RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 BAG1Q99933 345 aaPredicted RBP22.42■■□□□ 1.18
LIMS2-207ENST00000409808 IDI2Q9BXS1 227 aa22.42■■□□□ 1.18
LIMS2-207ENST00000409808 CNTNAP5Q8WYK1 1306 aa22.42■■□□□ 1.18
LIMS2-207ENST00000409808 SIPA1L1O43166 1804 aa22.42■■□□□ 1.18
LIMS2-207ENST00000409808 TMEM232C9JQI7 657 aa22.42■■□□□ 1.18
LIMS2-207ENST00000409808 BMP15O95972 392 aa22.42■■□□□ 1.18
LIMS2-207ENST00000409808 HLA-DOAP06340 250 aa22.42■■□□□ 1.18
LIMS2-207ENST00000409808 EIF6P56537 245 aaKnown RBP22.42■■□□□ 1.18
LIMS2-207ENST00000409808 CXCL9Q07325 125 aa22.42■■□□□ 1.18
LIMS2-207ENST00000409808 INTS13Q9NVM9 706 aa22.42■■□□□ 1.18
LIMS2-207ENST00000409808 VPS54Q9P1Q0 977 aa22.42■■□□□ 1.18
LIMS2-207ENST00000409808 PPP2R2CQ9Y2T4 447 aa22.42■■□□□ 1.18
LIMS2-207ENST00000409808 NFE2L3Q9Y4A8 694 aa22.42■■□□□ 1.18
LIMS2-207ENST00000409808 CD2APQ9Y5K6 639 aa22.42■■□□□ 1.18
LIMS2-207ENST00000409808 PRPF3O43395 683 aaKnown RBP22.41■■□□□ 1.18
LIMS2-207ENST00000409808 VEGFAP15692 232 aaPredicted RBP22.41■■□□□ 1.18
LIMS2-207ENST00000409808 NT5C2P49902 561 aa22.41■■□□□ 1.18
LIMS2-207ENST00000409808 CCDC178Q5BJE1 867 aa22.41■■□□□ 1.18
LIMS2-207ENST00000409808 UBXN4Q92575 508 aa22.41■■□□□ 1.18
LIMS2-207ENST00000409808 DNAJC18Q9H819 358 aa22.41■■□□□ 1.18
LIMS2-207ENST00000409808 ARGLU1Q9NWB6 273 aaPredicted RBP22.41■■□□□ 1.18
LIMS2-207ENST00000409808 FOXN1O15353 648 aa22.41■■□□□ 1.18
LIMS2-207ENST00000409808 MAD2L2Q9UI95 211 aa22.41■■□□□ 1.18
LIMS2-207ENST00000409808 SRCAPQ6ZRS2 3230 aa22.41■■□□□ 1.18
LIMS2-207ENST00000409808 CLRN2A0PK11 232 aa22.4■■□□□ 1.18
LIMS2-207ENST00000409808 ACTN4O43707 911 aaKnown RBP22.4■■□□□ 1.18
LIMS2-207ENST00000409808 GOLGA8HP0CJ92 632 aa22.4■■□□□ 1.18
LIMS2-207ENST00000409808 SHROOM1Q2M3G4 852 aaPredicted RBP22.4■■□□□ 1.18
LIMS2-207ENST00000409808 CREBRFQ8IUR6 639 aa22.4■■□□□ 1.18
LIMS2-207ENST00000409808 MNS1Q8NEH6 495 aa22.4■■□□□ 1.18
LIMS2-207ENST00000409808 VPS33BQ9H267 617 aa22.4■■□□□ 1.18
LIMS2-207ENST00000409808 PCDHB6Q9Y5E3 794 aa22.4■■□□□ 1.18
LIMS2-207ENST00000409808 EFCAB8A8MWE9 144 aa22.4■■□□□ 1.18
LIMS2-207ENST00000409808 SPECC1Q5M775 1068 aa22.4■■□□□ 1.18
LIMS2-207ENST00000409808 MYO3BQ8WXR4 1341 aa22.4■■□□□ 1.18
LIMS2-207ENST00000409808 KIF5BP33176 963 aa22.39■■□□□ 1.17
LIMS2-207ENST00000409808 RASSF7Q02833 373 aa22.39■■□□□ 1.17
LIMS2-207ENST00000409808 GRM4Q14833 912 aa22.39■■□□□ 1.17
LIMS2-207ENST00000409808 OXER1Q8TDS5 423 aa22.39■■□□□ 1.17
LIMS2-207ENST00000409808 CPVLQ9H3G5 476 aa22.39■■□□□ 1.17
LIMS2-207ENST00000409808 SHTN1A0MZ66 631 aa22.39■■□□□ 1.17
LIMS2-207ENST00000409808 SPDYE2BA6NHP3 402 aa22.39■■□□□ 1.17
LIMS2-207ENST00000409808 TRIM75PA6NK02 468 aa22.39■■□□□ 1.17
LIMS2-207ENST00000409808 SPDYE6P0CI01 402 aa22.39■■□□□ 1.17
LIMS2-207ENST00000409808 SLC35G1Q2M3R5 365 aa22.39■■□□□ 1.17
LIMS2-207ENST00000409808 SWAP70Q9UH65 585 aa22.39■■□□□ 1.17
LIMS2-207ENST00000409808 VWA3AA6NCI4 1184 aa22.38■■□□□ 1.17
LIMS2-207ENST00000409808 TCP10L2B9ZVM9 353 aa22.38■■□□□ 1.17
LIMS2-207ENST00000409808 MPHOSPH10O00566 681 aaKnown RBP22.38■■□□□ 1.17
LIMS2-207ENST00000409808 GRIN1Q05586 938 aa22.38■■□□□ 1.17
LIMS2-207ENST00000409808 FMR1Q06787 632 aaKnown RBP eCLIP22.38■■□□□ 1.17
LIMS2-207ENST00000409808 NR5A1Q13285 461 aa22.38■■□□□ 1.17
LIMS2-207ENST00000409808 NR1I3Q14994 352 aa22.38■■□□□ 1.17
LIMS2-207ENST00000409808 ARHGAP29Q52LW3 1261 aa22.38■■□□□ 1.17
LIMS2-207ENST00000409808 TC2NQ8N9U0 490 aa22.38■■□□□ 1.17
LIMS2-207ENST00000409808 CABP5Q9NP86 173 aa22.38■■□□□ 1.17
LIMS2-207ENST00000409808 MTMR4Q9NYA4 1195 aa22.38■■□□□ 1.17
LIMS2-207ENST00000409808 ZHX1Q9UKY1 873 aaPredicted RBP22.38■■□□□ 1.17
LIMS2-207ENST00000409808 URI1O94763 535 aaPredicted RBP22.37■■□□□ 1.17
LIMS2-207ENST00000409808 PRR29P0C7W0 189 aa22.37■■□□□ 1.17
LIMS2-207ENST00000409808 DLGAP5Q15398 846 aa22.37■■□□□ 1.17
LIMS2-207ENST00000409808 OGFOD1Q8N543 542 aa22.37■■□□□ 1.17
LIMS2-207ENST00000409808 FERMT2Q96AC1 680 aa22.37■■□□□ 1.17
LIMS2-207ENST00000409808 CSRNP2Q9H175 543 aa22.37■■□□□ 1.17
LIMS2-207ENST00000409808 SLFN14P0C7P3 912 aa22.37■■□□□ 1.17
LIMS2-207ENST00000409808 PRELPP51888 382 aa22.37■■□□□ 1.17
LIMS2-207ENST00000409808 USP17L2Q6R6M4 530 aa22.37■■□□□ 1.17
LIMS2-207ENST00000409808 LRRC47Q8N1G4 583 aaKnown RBP22.37■■□□□ 1.17
LIMS2-207ENST00000409808 JDP2Q8WYK2 163 aa22.37■■□□□ 1.17
LIMS2-207ENST00000409808 DHX36Q9H2U1 1008 aaKnown RBP22.37■■□□□ 1.17
LIMS2-207ENST00000409808 ZNF446Q9NWS9 450 aa22.37■■□□□ 1.17
LIMS2-207ENST00000409808 HDAC9Q9UKV0 1011 aa22.37■■□□□ 1.17
LIMS2-207ENST00000409808 ATP8B1O43520 1251 aa22.36■■□□□ 1.17
LIMS2-207ENST00000409808 CASQ1P31415 396 aa22.36■■□□□ 1.17
LIMS2-207ENST00000409808 PDILTQ8N807 584 aa22.36■■□□□ 1.17
LIMS2-207ENST00000409808 EHD4Q9H223 541 aa22.36■■□□□ 1.17
LIMS2-207ENST00000409808 PI4KBQ9UBF8 816 aa22.36■■□□□ 1.17
LIMS2-207ENST00000409808 IGKV6D-41A0A0C4DH26 115 aa22.36■■□□□ 1.17
LIMS2-207ENST00000409808 A0A1B0GTH6 734 aa22.36■■□□□ 1.17
LIMS2-207ENST00000409808 TADA3O75528 432 aa22.36■■□□□ 1.17
LIMS2-207ENST00000409808 KRT2P35908 639 aa22.36■■□□□ 1.17
LIMS2-207ENST00000409808 TERF2Q15554 542 aa22.36■■□□□ 1.17
LIMS2-207ENST00000409808 ZNF771Q7L3S4 317 aaPredicted RBP22.36■■□□□ 1.17
LIMS2-207ENST00000409808 PANX2Q96RD6 677 aa22.36■■□□□ 1.17
LIMS2-207ENST00000409808 PLIN4Q96Q06 1357 aa22.35■■□□□ 1.17
LIMS2-207ENST00000409808 CYTH3O43739 400 aa22.35■■□□□ 1.17
LIMS2-207ENST00000409808 NOVP48745 357 aa22.35■■□□□ 1.17
LIMS2-207ENST00000409808 CLCN6P51797 869 aa22.35■■□□□ 1.17
LIMS2-207ENST00000409808 SPATA1Q5VX52 437 aa22.35■■□□□ 1.17
LIMS2-207ENST00000409808 CIAPIN1Q6FI81 312 aa22.35■■□□□ 1.17
LIMS2-207ENST00000409808 PHF20Q9BVI0 1012 aa22.35■■□□□ 1.17
LIMS2-207ENST00000409808 NAA15Q9BXJ9 866 aaKnown RBP22.35■■□□□ 1.17
LIMS2-207ENST00000409808 BRMS1Q9HCU9 246 aa22.35■■□□□ 1.17
LIMS2-207ENST00000409808 ZNF70Q9UC06 446 aaPredicted RBP22.35■■□□□ 1.17
LIMS2-207ENST00000409808 PALM3A6NDB9 673 aaPredicted RBP22.35■■□□□ 1.17
LIMS2-207ENST00000409808 USP17L5A8MUK1 530 aa22.35■■□□□ 1.17
LIMS2-207ENST00000409808 SH3RF1Q7Z6J0 888 aa22.35■■□□□ 1.17
LIMS2-207ENST00000409808 CTAGE1Q96RT6 745 aa22.35■■□□□ 1.17
LIMS2-207ENST00000409808 MAP3K9P80192 1104 aa22.34■■□□□ 1.17
LIMS2-207ENST00000409808 ATP2B2Q01814 1243 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms