RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 GSPT1P15170 499 aaKnown RBP17.87■□□□□ 0.45
UBXN4-203ENST00000416538 OAZ1P54368 228 aa17.87■□□□□ 0.45
UBXN4-203ENST00000416538 LRRC41Q15345 812 aa17.87■□□□□ 0.45
UBXN4-203ENST00000416538 TTBK2Q6IQ55 1244 aa17.87■□□□□ 0.45
UBXN4-203ENST00000416538 RCSD1Q6JBY9 416 aa17.87■□□□□ 0.45
UBXN4-203ENST00000416538 STAG1Q8WVM7 1258 aa17.87■□□□□ 0.45
UBXN4-203ENST00000416538 AGBL1Q96MI9 1066 aa17.87■□□□□ 0.45
UBXN4-203ENST00000416538 ASTN1O14525 1302 aa17.87■□□□□ 0.45
UBXN4-203ENST00000416538 RTP1P59025 263 aa17.86■□□□□ 0.45
UBXN4-203ENST00000416538 IRX5P78411 483 aaPredicted RBP17.86■□□□□ 0.45
UBXN4-203ENST00000416538 CWC27Q6UX04 472 aaKnown RBP17.86■□□□□ 0.45
UBXN4-203ENST00000416538 FAM160B2Q86V87 743 aa17.86■□□□□ 0.45
UBXN4-203ENST00000416538 TMEM47Q9BQJ4 181 aa17.86■□□□□ 0.45
UBXN4-203ENST00000416538 TOMM22Q9NS69 142 aa17.86■□□□□ 0.45
UBXN4-203ENST00000416538 NRBP1Q9UHY1 535 aa17.86■□□□□ 0.45
UBXN4-203ENST00000416538 PRR12Q9ULL5 1215 aa17.86■□□□□ 0.45
UBXN4-203ENST00000416538 DDX49Q9Y6V7 483 aaKnown RBP17.86■□□□□ 0.45
UBXN4-203ENST00000416538 PLA2G6O60733 806 aa17.85■□□□□ 0.45
UBXN4-203ENST00000416538 PGK1P00558 417 aa17.85■□□□□ 0.45
UBXN4-203ENST00000416538 SNX17Q15036 470 aa17.85■□□□□ 0.45
UBXN4-203ENST00000416538 AKNAD1Q5T1N1 836 aa17.85■□□□□ 0.45
UBXN4-203ENST00000416538 CCDC174Q6PII3 467 aa17.85■□□□□ 0.45
UBXN4-203ENST00000416538 MAMDC4Q6UXC1 1216 aa17.85■□□□□ 0.45
UBXN4-203ENST00000416538 CHST13Q8NET6 341 aa17.85■□□□□ 0.45
UBXN4-203ENST00000416538 DDX11Q96FC9 970 aa17.85■□□□□ 0.45
UBXN4-203ENST00000416538 LRCH3Q96II8 777 aa17.85■□□□□ 0.45
UBXN4-203ENST00000416538 SYNGAP1Q96PV0 1343 aa17.85■□□□□ 0.45
UBXN4-203ENST00000416538 KATNBL1Q9H079 304 aa17.85■□□□□ 0.45
UBXN4-203ENST00000416538 A1CFQ9NQ94 594 aaKnown RBP17.85■□□□□ 0.45
UBXN4-203ENST00000416538 RNF146Q9NTX7 359 aa17.85■□□□□ 0.45
UBXN4-203ENST00000416538 FRMPD2Q68DX3 1309 aaPredicted RBP17.84■□□□□ 0.45
UBXN4-203ENST00000416538 SYNRGQ9UMZ2 1314 aa17.84■□□□□ 0.45
UBXN4-203ENST00000416538 A0A1W2PPC1 479 aa17.84■□□□□ 0.45
UBXN4-203ENST00000416538 ADAMTS4O75173 837 aa17.84■□□□□ 0.45
UBXN4-203ENST00000416538 BMP8BP34820 402 aa17.84■□□□□ 0.45
UBXN4-203ENST00000416538 CNTN2Q02246 1040 aa17.84■□□□□ 0.45
UBXN4-203ENST00000416538 IKQ13123 557 aaPredicted RBP17.84■□□□□ 0.45
UBXN4-203ENST00000416538 CCDC96Q2M329 555 aa17.84■□□□□ 0.45
UBXN4-203ENST00000416538 MUM1L1Q5H9M0 696 aa17.84■□□□□ 0.45
UBXN4-203ENST00000416538 FAM133AQ8N9E0 248 aa17.84■□□□□ 0.45
UBXN4-203ENST00000416538 FERMT2Q96AC1 680 aa17.84■□□□□ 0.45
UBXN4-203ENST00000416538 XPNPEP3Q9NQH7 507 aa17.84■□□□□ 0.45
UBXN4-203ENST00000416538 TCP11L1Q9NUJ3 509 aa17.84■□□□□ 0.45
UBXN4-203ENST00000416538 MYADML2A6NDP7 307 aa17.83■□□□□ 0.44
UBXN4-203ENST00000416538 KBTBD13C9JR72 458 aa17.83■□□□□ 0.44
UBXN4-203ENST00000416538 TOP1P11387 765 aaKnown RBP17.83■□□□□ 0.44
UBXN4-203ENST00000416538 AKR1A1P14550 325 aa17.83■□□□□ 0.44
UBXN4-203ENST00000416538 SLC16A2P36021 539 aa17.83■□□□□ 0.44
UBXN4-203ENST00000416538 ADCYAP1R1P41586 468 aa17.83■□□□□ 0.44
UBXN4-203ENST00000416538 MDM2Q00987 491 aaPredicted RBP17.83■□□□□ 0.44
UBXN4-203ENST00000416538 TRIM60Q495X7 471 aa17.83■□□□□ 0.44
UBXN4-203ENST00000416538 PPP4R3BQ5MIZ7 849 aa17.83■□□□□ 0.44
UBXN4-203ENST00000416538 ZNF467Q7Z7K2 595 aaPredicted RBP17.83■□□□□ 0.44
UBXN4-203ENST00000416538 ANKRD35Q8N283 1001 aa17.83■□□□□ 0.44
UBXN4-203ENST00000416538 MSL3Q8N5Y2 521 aaKnown RBP17.83■□□□□ 0.44
UBXN4-203ENST00000416538 ARRDC4Q8NCT1 418 aa17.83■□□□□ 0.44
UBXN4-203ENST00000416538 CHURC1Q8WUH1 139 aa17.83■□□□□ 0.44
UBXN4-203ENST00000416538 DCAF4Q8WV16 495 aa17.83■□□□□ 0.44
UBXN4-203ENST00000416538 ACAD9Q9H845 621 aa17.83■□□□□ 0.44
UBXN4-203ENST00000416538 DIAPH3Q9NSV4 1193 aa17.83■□□□□ 0.44
UBXN4-203ENST00000416538 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.83■□□□□ 0.44
UBXN4-203ENST00000416538 PHF24Q9UPV7 400 aa17.83■□□□□ 0.44
UBXN4-203ENST00000416538 CTDP1Q9Y5B0 961 aaPredicted RBP17.83■□□□□ 0.44
UBXN4-203ENST00000416538 SOWAHBA6NEL2 793 aa17.82■□□□□ 0.44
UBXN4-203ENST00000416538 FDX1P10109 184 aa17.82■□□□□ 0.44
UBXN4-203ENST00000416538 RARBP10826 455 aa17.82■□□□□ 0.44
UBXN4-203ENST00000416538 PDHBP11177 359 aa17.82■□□□□ 0.44
UBXN4-203ENST00000416538 ALAS1P13196 640 aa17.82■□□□□ 0.44
UBXN4-203ENST00000416538 PTGS1P23219 599 aa17.82■□□□□ 0.44
UBXN4-203ENST00000416538 BTNL9Q6UXG8 535 aa17.82■□□□□ 0.44
UBXN4-203ENST00000416538 SLC39A5Q6ZMH5 540 aa17.82■□□□□ 0.44
UBXN4-203ENST00000416538 ARMCX2Q7L311 632 aa17.82■□□□□ 0.44
UBXN4-203ENST00000416538 ZKSCAN3Q9BRR0 538 aa17.82■□□□□ 0.44
UBXN4-203ENST00000416538 RANBP17Q9H2T7 1088 aaKnown RBP17.82■□□□□ 0.44
UBXN4-203ENST00000416538 FBXO40Q9UH90 709 aa17.82■□□□□ 0.44
UBXN4-203ENST00000416538 ZHX1Q9UKY1 873 aaPredicted RBP17.82■□□□□ 0.44
UBXN4-203ENST00000416538 CNPY2Q9Y2B0 182 aa17.82■□□□□ 0.44
UBXN4-203ENST00000416538 ATP11BQ9Y2G3 1177 aa17.82■□□□□ 0.44
UBXN4-203ENST00000416538 SNHG28P0DPA3 235 aa17.81■□□□□ 0.44
UBXN4-203ENST00000416538 TTC22Q5TAA0 569 aa17.81■□□□□ 0.44
UBXN4-203ENST00000416538 MFSD6Q6ZSS7 791 aa17.81■□□□□ 0.44
UBXN4-203ENST00000416538 CCDC144CPQ8IYA2 1237 aa17.81■□□□□ 0.44
UBXN4-203ENST00000416538 TRERF1Q96PN7 1200 aa17.81■□□□□ 0.44
UBXN4-203ENST00000416538 PURBQ96QR8 312 aaKnown RBP17.81■□□□□ 0.44
UBXN4-203ENST00000416538 GPCPD1Q9NPB8 672 aa17.81■□□□□ 0.44
UBXN4-203ENST00000416538 SYDE2Q5VT97 1194 aa17.8■□□□□ 0.44
UBXN4-203ENST00000416538 CCSAPQ6IQ19 270 aaPredicted RBP17.8■□□□□ 0.44
UBXN4-203ENST00000416538 SH3RF1Q7Z6J0 888 aa17.8■□□□□ 0.44
UBXN4-203ENST00000416538 CPVLQ9H3G5 476 aa17.8■□□□□ 0.44
UBXN4-203ENST00000416538 PDLIM7Q9NR12 457 aa17.8■□□□□ 0.44
UBXN4-203ENST00000416538 CCPG1Q9ULG6 757 aa17.8■□□□□ 0.44
UBXN4-203ENST00000416538 A0A1W2PQ45 241 aaPredicted RBP17.79■□□□□ 0.44
UBXN4-203ENST00000416538 A0A1W2PQY0 241 aa17.79■□□□□ 0.44
UBXN4-203ENST00000416538 B4E1Z4 1266 aa17.79■□□□□ 0.44
UBXN4-203ENST00000416538 POTEB2H3BUK9 544 aa17.79■□□□□ 0.44
UBXN4-203ENST00000416538 NFIBO00712 420 aa17.79■□□□□ 0.44
UBXN4-203ENST00000416538 CTAGE5O15320 804 aa17.79■□□□□ 0.44
UBXN4-203ENST00000416538 ICAM1P05362 532 aa17.79■□□□□ 0.44
UBXN4-203ENST00000416538 PCP11498 1178 aaKnown RBP17.79■□□□□ 0.44
UBXN4-203ENST00000416538 MFAP1P55081 439 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms