RNA–Protein interactions for RNA: ENST00000416343.2

LINC01349-201, Transcript of long intergenic non-protein coding RNA 1349, humanhuman

TSL 3 BASIC

Gene LINC01349, Length 497 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01349-201ENST00000416343 ICA1Q05084 483 aa4.34□□□□□ -1.71
LINC01349-201ENST00000416343 APOBRQ0VD83 1088 aa4.34□□□□□ -1.71
LINC01349-201ENST00000416343 CRYMQ14894 314 aa4.34□□□□□ -1.71
LINC01349-201ENST00000416343 CCDC144BQ3MJ40 725 aa4.34□□□□□ -1.71
LINC01349-201ENST00000416343 MAP9Q49MG5 647 aa4.34□□□□□ -1.71
LINC01349-201ENST00000416343 HSP90B2PQ58FF3 399 aa4.34□□□□□ -1.71
LINC01349-201ENST00000416343 CCDC30Q5VVM6 783 aa4.34□□□□□ -1.71
LINC01349-201ENST00000416343 NUTM2GQ5VZR2 741 aa4.34□□□□□ -1.71
LINC01349-201ENST00000416343 GBP6Q6ZN66 633 aa4.34□□□□□ -1.71
LINC01349-201ENST00000416343 EP400NLQ6ZTU2 488 aa4.34□□□□□ -1.71
LINC01349-201ENST00000416343 C14orf37Q86TY3 774 aa4.34□□□□□ -1.71
LINC01349-201ENST00000416343 ANKRD18AQ8IVF6 992 aa4.34□□□□□ -1.71
LINC01349-201ENST00000416343 CCDC144CPQ8IYA2 1237 aa4.34□□□□□ -1.71
LINC01349-201ENST00000416343 C2CD4AQ8NCU7 369 aaPredicted RBP4.34□□□□□ -1.71
LINC01349-201ENST00000416343 FAM71BQ8TC56 605 aa4.34□□□□□ -1.71
LINC01349-201ENST00000416343 SLC7A3Q8WY07 619 aa4.34□□□□□ -1.71
LINC01349-201ENST00000416343 EDEM1Q92611 657 aa4.34□□□□□ -1.71
LINC01349-201ENST00000416343 ERCC4Q92889 916 aaPredicted RBP4.34□□□□□ -1.71
LINC01349-201ENST00000416343 ITFG2Q969R8 447 aa4.34□□□□□ -1.71
LINC01349-201ENST00000416343 MIEF2Q96C03 454 aa4.34□□□□□ -1.71
LINC01349-201ENST00000416343 SGSM3Q96HU1 749 aa4.34□□□□□ -1.71
LINC01349-201ENST00000416343 PPP1R13BQ96KQ4 1090 aa4.34□□□□□ -1.71
LINC01349-201ENST00000416343 OSMRQ99650 979 aa4.34□□□□□ -1.71
LINC01349-201ENST00000416343 NAT10Q9H0A0 1025 aaKnown RBP4.34□□□□□ -1.71
LINC01349-201ENST00000416343 SMC3Q9UQE7 1217 aa4.34□□□□□ -1.71
LINC01349-201ENST00000416343 LEMD3Q9Y2U8 911 aa4.34□□□□□ -1.71
LINC01349-201ENST00000416343 SH3BP1Q9Y3L3 701 aa4.34□□□□□ -1.71
LINC01349-201ENST00000416343 CCDC9Q9Y3X0 531 aaKnown RBP4.34□□□□□ -1.71
LINC01349-201ENST00000416343 ABCC4O15439 1325 aa4.34□□□□□ -1.71
LINC01349-201ENST00000416343 NPHP3Q7Z494 1330 aa4.34□□□□□ -1.71
LINC01349-201ENST00000416343 NSD2O96028 1365 aa4.34□□□□□ -1.71
LINC01349-201ENST00000416343 FAM135BQ49AJ0 1406 aa4.34□□□□□ -1.71
LINC01349-201ENST00000416343 PLA2R1Q13018 1463 aa4.34□□□□□ -1.71
LINC01349-201ENST00000416343 GPATCH8Q9UKJ3 1502 aaKnown RBP4.34□□□□□ -1.71
LINC01349-201ENST00000416343 NESP48681 1621 aa4.34□□□□□ -1.71
LINC01349-201ENST00000416343 CLTCL1P53675 1640 aa4.34□□□□□ -1.71
LINC01349-201ENST00000416343 ZNF518AQ6AHZ1 1483 aa4.33□□□□□ -1.72
LINC01349-201ENST00000416343 PTCH1Q13635 1447 aa4.33□□□□□ -1.72
LINC01349-201ENST00000416343 SBNO2Q9Y2G9 1366 aa4.33□□□□□ -1.72
LINC01349-201ENST00000416343 ATXN2Q99700 1313 aaKnown RBP4.33□□□□□ -1.72
LINC01349-201ENST00000416343 A6NHS1 94 aa4.33□□□□□ -1.72
LINC01349-201ENST00000416343 USP27XA6NNY8 438 aa4.33□□□□□ -1.72
LINC01349-201ENST00000416343 CHUKO15111 745 aa4.33□□□□□ -1.72
LINC01349-201ENST00000416343 NPHP1O15259 732 aa4.33□□□□□ -1.72
LINC01349-201ENST00000416343 FIBPO43427 364 aa4.33□□□□□ -1.72
LINC01349-201ENST00000416343 MYO1BO43795 1136 aa4.33□□□□□ -1.72
LINC01349-201ENST00000416343 GAS2O43903 313 aaKnown RBP4.33□□□□□ -1.72
LINC01349-201ENST00000416343 HMMRO75330 724 aa4.33□□□□□ -1.72
LINC01349-201ENST00000416343 U2AF1L5P0DN76 240 aaPredicted RBP4.33□□□□□ -1.72
LINC01349-201ENST00000416343 DRD2P14416 443 aa4.33□□□□□ -1.72
LINC01349-201ENST00000416343 GCFC2P16383 781 aaKnown RBP4.33□□□□□ -1.72
LINC01349-201ENST00000416343 NPR3P17342 541 aa4.33□□□□□ -1.72
LINC01349-201ENST00000416343 ATP2B4P23634 1241 aa4.33□□□□□ -1.72
LINC01349-201ENST00000416343 HNRNPH1P31943 449 aaKnown RBP4.33□□□□□ -1.72
LINC01349-201ENST00000416343 RDXP35241 583 aaKnown RBP4.33□□□□□ -1.72
LINC01349-201ENST00000416343 ADMP35318 185 aa4.33□□□□□ -1.72
LINC01349-201ENST00000416343 ARL4DP49703 201 aa4.33□□□□□ -1.72
LINC01349-201ENST00000416343 MTHFSP49914 203 aa4.33□□□□□ -1.72
LINC01349-201ENST00000416343 MRPL12P52815 198 aaKnown RBP4.33□□□□□ -1.72
LINC01349-201ENST00000416343 U2AF1Q01081 240 aaKnown RBP eCLIP4.33□□□□□ -1.72
LINC01349-201ENST00000416343 DNM1Q05193 864 aaKnown RBP4.33□□□□□ -1.72
LINC01349-201ENST00000416343 IKBKEQ14164 716 aa4.33□□□□□ -1.72
LINC01349-201ENST00000416343 IQCB1Q15051 598 aa4.33□□□□□ -1.72
LINC01349-201ENST00000416343 STX1AQ16623 288 aa4.33□□□□□ -1.72
LINC01349-201ENST00000416343 LONRF2Q1L5Z9 754 aa4.33□□□□□ -1.72
LINC01349-201ENST00000416343 PEAR1Q5VY43 1037 aaPredicted RBP4.33□□□□□ -1.72
LINC01349-201ENST00000416343 E4F1Q66K89 784 aaPredicted RBP4.33□□□□□ -1.72
LINC01349-201ENST00000416343 CDPF1Q6NVV7 123 aa4.33□□□□□ -1.72
LINC01349-201ENST00000416343 LRRC31Q6UY01 552 aa4.33□□□□□ -1.72
LINC01349-201ENST00000416343 RSRC2Q7L4I2 434 aaKnown RBP4.33□□□□□ -1.72
LINC01349-201ENST00000416343 CCDC50Q8IVM0 306 aa4.33□□□□□ -1.72
LINC01349-201ENST00000416343 TEX11Q8IYF3 940 aa4.33□□□□□ -1.72
LINC01349-201ENST00000416343 POU5F2Q8N7G0 328 aa4.33□□□□□ -1.72
LINC01349-201ENST00000416343 C12orf50Q8NA57 414 aaPredicted RBP4.33□□□□□ -1.72
LINC01349-201ENST00000416343 CTCFLQ8NI51 663 aaPredicted RBP4.33□□□□□ -1.72
LINC01349-201ENST00000416343 BICD2Q8TD16 824 aa4.33□□□□□ -1.72
LINC01349-201ENST00000416343 MAGEC3Q8TD91 643 aa4.33□□□□□ -1.72
LINC01349-201ENST00000416343 GOLGA1Q92805 767 aa4.33□□□□□ -1.72
LINC01349-201ENST00000416343 TSR2Q969E8 191 aaKnown RBP4.33□□□□□ -1.72
LINC01349-201ENST00000416343 PSMD1Q99460 953 aa4.33□□□□□ -1.72
LINC01349-201ENST00000416343 PAIP2Q9BPZ3 127 aaKnown RBP4.33□□□□□ -1.72
LINC01349-201ENST00000416343 TEX13AQ9BXU3 409 aaPredicted RBP4.33□□□□□ -1.72
LINC01349-201ENST00000416343 VIPAS39Q9H9C1 493 aa4.33□□□□□ -1.72
LINC01349-201ENST00000416343 VEZTQ9HBM0 779 aa4.33□□□□□ -1.72
LINC01349-201ENST00000416343 CYP4F12Q9HCS2 524 aa4.33□□□□□ -1.72
LINC01349-201ENST00000416343 TRMT1Q9NXH9 659 aaKnown RBP4.33□□□□□ -1.72
LINC01349-201ENST00000416343 MCM8Q9UJA3 840 aa4.33□□□□□ -1.72
LINC01349-201ENST00000416343 MTMR6Q9Y217 621 aa4.33□□□□□ -1.72
LINC01349-201ENST00000416343 PRDM2Q13029 1718 aa4.32□□□□□ -1.72
LINC01349-201ENST00000416343 WDR62O43379 1518 aa4.32□□□□□ -1.72
LINC01349-201ENST00000416343 TRAPPC8Q9Y2L5 1435 aa4.32□□□□□ -1.72
LINC01349-201ENST00000416343 AOX1Q06278 1338 aa4.32□□□□□ -1.72
LINC01349-201ENST00000416343 A0A1B0GUA9 196 aa4.32□□□□□ -1.72
LINC01349-201ENST00000416343 FAM95CA0A1B0GW59 222 aa4.32□□□□□ -1.72
LINC01349-201ENST00000416343 BECN2A8MW95 431 aa4.32□□□□□ -1.72
LINC01349-201ENST00000416343 EREGO14944 169 aa4.32□□□□□ -1.72
LINC01349-201ENST00000416343 VAMP4O75379 141 aa4.32□□□□□ -1.72
LINC01349-201ENST00000416343 TNFRSF21O75509 655 aa4.32□□□□□ -1.72
LINC01349-201ENST00000416343 IPO7O95373 1038 aaKnown RBP4.32□□□□□ -1.72
LINC01349-201ENST00000416343 ESRRAP11474 423 aaPredicted RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms