RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 DDX11Q96FC9 970 aa15.12■□□□□ 0.01
CHRNA1-205ENST00000409542 HAUS7Q99871 368 aa15.12■□□□□ 0.01
CHRNA1-205ENST00000409542 TEX13BQ9BXU2 312 aa15.12■□□□□ 0.01
CHRNA1-205ENST00000409542 PPP1R12CQ9BZL4 782 aa15.12■□□□□ 0.01
CHRNA1-205ENST00000409542 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.12■□□□□ 0.01
CHRNA1-205ENST00000409542 MYO9BQ13459 2157 aa15.12■□□□□ 0.01
CHRNA1-205ENST00000409542 F5H6K3 240 aa15.11■□□□□ 0.01
CHRNA1-205ENST00000409542 TNFRSF10AO00220 468 aa15.11■□□□□ 0.01
CHRNA1-205ENST00000409542 CTAGE5O15320 804 aa15.11■□□□□ 0.01
CHRNA1-205ENST00000409542 NDUFB10O96000 172 aa15.11■□□□□ 0.01
CHRNA1-205ENST00000409542 C6orf222P0C671 652 aaPredicted RBP15.11■□□□□ 0.01
CHRNA1-205ENST00000409542 COL9A1P20849 921 aa15.11■□□□□ 0.01
CHRNA1-205ENST00000409542 CST5P28325 142 aaPredicted RBP15.11■□□□□ 0.01
CHRNA1-205ENST00000409542 COPB2P35606 906 aa15.11■□□□□ 0.01
CHRNA1-205ENST00000409542 KLRC3Q07444 240 aa15.11■□□□□ 0.01
CHRNA1-205ENST00000409542 ADGRE1Q14246 886 aa15.11■□□□□ 0.01
CHRNA1-205ENST00000409542 UBE3CQ15386 1083 aa15.11■□□□□ 0.01
CHRNA1-205ENST00000409542 ZNF365Q70YC5 407 aa15.11■□□□□ 0.01
CHRNA1-205ENST00000409542 MSL3Q8N5Y2 521 aaKnown RBP15.11■□□□□ 0.01
CHRNA1-205ENST00000409542 RAVER2Q9HCJ3 691 aaKnown RBP15.11■□□□□ 0.01
CHRNA1-205ENST00000409542 MYH7P12883 1935 aa15.11■□□□□ 0.01
CHRNA1-205ENST00000409542 ELP1O95163 1332 aa15.11■□□□□ 0.01
CHRNA1-205ENST00000409542 ARVCFO00192 962 aa15.1■□□□□ 0.01
CHRNA1-205ENST00000409542 PTGS1P23219 599 aa15.1■□□□□ 0.01
CHRNA1-205ENST00000409542 PPIGQ13427 754 aaKnown RBP eCLIP15.1■□□□□ 0.01
CHRNA1-205ENST00000409542 CCDC144BQ3MJ40 725 aa15.1■□□□□ 0.01
CHRNA1-205ENST00000409542 CCDC129Q6ZRS4 1044 aa15.1■□□□□ 0.01
CHRNA1-205ENST00000409542 VTI1AQ96AJ9 217 aa15.1■□□□□ 0.01
CHRNA1-205ENST00000409542 KATNBL1Q9H079 304 aa15.1■□□□□ 0.01
CHRNA1-205ENST00000409542 UPF3AQ9H1J1 476 aaKnown RBP15.1■□□□□ 0.01
CHRNA1-205ENST00000409542 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.09■□□□□ 0.01
CHRNA1-205ENST00000409542 CYP2C18P33260 490 aa15.09■□□□□ 0.01
CHRNA1-205ENST00000409542 GJA9P57773 515 aa15.09■□□□□ 0.01
CHRNA1-205ENST00000409542 BEX3Q00994 111 aa15.09■□□□□ 0.01
CHRNA1-205ENST00000409542 BMP2KLQ5H9B9 411 aa15.09■□□□□ 0.01
CHRNA1-205ENST00000409542 FAM126BQ8IXS8 530 aa15.09■□□□□ 0.01
CHRNA1-205ENST00000409542 RPAP2Q8IXW5 612 aaPredicted RBP15.09■□□□□ 0.01
CHRNA1-205ENST00000409542 AMOTL1Q8IY63 956 aa15.09■□□□□ 0.01
CHRNA1-205ENST00000409542 GLT1D1Q96MS3 346 aa15.09■□□□□ 0.01
CHRNA1-205ENST00000409542 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.09■□□□□ 0.01
CHRNA1-205ENST00000409542 CXXC1Q9P0U4 656 aaPredicted RBP15.09■□□□□ 0.01
CHRNA1-205ENST00000409542 NYAP2Q9P242 653 aa15.09■□□□□ 0.01
CHRNA1-205ENST00000409542 DDX49Q9Y6V7 483 aaKnown RBP15.09■□□□□ 0.01
CHRNA1-205ENST00000409542 UMODL1Q5DID0 1318 aa15.09■□□□□ 0.01
CHRNA1-205ENST00000409542 IGKV6D-41A0A0C4DH26 115 aa15.08■□□□□ 0.01
CHRNA1-205ENST00000409542 A0A0U1RQG5 324 aaPredicted RBP15.08■□□□□ 0.01
CHRNA1-205ENST00000409542 GSG1L2A8MUP6 293 aa15.08■□□□□ 0.01
CHRNA1-205ENST00000409542 ATP2A1O14983 1001 aa15.08■□□□□ 0.01
CHRNA1-205ENST00000409542 CCDC85BQ15834 202 aaPredicted RBP15.08■□□□□ 0.01
CHRNA1-205ENST00000409542 GNASQ5JWF2 1037 aa15.08■□□□□ 0.01
CHRNA1-205ENST00000409542 ARMCX2Q7L311 632 aa15.08■□□□□ 0.01
CHRNA1-205ENST00000409542 ZNF467Q7Z7K2 595 aaPredicted RBP15.08■□□□□ 0.01
CHRNA1-205ENST00000409542 PRPF38AQ8NAV1 312 aaKnown RBP15.08■□□□□ 0.01
CHRNA1-205ENST00000409542 KIFC2Q96AC6 838 aa15.08■□□□□ 0.01
CHRNA1-205ENST00000409542 STRBPQ96SI9 672 aaKnown RBP15.08■□□□□ 0.01
CHRNA1-205ENST00000409542 LNPKQ9C0E8 428 aa15.08■□□□□ 0.01
CHRNA1-205ENST00000409542 CLIP2Q9UDT6 1046 aa15.08■□□□□ 0.01
CHRNA1-205ENST00000409542 GBF1Q92538 1859 aa15.08■□□□□ 0.01
CHRNA1-205ENST00000409542 ASTN1O14525 1302 aa15.08■□□□□ 0
CHRNA1-205ENST00000409542 RAB11FIP3O75154 756 aa15.08■□□□□ 0
CHRNA1-205ENST00000409542 CD4P01730 458 aa15.08■□□□□ 0
CHRNA1-205ENST00000409542 CNTN2Q02246 1040 aa15.08■□□□□ 0
CHRNA1-205ENST00000409542 SBK1Q52WX2 424 aa15.08■□□□□ 0
CHRNA1-205ENST00000409542 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.08■□□□□ 0
CHRNA1-205ENST00000409542 CCDC144CPQ8IYA2 1237 aa15.08■□□□□ 0
CHRNA1-205ENST00000409542 PCSK9Q8NBP7 692 aaKnown RBP15.08■□□□□ 0
CHRNA1-205ENST00000409542 GAS2L1Q99501 681 aaPredicted RBP15.08■□□□□ 0
CHRNA1-205ENST00000409542 NKX2-4Q9H2Z4 354 aa15.08■□□□□ 0
CHRNA1-205ENST00000409542 ABHD16BQ9H3Z7 469 aa15.08■□□□□ 0
CHRNA1-205ENST00000409542 SLC38A10Q9HBR0 1119 aa15.08■□□□□ 0
CHRNA1-205ENST00000409542 ARPP21Q9UBL0 812 aaPredicted RBP15.08■□□□□ 0
CHRNA1-205ENST00000409542 YBX2Q9Y2T7 364 aaKnown RBP15.08■□□□□ 0
CHRNA1-205ENST00000409542 MYH4Q9Y623 1939 aa15.07■□□□□ 0
CHRNA1-205ENST00000409542 MROH7Q68CQ1 1323 aa15.07■□□□□ 0
CHRNA1-205ENST00000409542 MINDY4BA8MYZ0 360 aa15.07■□□□□ 0
CHRNA1-205ENST00000409542 SMARCA5O60264 1052 aaPredicted RBP15.07■□□□□ 0
CHRNA1-205ENST00000409542 ZBED4O75132 1171 aa15.07■□□□□ 0
CHRNA1-205ENST00000409542 NFKBIBQ15653 356 aa15.07■□□□□ 0
CHRNA1-205ENST00000409542 AKNAD1Q5T1N1 836 aa15.07■□□□□ 0
CHRNA1-205ENST00000409542 ANKRD35Q8N283 1001 aa15.07■□□□□ 0
CHRNA1-205ENST00000409542 TMEM199Q8N511 208 aa15.07■□□□□ 0
CHRNA1-205ENST00000409542 ASB2Q96Q27 587 aa15.07■□□□□ 0
CHRNA1-205ENST00000409542 MKNK2Q9HBH9 465 aa15.07■□□□□ 0
CHRNA1-205ENST00000409542 IL23AQ9NPF7 189 aa15.07■□□□□ 0
CHRNA1-205ENST00000409542 GRIN2DO15399 1336 aa15.06■□□□□ 0
CHRNA1-205ENST00000409542 XIRP2A4UGR9 3374 aa15.06■□□□□ 0
CHRNA1-205ENST00000409542 PRDM1O75626 825 aa15.06■□□□□ 0
CHRNA1-205ENST00000409542 NKX3-2P78367 333 aa15.06■□□□□ 0
CHRNA1-205ENST00000409542 TMEM63BQ5T3F8 832 aa15.06■□□□□ 0
CHRNA1-205ENST00000409542 ANKRD45Q5TZF3 282 aa15.06■□□□□ 0
CHRNA1-205ENST00000409542 SLC43A3Q8NBI5 491 aa15.06■□□□□ 0
CHRNA1-205ENST00000409542 ATXN2LQ8WWM7 1075 aaKnown RBP15.06■□□□□ 0
CHRNA1-205ENST00000409542 HERVK_113Q902F9 699 aa15.06■□□□□ 0
CHRNA1-205ENST00000409542 OSBP2Q969R2 916 aa15.06■□□□□ 0
CHRNA1-205ENST00000409542 VWCEQ96DN2 955 aa15.06■□□□□ 0
CHRNA1-205ENST00000409542 C22orf23Q9BZE7 217 aa15.06■□□□□ 0
CHRNA1-205ENST00000409542 EPB41L4AQ9HCS5 686 aaPredicted RBP15.06■□□□□ 0
CHRNA1-205ENST00000409542 HOMER2Q9NSB8 354 aa15.06■□□□□ 0
CHRNA1-205ENST00000409542 SOWAHBA6NEL2 793 aa15.05■□□□□ -0
CHRNA1-205ENST00000409542 HMMRO75330 724 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms