RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 DDAH1O94760 285 aa23.15■■□□□ 1.3
PDLIM2-207ENST00000409417 ELNP15502 786 aa23.15■■□□□ 1.3
PDLIM2-207ENST00000409417 ADORA2AP29274 412 aa23.15■■□□□ 1.3
PDLIM2-207ENST00000409417 SLC4A3P48751 1232 aa23.15■■□□□ 1.3
PDLIM2-207ENST00000409417 SGMS1Q86VZ5 419 aa23.15■■□□□ 1.3
PDLIM2-207ENST00000409417 STAG2Q8N3U4 1231 aa23.15■■□□□ 1.3
PDLIM2-207ENST00000409417 CHST13Q8NET6 341 aa23.15■■□□□ 1.3
PDLIM2-207ENST00000409417 MAP3K14Q99558 947 aa23.15■■□□□ 1.3
PDLIM2-207ENST00000409417 CPVLQ9H3G5 476 aa23.15■■□□□ 1.3
PDLIM2-207ENST00000409417 FBXO40Q9UH90 709 aa23.15■■□□□ 1.3
PDLIM2-207ENST00000409417 PNMA2Q9UL42 364 aa23.15■■□□□ 1.3
PDLIM2-207ENST00000409417 CCDC85CA6NKD9 419 aa23.14■■□□□ 1.29
PDLIM2-207ENST00000409417 KLRF2D3W0D1 207 aa23.14■■□□□ 1.29
PDLIM2-207ENST00000409417 KCTD2Q14681 263 aa23.14■■□□□ 1.29
PDLIM2-207ENST00000409417 TKFCQ3LXA3 575 aa23.14■■□□□ 1.29
PDLIM2-207ENST00000409417 BLOC1S2Q6QNY1 142 aa23.14■■□□□ 1.29
PDLIM2-207ENST00000409417 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.14■■□□□ 1.295e-6■■■□□ 17.2
PDLIM2-207ENST00000409417 TRMT44Q8IYL2 757 aaKnown RBP23.14■■□□□ 1.29
PDLIM2-207ENST00000409417 ADGRF4Q8IZF3 695 aa23.14■■□□□ 1.29
PDLIM2-207ENST00000409417 TCEANC2Q96MN5 208 aa23.14■■□□□ 1.29
PDLIM2-207ENST00000409417 MMP19Q99542 508 aa23.14■■□□□ 1.29
PDLIM2-207ENST00000409417 BIN2Q9UBW5 565 aaPredicted RBP23.14■■□□□ 1.29
PDLIM2-207ENST00000409417 PLXNB2O15031 1838 aa23.14■■□□□ 1.29
PDLIM2-207ENST00000409417 DPP9Q86TI2 863 aa23.13■■□□□ 1.29
PDLIM2-207ENST00000409417 NUP133Q8WUM0 1156 aa23.13■■□□□ 1.29
PDLIM2-207ENST00000409417 CCPG1Q9ULG6 757 aa23.13■■□□□ 1.29
PDLIM2-207ENST00000409417 SLC12A7Q9Y666 1083 aa23.13■■□□□ 1.29
PDLIM2-207ENST00000409417 MYL10Q9BUA6 226 aa23.12■■□□□ 1.29
PDLIM2-207ENST00000409417 HOMER2Q9NSB8 354 aa23.12■■□□□ 1.29
PDLIM2-207ENST00000409417 SLC5A4Q9NY91 659 aa23.12■■□□□ 1.29
PDLIM2-207ENST00000409417 COBLO75128 1261 aa23.11■■□□□ 1.29
PDLIM2-207ENST00000409417 HMGCRP04035 888 aa23.11■■□□□ 1.29
PDLIM2-207ENST00000409417 CALM1P0DP23 149 aa23.11■■□□□ 1.29
PDLIM2-207ENST00000409417 CALM2P0DP24 149 aa23.11■■□□□ 1.29
PDLIM2-207ENST00000409417 CALM3P0DP25 149 aa23.11■■□□□ 1.29
PDLIM2-207ENST00000409417 CPA1P15085 419 aa23.11■■□□□ 1.29
PDLIM2-207ENST00000409417 CASTP20810 708 aaKnown RBP23.11■■□□□ 1.29
PDLIM2-207ENST00000409417 RPS6KB1P23443 525 aa23.11■■□□□ 1.29
PDLIM2-207ENST00000409417 KIF5BP33176 963 aa23.11■■□□□ 1.29
PDLIM2-207ENST00000409417 C8orf34Q49A92 452 aa23.11■■□□□ 1.29
PDLIM2-207ENST00000409417 CTCFLQ8NI51 663 aaPredicted RBP23.11■■□□□ 1.29
PDLIM2-207ENST00000409417 TRIB2Q92519 343 aa23.11■■□□□ 1.29
PDLIM2-207ENST00000409417 TRERF1Q96PN7 1200 aa23.11■■□□□ 1.29
PDLIM2-207ENST00000409417 ACAD9Q9H845 621 aa23.11■■□□□ 1.29
PDLIM2-207ENST00000409417 JMJD4Q9H9V9 463 aa23.11■■□□□ 1.29
PDLIM2-207ENST00000409417 RNF146Q9NTX7 359 aa23.11■■□□□ 1.29
PDLIM2-207ENST00000409417 DHX16O60231 1041 aaKnown RBP23.11■■□□□ 1.29
PDLIM2-207ENST00000409417 SEC24BO95487 1268 aa23.11■■□□□ 1.29
PDLIM2-207ENST00000409417 INHAP05111 366 aa23.11■■□□□ 1.29
PDLIM2-207ENST00000409417 ALAS1P13196 640 aa23.11■■□□□ 1.29
PDLIM2-207ENST00000409417 UBXN2AP68543 259 aa23.11■■□□□ 1.29
PDLIM2-207ENST00000409417 FGD1P98174 961 aa23.11■■□□□ 1.29
PDLIM2-207ENST00000409417 FBXL16Q8N461 479 aa23.11■■□□□ 1.29
PDLIM2-207ENST00000409417 TM6SF1Q9BZW5 370 aa23.11■■□□□ 1.29
PDLIM2-207ENST00000409417 ZSWIM6Q9HCJ5 1215 aa23.11■■□□□ 1.29
PDLIM2-207ENST00000409417 KIAA0100Q14667 2235 aaKnown RBP23.1■■□□□ 1.29
PDLIM2-207ENST00000409417 CDC37Q16543 378 aaPredicted RBP23.1■■□□□ 1.29
PDLIM2-207ENST00000409417 CCL14Q16627 93 aa23.1■■□□□ 1.29
PDLIM2-207ENST00000409417 SYNE3Q6ZMZ3 975 aa23.1■■□□□ 1.29
PDLIM2-207ENST00000409417 NPLOC4Q8TAT6 608 aa23.1■■□□□ 1.29
PDLIM2-207ENST00000409417 VAT1LQ9HCJ6 419 aa23.1■■□□□ 1.29
PDLIM2-207ENST00000409417 ZNF236Q9UL36 1845 aa23.09■■□□□ 1.29
PDLIM2-207ENST00000409417 PGK2P07205 417 aa23.09■■□□□ 1.29
PDLIM2-207ENST00000409417 ANAPC15P60006 121 aa23.09■■□□□ 1.29
PDLIM2-207ENST00000409417 APOA5Q6Q788 366 aa23.09■■□□□ 1.29
PDLIM2-207ENST00000409417 RUFY3Q7L099 469 aa23.09■■□□□ 1.29
PDLIM2-207ENST00000409417 ANKRD35Q8N283 1001 aa23.09■■□□□ 1.29
PDLIM2-207ENST00000409417 MTMR8Q96EF0 704 aa23.09■■□□□ 1.29
PDLIM2-207ENST00000409417 DDX11Q96FC9 970 aa23.09■■□□□ 1.29
PDLIM2-207ENST00000409417 LZTS2Q9BRK4 669 aa23.09■■□□□ 1.29
PDLIM2-207ENST00000409417 RIOX1Q9H6W3 641 aa23.09■■□□□ 1.29
PDLIM2-207ENST00000409417 SLC35G1Q2M3R5 365 aa23.08■■□□□ 1.29
PDLIM2-207ENST00000409417 OLFML2BQ68BL8 750 aa23.08■■□□□ 1.29
PDLIM2-207ENST00000409417 Q6ZUG5 572 aa23.08■■□□□ 1.29
PDLIM2-207ENST00000409417 FANCBQ8NB91 859 aa23.08■■□□□ 1.29
PDLIM2-207ENST00000409417 FLRT1Q9NZU1 646 aa23.08■■□□□ 1.29
PDLIM2-207ENST00000409417 BRPF3Q9ULD4 1205 aa23.08■■□□□ 1.29
PDLIM2-207ENST00000409417 DIS3Q9Y2L1 958 aaKnown RBP23.08■■□□□ 1.29
PDLIM2-207ENST00000409417 CYP46A1Q9Y6A2 500 aa23.08■■□□□ 1.29
PDLIM2-207ENST00000409417 DNAJC25-GNG10A0A024R161 153 aa23.07■■□□□ 1.28
PDLIM2-207ENST00000409417 MYCP01106 439 aaPredicted RBP23.07■■□□□ 1.28
PDLIM2-207ENST00000409417 IGHA2P01877 340 aa23.07■■□□□ 1.28
PDLIM2-207ENST00000409417 SMARCA1P28370 1054 aa23.07■■□□□ 1.28
PDLIM2-207ENST00000409417 GNAQP50148 359 aa23.07■■□□□ 1.28
PDLIM2-207ENST00000409417 MTFR1Q15390 333 aa23.07■■□□□ 1.28
PDLIM2-207ENST00000409417 QRICH1Q2TAL8 776 aa23.07■■□□□ 1.28
PDLIM2-207ENST00000409417 ZNF792Q3KQV3 632 aa23.07■■□□□ 1.28
PDLIM2-207ENST00000409417 MUM1L1Q5H9M0 696 aa23.07■■□□□ 1.28
PDLIM2-207ENST00000409417 MICU3Q86XE3 530 aa23.07■■□□□ 1.28
PDLIM2-207ENST00000409417 AGXT2Q9BYV1 514 aa23.07■■□□□ 1.28
PDLIM2-207ENST00000409417 ZBTB5O15062 677 aa23.06■■□□□ 1.28
PDLIM2-207ENST00000409417 CYTH3O43739 400 aa23.06■■□□□ 1.28
PDLIM2-207ENST00000409417 TAL1P17542 331 aaPredicted RBP23.06■■□□□ 1.28
PDLIM2-207ENST00000409417 RXRAP19793 462 aa23.06■■□□□ 1.28
PDLIM2-207ENST00000409417 RCAN1P53805 252 aa23.06■■□□□ 1.28
PDLIM2-207ENST00000409417 MFSD14CQ5VZR4 134 aa23.06■■□□□ 1.28
PDLIM2-207ENST00000409417 TMEM106CQ9BVX2 250 aa23.06■■□□□ 1.28
PDLIM2-207ENST00000409417 A1CFQ9NQ94 594 aaKnown RBP23.06■■□□□ 1.28
PDLIM2-207ENST00000409417 PFASO15067 1338 aa23.06■■□□□ 1.28
PDLIM2-207ENST00000409417 KLF18A0A0U1RQI7 1052 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms