2A6NDP7 307 aa17.1■□□□□ 0.33
PAF1-202ENST00000416728 DCDC2CA8MYV0 355 aa17.1■□□□□ 0.33
PAF1-202ENST00000416728 ITGB8P26012 769 aa17.1■□□□□ 0.33
PAF1-202ENST00000416728 CST5P28325 142 aaPredicted RBP17.1■□□□□ 0.33
PAF1-202ENST00000416728 CTDSPL2Q05D32 466 aa17.1■□□□□ 0.33
PAF1-202ENST00000416728 CCDC144BQ3MJ40 725 aa17.1■□□□□ 0.33
PAF1-202ENST00000416728 CCSAPQ6IQ19 270 aaPredicted RBP17.1■□□□□ 0.33
PAF1-202ENST00000416728 ANKRD33Q7Z3H0 272 aa17.1■□□□□ 0.33
PAF1-202ENST00000416728 CCDC144CPQ8IYA2 1237 aa17.1■□□□□ 0.33
PAF1-202ENST00000416728 GLT1D1Q96MS3 346 aa17.1■□□□□ 0.33
PAF1-202ENST00000416728 TOX2Q96NM4 488 aa17.1■□□□□ 0.33
PAF1-202ENST00000416728 GUCD1Q96NT3 240 aa17.1■□□□□ 0.33
PAF1-202ENST00000416728 RNF146Q9NTX7 359 aa17.1■□□□□ 0.33
PAF1-202ENST00000416728 SMCHD1A6NHR9 2005 aa17.09■□□□□ 0.33
PAF1-202ENST00000416728 MYH4Q9Y623 1939 aa17.09■□□□□ 0.33
PAF1-202ENST00000416728 RANBP6O60518 1105 aaKnown RBP17.09■□□□□ 0.33
PAF1-202ENST00000416728 PLA2G6O60733 806 aa17.09■□□□□ 0.33
PAF1-202ENST00000416728 CNTN2Q02246 1040 aa17.09■□□□□ 0.33
PAF1-202ENST00000416728 TKFCQ3LXA3 575 aa17.09■□□□□ 0.33
PAF1-202ENST00000416728 VPS53Q5VIR6 699 aa17.09■□□□□ 0.33
PAF1-202ENST00000416728 KCTD1Q719H9 257 aa17.09■□□□□ 0.33
PAF1-202ENST00000416728 PCSK9Q8NBP7 692 aaKnown RBP17.09■□□□□ 0.33
PAF1-202ENST00000416728 AGBL1Q96MI9 1066 aa17.09■□□□□ 0.33
PAF1-202ENST00000416728 CRBNQ96SW2 442 aa17.09■□□□□ 0.33
PAF1-202ENST00000416728 A1CFQ9NQ94 594 aaKnown RBP17.09■□□□□ 0.33
PAF1-202ENST00000416728 INCENPQ9NQS7 918 aa17.09■□□□□ 0.33
PAF1-202ENST00000416728 IL17RBQ9NRM6 502 aa17.09■□□□□ 0.33
PAF1-202ENST00000416728 ZNF536O15090 1300 aa17.09■□□□□ 0.33
PAF1-202ENST00000416728 ADCY6O43306 1168 aa17.08■□□□□ 0.32
PAF1-202ENST00000416728 NMT2O60551 498 aa17.08■□□□□ 0.32
PAF1-202ENST00000416728 PDE1AP54750 535 aa17.08■□□□□ 0.32
PAF1-202ENST00000416728 SMAD3P84022 425 aaKnown RBP17.08■□□□□ 0.32
PAF1-202ENST00000416728 FPGSQ05932 587 aa17.08■□□□□ 0.32
PAF1-202ENST00000416728 FAAP100Q0VG06 881 aa17.08■□□□□ 0.32
PAF1-202ENST00000416728 RCSD1Q6JBY9 416 aa17.08■□□□□ 0.32
PAF1-202ENST00000416728 FAM133AQ8N9E0 248 aa17.08■□□□□ 0.32
PAF1-202ENST00000416728 RNPC3Q96LT9 517 aaKnown RBP17.08■□□□□ 0.32
PAF1-202ENST00000416728 UPF3AQ9H1J1 476 aaKnown RBP17.08■□□□□ 0.32
PAF1-202ENST00000416728 HELLSQ9NRZ9 838 aa17.08■□□□□ 0.32
PAF1-202ENST00000416728 ANAPC4Q9UJX5 808 aa17.08■□□□□ 0.32
PAF1-202ENST00000416728 ELP1O95163 1332 aa17.08■□□□□ 0.32
PAF1-202ENST00000416728 ASGR1P07306 291 aa17.07■□□□□ 0.32
PAF1-202ENST00000416728 ALAS1P13196 640 aa17.07■□□□□ 0.32
PAF1-202ENST00000416728 GJA9P57773 515 aa17.07■□□□□ 0.32
PAF1-202ENST00000416728 IRX5P78411 483 aaPredicted RBP17.07■□□□□ 0.32
PAF1-202ENST00000416728 GNASQ5JWF2 1037 aa17.07■□□□□ 0.32
PAF1-202ENST00000416728 CCDC174Q6PII3 467 aa17.07■□□□□ 0.32
PAF1-202ENST00000416728 VTI1AQ96AJ9 217 aa17.07■□□□□ 0.32
PAF1-202ENST00000416728 TRERF1Q96PN7 1200 aa17.07■□□□□ 0.32
PAF1-202ENST00000416728 KATNBL1Q9H079 304 aa17.07■□□□□ 0.32
PAF1-202ENST00000416728 TOMM22Q9NS69 142 aa17.07■□□□□ 0.32
PAF1-202ENST00000416728 PRR12Q9ULL5 1215 aa17.07■□□□□ 0.32
PAF1-202ENST00000416728 MTMR7Q9Y216 660 aa17.07■□□□□ 0.32
PAF1-202ENST00000416728 MROH7Q68CQ1 1323 aa17.07■□□□□ 0.32
PAF1-202ENST00000416728 ASB14A6NK59 587 aa17.06■□□□□ 0.32
PAF1-202ENST00000416728 ORC4O43929 436 aa17.06■□□□□ 0.32
PAF1-202ENST00000416728 EPHB4P54760 987 aa17.06■□□□□ 0.32
PAF1-202ENST00000416728 HDAC1Q13547 482 aaPredicted RBP17.06■□□□□ 0.32
PAF1-202ENST00000416728 ALX1Q15699 326 aa17.06■□□□□ 0.32
PAF1-202ENST00000416728 CCDC96Q2M329 555 aa17.06■□□□□ 0.32
PAF1-202ENST00000416728 NOL8Q76FK4 1167 aaKnown RBP17.06■□□□□ 0.32
PAF1-202ENST00000416728 RASGRP2Q7LDG7 609 aa17.06■□□□□ 0.32
PAF1-202ENST00000416728 A0A0U1RQG5 324 aaPredicted RBP17.05■□□□□ 0.32
PAF1-202ENST00000416728 SOWAHBA6NEL2 793 aa17.05■□□□□ 0.32
PAF1-202ENST00000416728 SNAP25P60880 206 aa17.05■□□□□ 0.32
PAF1-202ENST00000416728 TNFAIP2Q03169 654 aa17.05■□□□□ 0.32
PAF1-202ENST00000416728 MCMDC2Q4G0Z9 681 aa17.05■□□□□ 0.32
PAF1-202ENST00000416728 DCAF4Q8WV16 495 aa17.05■□□□□ 0.32
PAF1-202ENST00000416728 FAM227BQ96M60 508 aa17.05■□□□□ 0.32
PAF1-202ENST00000416728 TBX21Q9UL17 535 aa17.05■□□□□ 0.32
PAF1-202ENST00000416728 CCPG1Q9ULG6 757 aa17.05■□□□□ 0.32
PAF1-202ENST00000416728 TIMP1P01033 207 aa17.04■□□□□ 0.32
PAF1-202ENST00000416728 FGRP09769 529 aa17.04■□□□□ 0.32
PAF1-202ENST00000416728 NOVP48745 357 aa17.04■□□□□ 0.32
PAF1-202ENST00000416728 CDK7P50613 346 aa17.04■□□□□ 0.32
PAF1-202ENST00000416728 MUM1L1Q5H9M0 696 aa17.04■□□□□ 0.32
PAF1-202ENST00000416728 RRP12Q5JTH9 1297 aaKnown RBP17.04■□□□□ 0.32
PAF1-202ENST00000416728 TICAM2Q86XR7 235 aa17.04■□□□□ 0.32
PAF1-202ENST00000416728 CDX2Q99626 313 aaPredicted RBP17.04■□□□□ 0.32
PAF1-202ENST00000416728 SEMA6BQ9H3T3 888 aa17.04■□□□□ 0.32
PAF1-202ENST00000416728 A0A0D9SFI3 127 aa17.03■□□□□ 0.32
PAF1-202ENST00000416728 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.03■□□□□ 0.32
PAF1-202ENST00000416728 ARVCFO00192 962 aa17.03■□□□□ 0.32
PAF1-202ENST00000416728 FGAP02671 866 aa17.03■□□□□ 0.32
PAF1-202ENST00000416728 NKX3-2P78367 333 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms