RNA–Protein interactions for RNA: ENST00000409486.6

PPM1B-207, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

TSL 1 (best)

Gene PPM1B, Length 1,481 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-207ENST00000409486 FLRT1Q9NZU1 646 aa22.31■■□□□ 1.16
PPM1B-207ENST00000409486 CCDC69A6NI79 296 aa22.3■■□□□ 1.16
PPM1B-207ENST00000409486 COBLO75128 1261 aa22.3■■□□□ 1.16
PPM1B-207ENST00000409486 HMGCRP04035 888 aa22.3■■□□□ 1.16
PPM1B-207ENST00000409486 SNHG28P0DPA3 235 aa22.3■■□□□ 1.16
PPM1B-207ENST00000409486 USH1GQ495M9 461 aa22.3■■□□□ 1.16
PPM1B-207ENST00000409486 ASPRV1Q53RT3 343 aa22.3■■□□□ 1.16
PPM1B-207ENST00000409486 GPATCH4Q5T3I0 446 aaKnown RBP22.3■■□□□ 1.16
PPM1B-207ENST00000409486 ANKRD35Q8N283 1001 aa22.3■■□□□ 1.16
PPM1B-207ENST00000409486 IGDCC4Q8TDY8 1250 aa22.3■■□□□ 1.16
PPM1B-207ENST00000409486 PXYLP1Q8TE99 480 aa22.3■■□□□ 1.16
PPM1B-207ENST00000409486 DDX11Q96FC9 970 aa22.3■■□□□ 1.16
PPM1B-207ENST00000409486 LY9Q9HBG7 655 aa22.3■■□□□ 1.16
PPM1B-207ENST00000409486 ZNF536O15090 1300 aa22.3■■□□□ 1.16
PPM1B-207ENST00000409486 SH2B2O14492 632 aaPredicted RBP22.29■■□□□ 1.16
PPM1B-207ENST00000409486 FGD1P98174 961 aa22.29■■□□□ 1.16
PPM1B-207ENST00000409486 USP6NLQ92738 828 aa22.29■■□□□ 1.16
PPM1B-207ENST00000409486 TRERF1Q96PN7 1200 aa22.29■■□□□ 1.16
PPM1B-207ENST00000409486 SNX14Q9Y5W7 946 aa22.29■■□□□ 1.16
PPM1B-207ENST00000409486 PLXNA1Q9UIW2 1896 aa22.29■■□□□ 1.16
PPM1B-207ENST00000409486 SMCHD1A6NHR9 2005 aa22.29■■□□□ 1.16
PPM1B-207ENST00000409486 STRNO43815 780 aa22.28■■□□□ 1.16
PPM1B-207ENST00000409486 PLA2G6O60733 806 aa22.28■■□□□ 1.16
PPM1B-207ENST00000409486 PRKAR2AP13861 404 aaKnown RBP22.28■■□□□ 1.16
PPM1B-207ENST00000409486 HSPA4P34932 840 aa22.28■■□□□ 1.16
PPM1B-207ENST00000409486 COPB2P35606 906 aa22.28■■□□□ 1.16
PPM1B-207ENST00000409486 ADGRF4Q8IZF3 695 aa22.28■■□□□ 1.16
PPM1B-207ENST00000409486 RANBP17Q9H2T7 1088 aaKnown RBP22.28■■□□□ 1.16
PPM1B-207ENST00000409486 MYH6P13533 1939 aa22.28■■□□□ 1.16
PPM1B-207ENST00000409486 EN2P19622 333 aaPredicted RBP22.28■■□□□ 1.16
PPM1B-207ENST00000409486 CYP2C19P33261 490 aa22.28■■□□□ 1.16
PPM1B-207ENST00000409486 KRT32Q14532 448 aa22.28■■□□□ 1.16
PPM1B-207ENST00000409486 CDC37Q16543 378 aaPredicted RBP22.28■■□□□ 1.16
PPM1B-207ENST00000409486 MUM1L1Q5H9M0 696 aa22.28■■□□□ 1.16
PPM1B-207ENST00000409486 BTNL9Q6UXG8 535 aa22.28■■□□□ 1.16
PPM1B-207ENST00000409486 NSMFQ6X4W1 530 aa22.28■■□□□ 1.16
PPM1B-207ENST00000409486 HOMER1Q86YM7 354 aa22.28■■□□□ 1.16
PPM1B-207ENST00000409486 ZNF654Q8IZM8 581 aa22.28■■□□□ 1.16
PPM1B-207ENST00000409486 KLRF2D3W0D1 207 aa22.27■■□□□ 1.16
PPM1B-207ENST00000409486 FDX1P10109 184 aa22.27■■□□□ 1.16
PPM1B-207ENST00000409486 CNGA1P29973 690 aa22.27■■□□□ 1.16
PPM1B-207ENST00000409486 OAZ1P54368 228 aa22.27■■□□□ 1.16
PPM1B-207ENST00000409486 MFSD14CQ5VZR4 134 aa22.27■■□□□ 1.16
PPM1B-207ENST00000409486 TMEM87BQ96K49 555 aa22.27■■□□□ 1.16
PPM1B-207ENST00000409486 ACAD9Q9H845 621 aa22.27■■□□□ 1.16
PPM1B-207ENST00000409486 SLC5A4Q9NY91 659 aa22.27■■□□□ 1.16
PPM1B-207ENST00000409486 MAD2L2Q9UI95 211 aa22.27■■□□□ 1.16
PPM1B-207ENST00000409486 ZNF236Q9UL36 1845 aa22.27■■□□□ 1.15
PPM1B-207ENST00000409486 ATP2A1O14983 1001 aa22.26■■□□□ 1.15
PPM1B-207ENST00000409486 ICAM1P05362 532 aa22.26■■□□□ 1.15
PPM1B-207ENST00000409486 XRCC5P13010 732 aaKnown RBP22.26■■□□□ 1.15
PPM1B-207ENST00000409486 GRM4Q14833 912 aa22.26■■□□□ 1.15
PPM1B-207ENST00000409486 DEFB118Q96PH6 123 aa22.26■■□□□ 1.15
PPM1B-207ENST00000409486 CASTP20810 708 aaKnown RBP22.25■■□□□ 1.15
PPM1B-207ENST00000409486 CCND3P30281 292 aaPredicted RBP22.25■■□□□ 1.15
PPM1B-207ENST00000409486 CACNB2Q08289 660 aaPredicted RBP22.25■■□□□ 1.15
PPM1B-207ENST00000409486 BLOC1S2Q6QNY1 142 aa22.25■■□□□ 1.15
PPM1B-207ENST00000409486 DHX32Q7L7V1 743 aaKnown RBP22.25■■□□□ 1.15
PPM1B-207ENST00000409486 MICU3Q86XE3 530 aa22.25■■□□□ 1.15
PPM1B-207ENST00000409486 CHST13Q8NET6 341 aa22.25■■□□□ 1.15
PPM1B-207ENST00000409486 CTCFLQ8NI51 663 aaPredicted RBP22.25■■□□□ 1.15
PPM1B-207ENST00000409486 USP26Q9BXU7 913 aa22.25■■□□□ 1.15
PPM1B-207ENST00000409486 FBXO40Q9UH90 709 aa22.25■■□□□ 1.15
PPM1B-207ENST00000409486 PRAMEF19Q5SWL8 479 aa22.24■■□□□ 1.15
PPM1B-207ENST00000409486 TRMT44Q8IYL2 757 aaKnown RBP22.24■■□□□ 1.15
PPM1B-207ENST00000409486 ABRAQ8N0Z2 381 aa22.24■■□□□ 1.15
PPM1B-207ENST00000409486 CMTR1Q8N1G2 835 aaKnown RBP22.24■■□□□ 1.15
PPM1B-207ENST00000409486 MAML3Q96JK9 1138 aa22.24■■□□□ 1.15
PPM1B-207ENST00000409486 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.24■■□□□ 1.151e-7■■■□□ 17.2
PPM1B-207ENST00000409486 HMX1Q9NP08 348 aaPredicted RBP22.24■■□□□ 1.15
PPM1B-207ENST00000409486 GTF3C3Q9Y5Q9 886 aa22.24■■□□□ 1.15
PPM1B-207ENST00000409486 SLC12A7Q9Y666 1083 aa22.24■■□□□ 1.15
PPM1B-207ENST00000409486 PTPDC1A2A3K4 754 aa22.23■■□□□ 1.15
PPM1B-207ENST00000409486 QRICH1Q2TAL8 776 aa22.23■■□□□ 1.15
PPM1B-207ENST00000409486 JMJD4Q9H9V9 463 aa22.23■■□□□ 1.15
PPM1B-207ENST00000409486 BAZ2BQ9UIF8 2168 aaKnown RBP22.22■■□□□ 1.15
PPM1B-207ENST00000409486 PALM3A6NDB9 673 aaPredicted RBP22.22■■□□□ 1.15
PPM1B-207ENST00000409486 NFIBO00712 420 aa22.22■■□□□ 1.15
PPM1B-207ENST00000409486 CNTN2Q02246 1040 aa22.22■■□□□ 1.15
PPM1B-207ENST00000409486 TROAPQ12815 778 aa22.22■■□□□ 1.15
PPM1B-207ENST00000409486 ANO1Q5XXA6 986 aa22.22■■□□□ 1.15
PPM1B-207ENST00000409486 SYNE3Q6ZMZ3 975 aa22.22■■□□□ 1.15
PPM1B-207ENST00000409486 Q6ZUG5 572 aa22.22■■□□□ 1.15
PPM1B-207ENST00000409486 CCDC82Q8N4S0 544 aa22.22■■□□□ 1.15
PPM1B-207ENST00000409486 PURBQ96QR8 312 aaKnown RBP22.22■■□□□ 1.15
PPM1B-207ENST00000409486 A1CFQ9NQ94 594 aaKnown RBP22.22■■□□□ 1.15
PPM1B-207ENST00000409486 POTEB2H3BUK9 544 aa22.22■■□□□ 1.15
PPM1B-207ENST00000409486 DDAH1O94760 285 aa22.22■■□□□ 1.15
PPM1B-207ENST00000409486 TFRCP02786 760 aaKnown RBP22.22■■□□□ 1.15
PPM1B-207ENST00000409486 MYCNP04198 464 aaPredicted RBP22.22■■□□□ 1.15
PPM1B-207ENST00000409486 CALML3P27482 149 aa22.22■■□□□ 1.15
PPM1B-207ENST00000409486 EXOSC10Q01780 885 aaKnown RBP22.22■■□□□ 1.15
PPM1B-207ENST00000409486 ZNF792Q3KQV3 632 aa22.22■■□□□ 1.15
PPM1B-207ENST00000409486 TKFCQ3LXA3 575 aa22.22■■□□□ 1.15
PPM1B-207ENST00000409486 TSGA10IPQ3SY00 556 aa22.22■■□□□ 1.15
PPM1B-207ENST00000409486 DDX49Q9Y6V7 483 aaKnown RBP22.22■■□□□ 1.15
PPM1B-207ENST00000409486 RPTORQ8N122 1335 aa22.21■■□□□ 1.15
PPM1B-207ENST00000409486 KLF18A0A0U1RQI7 1052 aa22.21■■□□□ 1.15
PPM1B-207ENST00000409486 PLEKHA8P1O95397 391 aa22.21■■□□□ 1.15
PPM1B-207ENST00000409486 SEC24BO95487 1268 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms