RNA–Protein interactions for RNA: ENST00000409760.1

VAMP8-202, Transcript of vesicle associated membrane protein 8, humanhuman

TSL 3 BASIC

Gene VAMP8, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP8-202ENST00000409760 TBC1D10CQ8IV04 446 aa11.25□□□□□ -0.61
VAMP8-202ENST00000409760 LRRC47Q8N1G4 583 aaKnown RBP11.25□□□□□ -0.61
VAMP8-202ENST00000409760 ANKS1AQ92625 1134 aa11.25□□□□□ -0.61
VAMP8-202ENST00000409760 MAP4K1Q92918 833 aa11.25□□□□□ -0.61
VAMP8-202ENST00000409760 NUP88Q99567 741 aaPredicted RBP11.25□□□□□ -0.61
VAMP8-202ENST00000409760 UBAC1Q9BSL1 405 aa11.25□□□□□ -0.61
VAMP8-202ENST00000409760 TEX13BQ9BXU2 312 aa11.25□□□□□ -0.61
VAMP8-202ENST00000409760 MTMR10Q9NXD2 777 aa11.25□□□□□ -0.61
VAMP8-202ENST00000409760 FBXO40Q9UH90 709 aa11.25□□□□□ -0.61
VAMP8-202ENST00000409760 TMEM232C9JQI7 657 aa11.24□□□□□ -0.61
VAMP8-202ENST00000409760 KDM4AO75164 1064 aa11.24□□□□□ -0.61
VAMP8-202ENST00000409760 CDC45O75419 566 aa11.24□□□□□ -0.61
VAMP8-202ENST00000409760 PGK2P07205 417 aa11.24□□□□□ -0.61
VAMP8-202ENST00000409760 FCER1AP12319 257 aa11.24□□□□□ -0.61
VAMP8-202ENST00000409760 TAL1P17542 331 aaPredicted RBP11.24□□□□□ -0.61
VAMP8-202ENST00000409760 IKQ13123 557 aaPredicted RBP11.24□□□□□ -0.61
VAMP8-202ENST00000409760 SART3Q15020 963 aaKnown RBP11.24□□□□□ -0.61
VAMP8-202ENST00000409760 LRRC41Q15345 812 aa11.24□□□□□ -0.61
VAMP8-202ENST00000409760 GPATCH4Q5T3I0 446 aaKnown RBP11.24□□□□□ -0.61
VAMP8-202ENST00000409760 SLC39A5Q6ZMH5 540 aa11.24□□□□□ -0.61
VAMP8-202ENST00000409760 RALYLQ86SE5 291 aaKnown RBP11.24□□□□□ -0.61
VAMP8-202ENST00000409760 DEFB123Q8N688 67 aa11.24□□□□□ -0.61
VAMP8-202ENST00000409760 TMEM47Q9BQJ4 181 aa11.24□□□□□ -0.61
VAMP8-202ENST00000409760 ESYT1Q9BSJ8 1104 aa11.24□□□□□ -0.61
VAMP8-202ENST00000409760 INCENPQ9NQS7 918 aa11.24□□□□□ -0.61
VAMP8-202ENST00000409760 NRBP1Q9UHY1 535 aa11.24□□□□□ -0.61
VAMP8-202ENST00000409760 DNAJC25-GNG10A0A024R161 153 aa11.23□□□□□ -0.61
VAMP8-202ENST00000409760 ERICH2A1L162 156 aa11.23□□□□□ -0.61
VAMP8-202ENST00000409760 POTEB2H3BUK9 544 aa11.23□□□□□ -0.61
VAMP8-202ENST00000409760 NMT2O60551 498 aa11.23□□□□□ -0.61
VAMP8-202ENST00000409760 ZNF865P0CJ78 1059 aaPredicted RBP11.23□□□□□ -0.61
VAMP8-202ENST00000409760 MCCP23508 829 aa11.23□□□□□ -0.61
VAMP8-202ENST00000409760 KCTD2Q14681 263 aa11.23□□□□□ -0.61
VAMP8-202ENST00000409760 TKFCQ3LXA3 575 aa11.23□□□□□ -0.61
VAMP8-202ENST00000409760 RNF20Q5VTR2 975 aa11.23□□□□□ -0.61
VAMP8-202ENST00000409760 C1orf53Q5VUE5 145 aa11.23□□□□□ -0.61
VAMP8-202ENST00000409760 SAMD1Q6SPF0 538 aaPredicted RBP11.23□□□□□ -0.61
VAMP8-202ENST00000409760 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.23□□□□□ -0.61
VAMP8-202ENST00000409760 ARRDC4Q8NCT1 418 aa11.23□□□□□ -0.61
VAMP8-202ENST00000409760 CHST13Q8NET6 341 aa11.23□□□□□ -0.61
VAMP8-202ENST00000409760 NCOA7Q8NI08 942 aa11.23□□□□□ -0.61
VAMP8-202ENST00000409760 KIFC2Q96AC6 838 aa11.23□□□□□ -0.61
VAMP8-202ENST00000409760 FGD4Q96M96 766 aa11.23□□□□□ -0.61
VAMP8-202ENST00000409760 ZSCAN10Q96SZ4 725 aaPredicted RBP11.23□□□□□ -0.61
VAMP8-202ENST00000409760 MMP19Q99542 508 aa11.23□□□□□ -0.61
VAMP8-202ENST00000409760 TINF2Q9BSI4 451 aa11.23□□□□□ -0.61
VAMP8-202ENST00000409760 MTA3Q9BTC8 594 aa11.23□□□□□ -0.61
VAMP8-202ENST00000409760 KAT14Q9H8E8 782 aa11.23□□□□□ -0.61
VAMP8-202ENST00000409760 SLC38A10Q9HBR0 1119 aa11.23□□□□□ -0.61
VAMP8-202ENST00000409760 ISY1Q9ULR0 285 aaKnown RBP11.23□□□□□ -0.61
VAMP8-202ENST00000409760 DIS3Q9Y2L1 958 aaKnown RBP11.23□□□□□ -0.61
VAMP8-202ENST00000409760 RIPK3Q9Y572 518 aa11.23□□□□□ -0.61
VAMP8-202ENST00000409760 TACC3Q9Y6A5 838 aa11.23□□□□□ -0.61
VAMP8-202ENST00000409760 A0A0C4DFX4 3053 aa11.23□□□□□ -0.61
VAMP8-202ENST00000409760 ZNFX1Q9P2E3 1918 aaKnown RBP11.23□□□□□ -0.61
VAMP8-202ENST00000409760 TRIM43BA6NCK2 446 aa11.22□□□□□ -0.61
VAMP8-202ENST00000409760 ADCYAP1R1P41586 468 aa11.22□□□□□ -0.61
VAMP8-202ENST00000409760 NEDD4P46934 1319 aa11.22□□□□□ -0.61
VAMP8-202ENST00000409760 CCDC96Q2M329 555 aa11.22□□□□□ -0.61
VAMP8-202ENST00000409760 TRIM60Q495X7 471 aa11.22□□□□□ -0.61
VAMP8-202ENST00000409760 BTNL9Q6UXG8 535 aa11.22□□□□□ -0.61
VAMP8-202ENST00000409760 SH3RF1Q7Z6J0 888 aa11.22□□□□□ -0.61
VAMP8-202ENST00000409760 TRIM43Q96BQ3 446 aaPredicted RBP11.22□□□□□ -0.61
VAMP8-202ENST00000409760 LENG1Q96BZ8 264 aaPredicted RBP11.22□□□□□ -0.61
VAMP8-202ENST00000409760 IL25Q9H293 177 aa11.22□□□□□ -0.61
VAMP8-202ENST00000409760 PDLIM7Q9NR12 457 aa11.22□□□□□ -0.61
VAMP8-202ENST00000409760 ZSWIM5Q9P217 1185 aa11.22□□□□□ -0.61
VAMP8-202ENST00000409760 PLXNA1Q9UIW2 1896 aa11.22□□□□□ -0.61
VAMP8-202ENST00000409760 PHF24Q9UPV7 400 aa11.22□□□□□ -0.61
VAMP8-202ENST00000409760 ATP11BQ9Y2G3 1177 aa11.22□□□□□ -0.61
VAMP8-202ENST00000409760 TNKSO95271 1327 aa11.21□□□□□ -0.61
VAMP8-202ENST00000409760 B4E1Z4 1266 aa11.21□□□□□ -0.61
VAMP8-202ENST00000409760 KBTBD13C9JR72 458 aa11.21□□□□□ -0.61
VAMP8-202ENST00000409760 EIF5BO60841 1220 aaKnown RBP11.21□□□□□ -0.61
VAMP8-202ENST00000409760 ADAMTS4O75173 837 aa11.21□□□□□ -0.61
VAMP8-202ENST00000409760 SNAI1O95863 264 aaPredicted RBP11.21□□□□□ -0.61
VAMP8-202ENST00000409760 CYP21A2P08686 494 aa11.21□□□□□ -0.61
VAMP8-202ENST00000409760 SNHG28P0DPA3 235 aa11.21□□□□□ -0.61
VAMP8-202ENST00000409760 ITGB8P26012 769 aa11.21□□□□□ -0.61
VAMP8-202ENST00000409760 PTH1RQ03431 593 aa11.21□□□□□ -0.61
VAMP8-202ENST00000409760 IFIT1BQ5T764 474 aaKnown RBP11.21□□□□□ -0.61
VAMP8-202ENST00000409760 FAM109BQ6ICB4 259 aaPredicted RBP11.21□□□□□ -0.61
VAMP8-202ENST00000409760 SNRNP48Q6IEG0 339 aaKnown RBP11.21□□□□□ -0.61
VAMP8-202ENST00000409760 MSL3Q8N5Y2 521 aaKnown RBP11.21□□□□□ -0.61
VAMP8-202ENST00000409760 PNMA1Q8ND90 353 aa11.21□□□□□ -0.61
VAMP8-202ENST00000409760 MAF1Q9H063 256 aa11.21□□□□□ -0.61
VAMP8-202ENST00000409760 ANO2Q9NQ90 1003 aa11.21□□□□□ -0.61
VAMP8-202ENST00000409760 XPNPEP3Q9NQH7 507 aa11.21□□□□□ -0.61
VAMP8-202ENST00000409760 TSHZ2Q9NRE2 1034 aa11.21□□□□□ -0.61
VAMP8-202ENST00000409760 STXBP5LQ9Y2K9 1186 aa11.21□□□□□ -0.61
VAMP8-202ENST00000409760 RBM8AQ9Y5S9 174 aaKnown RBP11.21□□□□□ -0.61
VAMP8-202ENST00000409760 SMCHD1A6NHR9 2005 aa11.21□□□□□ -0.62
VAMP8-202ENST00000409760 E7EWF7 191 aa11.2□□□□□ -0.62
VAMP8-202ENST00000409760 ADCY6O43306 1168 aa11.2□□□□□ -0.62
VAMP8-202ENST00000409760 EPB41L2O43491 1005 aaKnown RBP11.2□□□□□ -0.62
VAMP8-202ENST00000409760 PGK1P00558 417 aa11.2□□□□□ -0.62
VAMP8-202ENST00000409760 PDHBP11177 359 aa11.2□□□□□ -0.62
VAMP8-202ENST00000409760 ZNF543Q08ER8 600 aa11.2□□□□□ -0.62
VAMP8-202ENST00000409760 ASPRV1Q53RT3 343 aa11.2□□□□□ -0.62
VAMP8-202ENST00000409760 C9orf50Q5SZB4 431 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms