RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 KRT23Q9C075 422 aa20.45■□□□□ 0.86
HSPG2-204ENST00000412328 BAZ2BQ9UIF8 2168 aaKnown RBP20.44■□□□□ 0.86
HSPG2-204ENST00000412328 SLC16A2P36021 539 aa20.44■□□□□ 0.86
HSPG2-204ENST00000412328 SNAP25P60880 206 aa20.44■□□□□ 0.86
HSPG2-204ENST00000412328 COL9A3Q14050 684 aaPredicted RBP20.44■□□□□ 0.86
HSPG2-204ENST00000412328 IQCA1Q86XH1 822 aa20.44■□□□□ 0.86
HSPG2-204ENST00000412328 PNMA1Q8ND90 353 aa20.44■□□□□ 0.86
HSPG2-204ENST00000412328 CHST13Q8NET6 341 aa20.44■□□□□ 0.86
HSPG2-204ENST00000412328 MTMR7Q9Y216 660 aa20.44■□□□□ 0.86
HSPG2-204ENST00000412328 RBM8AQ9Y5S9 174 aaKnown RBP20.44■□□□□ 0.86
HSPG2-204ENST00000412328 KIAA1217Q5T5P2 1943 aa20.44■□□□□ 0.86
HSPG2-204ENST00000412328 ASTN1O14525 1302 aa20.44■□□□□ 0.86
HSPG2-204ENST00000412328 E7EWF7 191 aa20.43■□□□□ 0.86
HSPG2-204ENST00000412328 SYDE2Q5VT97 1194 aa20.43■□□□□ 0.86
HSPG2-204ENST00000412328 CCDC136Q96JN2 1154 aa20.43■□□□□ 0.86
HSPG2-204ENST00000412328 DDX20Q9UHI6 824 aaKnown RBP20.43■□□□□ 0.86
HSPG2-204ENST00000412328 PFASO15067 1338 aa20.43■□□□□ 0.86
HSPG2-204ENST00000412328 TFRCP02786 760 aaKnown RBP20.42■□□□□ 0.86
HSPG2-204ENST00000412328 ICAM1P05362 532 aa20.42■□□□□ 0.86
HSPG2-204ENST00000412328 COL6A1P12109 1028 aa20.42■□□□□ 0.86
HSPG2-204ENST00000412328 ANTXR2P58335 489 aa20.42■□□□□ 0.86
HSPG2-204ENST00000412328 MUM1L1Q5H9M0 696 aa20.42■□□□□ 0.86
HSPG2-204ENST00000412328 MB21D2Q8IYB1 491 aaPredicted RBP20.42■□□□□ 0.86
HSPG2-204ENST00000412328 TINF2Q9BSI4 451 aa20.42■□□□□ 0.86
HSPG2-204ENST00000412328 ACAD9Q9H845 621 aa20.42■□□□□ 0.86
HSPG2-204ENST00000412328 A1CFQ9NQ94 594 aaKnown RBP20.42■□□□□ 0.86
HSPG2-204ENST00000412328 RNF146Q9NTX7 359 aa20.42■□□□□ 0.86
HSPG2-204ENST00000412328 SLC5A4Q9NY91 659 aa20.42■□□□□ 0.86
HSPG2-204ENST00000412328 FBXO40Q9UH90 709 aa20.42■□□□□ 0.86
HSPG2-204ENST00000412328 IKQ13123 557 aaPredicted RBP20.41■□□□□ 0.86
HSPG2-204ENST00000412328 CCDC178Q5BJE1 867 aa20.41■□□□□ 0.86
HSPG2-204ENST00000412328 CCDC174Q6PII3 467 aa20.41■□□□□ 0.86
HSPG2-204ENST00000412328 MAMDC4Q6UXC1 1216 aa20.41■□□□□ 0.86
HSPG2-204ENST00000412328 ZNF467Q7Z7K2 595 aaPredicted RBP20.41■□□□□ 0.86
HSPG2-204ENST00000412328 FAM133AQ8N9E0 248 aa20.41■□□□□ 0.86
HSPG2-204ENST00000412328 PAWRQ96IZ0 340 aaKnown RBP20.41■□□□□ 0.86
HSPG2-204ENST00000412328 CPVLQ9H3G5 476 aa20.41■□□□□ 0.86
HSPG2-204ENST00000412328 SENP2Q9HC62 589 aa20.41■□□□□ 0.86
HSPG2-204ENST00000412328 GPCPD1Q9NPB8 672 aa20.41■□□□□ 0.86
HSPG2-204ENST00000412328 HOMER2Q9NSB8 354 aa20.41■□□□□ 0.86
HSPG2-204ENST00000412328 ISY1Q9ULR0 285 aaKnown RBP20.41■□□□□ 0.86
HSPG2-204ENST00000412328 SYNGAP1Q96PV0 1343 aa20.41■□□□□ 0.86
HSPG2-204ENST00000412328 ZNF865P0CJ78 1059 aaPredicted RBP20.4■□□□□ 0.86
HSPG2-204ENST00000412328 GOLGA8HP0CJ92 632 aa20.4■□□□□ 0.86
HSPG2-204ENST00000412328 RANBP2P49792 3224 aaKnown RBP20.4■□□□□ 0.86
HSPG2-204ENST00000412328 TKFCQ3LXA3 575 aa20.4■□□□□ 0.86
HSPG2-204ENST00000412328 PRAMEF19Q5SWL8 479 aa20.4■□□□□ 0.86
HSPG2-204ENST00000412328 GPATCH4Q5T3I0 446 aaKnown RBP20.4■□□□□ 0.86
HSPG2-204ENST00000412328 KATNBL1Q9H079 304 aa20.4■□□□□ 0.86
HSPG2-204ENST00000412328 NRBP1Q9UHY1 535 aa20.4■□□□□ 0.86
HSPG2-204ENST00000412328 WDR19Q8NEZ3 1342 aa20.39■□□□□ 0.85
HSPG2-204ENST00000412328 SEPT4O43236 478 aa20.39■□□□□ 0.85
HSPG2-204ENST00000412328 SNAI1O95863 264 aaPredicted RBP20.39■□□□□ 0.85
HSPG2-204ENST00000412328 NECTIN1Q15223 517 aa20.39■□□□□ 0.85
HSPG2-204ENST00000412328 MSL3Q8N5Y2 521 aaKnown RBP20.39■□□□□ 0.85
HSPG2-204ENST00000412328 KAT14Q9H8E8 782 aa20.39■□□□□ 0.85
HSPG2-204ENST00000412328 MSCO60682 206 aa20.38■□□□□ 0.85
HSPG2-204ENST00000412328 CNTN2Q02246 1040 aa20.38■□□□□ 0.85
HSPG2-204ENST00000412328 SLC35G1Q2M3R5 365 aa20.38■□□□□ 0.85
HSPG2-204ENST00000412328 ASPRV1Q53RT3 343 aa20.38■□□□□ 0.85
HSPG2-204ENST00000412328 TRERF1Q96PN7 1200 aa20.38■□□□□ 0.85
HSPG2-204ENST00000412328 UBAC1Q9BSL1 405 aa20.38■□□□□ 0.85
HSPG2-204ENST00000412328 CYP39A1Q9NYL5 469 aa20.38■□□□□ 0.85
HSPG2-204ENST00000412328 CCPG1Q9ULG6 757 aa20.38■□□□□ 0.85
HSPG2-204ENST00000412328 CTDP1Q9Y5B0 961 aaPredicted RBP20.38■□□□□ 0.85
HSPG2-204ENST00000412328 SOWAHBA6NEL2 793 aa20.37■□□□□ 0.85
HSPG2-204ENST00000412328 SLC27A2O14975 620 aa20.37■□□□□ 0.85
HSPG2-204ENST00000412328 CDC45O75419 566 aa20.37■□□□□ 0.85
HSPG2-204ENST00000412328 ALAS1P13196 640 aa20.37■□□□□ 0.85
HSPG2-204ENST00000412328 SLC4A3P48751 1232 aa20.37■□□□□ 0.85
HSPG2-204ENST00000412328 ANKRD35Q8N283 1001 aa20.37■□□□□ 0.85
HSPG2-204ENST00000412328 NCOA7Q8NI08 942 aa20.37■□□□□ 0.85
HSPG2-204ENST00000412328 CLEC4DQ8WXI8 215 aa20.37■□□□□ 0.85
HSPG2-204ENST00000412328 NFIBO00712 420 aa20.36■□□□□ 0.85
HSPG2-204ENST00000412328 ADCY6O43306 1168 aa20.36■□□□□ 0.85
HSPG2-204ENST00000412328 IFIT1BQ5T764 474 aaKnown RBP20.36■□□□□ 0.85
HSPG2-204ENST00000412328 NECAB2Q7Z6G3 386 aa20.36■□□□□ 0.85
HSPG2-204ENST00000412328 STAG2Q8N3U4 1231 aa20.36■□□□□ 0.85
HSPG2-204ENST00000412328 DDX11Q96FC9 970 aa20.36■□□□□ 0.85
HSPG2-204ENST00000412328 HTATIP2Q9BUP3 242 aa20.36■□□□□ 0.85
HSPG2-204ENST00000412328 C11orf49Q9H6J7 331 aa20.36■□□□□ 0.85
HSPG2-204ENST00000412328 CREB3L3Q68CJ9 461 aa20.35■□□□□ 0.85
HSPG2-204ENST00000412328 CHST3Q7LGC8 479 aa20.35■□□□□ 0.85
HSPG2-204ENST00000412328 IGDCC4Q8TDY8 1250 aa20.35■□□□□ 0.85
HSPG2-204ENST00000412328 LENG1Q96BZ8 264 aaPredicted RBP20.35■□□□□ 0.85
HSPG2-204ENST00000412328 UBA5Q9GZZ9 404 aa20.35■□□□□ 0.85
HSPG2-204ENST00000412328 ANO2Q9NQ90 1003 aa20.35■□□□□ 0.85
HSPG2-204ENST00000412328 MAD2L2Q9UI95 211 aa20.35■□□□□ 0.85
HSPG2-204ENST00000412328 PALM3A6NDB9 673 aaPredicted RBP20.34■□□□□ 0.85
HSPG2-204ENST00000412328 CNGA1P29973 690 aa20.34■□□□□ 0.85
HSPG2-204ENST00000412328 TROAPQ12815 778 aa20.34■□□□□ 0.85
HSPG2-204ENST00000412328 TRDNQ13061 729 aa20.34■□□□□ 0.85
HSPG2-204ENST00000412328 GRM4Q14833 912 aa20.34■□□□□ 0.85
HSPG2-204ENST00000412328 CDC37Q16543 378 aaPredicted RBP20.34■□□□□ 0.85
HSPG2-204ENST00000412328 ANO1Q5XXA6 986 aa20.34■□□□□ 0.85
HSPG2-204ENST00000412328 SLC30A10Q6XR72 485 aa20.34■□□□□ 0.85
HSPG2-204ENST00000412328 ARMCX2Q7L311 632 aa20.34■□□□□ 0.85
HSPG2-204ENST00000412328 RALYLQ86SE5 291 aaKnown RBP20.34■□□□□ 0.85
HSPG2-204ENST00000412328 ADGRF4Q8IZF3 695 aa20.34■□□□□ 0.85
HSPG2-204ENST00000412328 MTMR8Q96EF0 704 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms