RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 GJC2Q5T442 439 aaPredicted RBP18.67■□□□□ 0.58
ATG4B-203ENST00000400772 CCDC174Q6PII3 467 aa18.67■□□□□ 0.58
ATG4B-203ENST00000400772 DGKHQ86XP1 1220 aa18.67■□□□□ 0.58
ATG4B-203ENST00000400772 C7orf61Q8IZ16 206 aa18.67■□□□□ 0.58
ATG4B-203ENST00000400772 ANKRD35Q8N283 1001 aa18.67■□□□□ 0.58
ATG4B-203ENST00000400772 MSL3Q8N5Y2 521 aaKnown RBP18.67■□□□□ 0.58
ATG4B-203ENST00000400772 PRO3102Q9H379 93 aa18.67■□□□□ 0.58
ATG4B-203ENST00000400772 CTNNA3Q9UI47 895 aa18.67■□□□□ 0.58
ATG4B-203ENST00000400772 CEP290O15078 2479 aa18.67■□□□□ 0.58
ATG4B-203ENST00000400772 SMCHD1A6NHR9 2005 aa18.67■□□□□ 0.58
ATG4B-203ENST00000400772 FRMPD2Q68DX3 1309 aaPredicted RBP18.67■□□□□ 0.58
ATG4B-203ENST00000400772 LAMA4Q16363 1823 aa18.67■□□□□ 0.58
ATG4B-203ENST00000400772 B4E1Z4 1266 aa18.66■□□□□ 0.58
ATG4B-203ENST00000400772 DNM1LO00429 736 aa18.66■□□□□ 0.58
ATG4B-203ENST00000400772 NT5C2P49902 561 aa18.66■□□□□ 0.58
ATG4B-203ENST00000400772 LRRC26Q2I0M4 334 aa18.66■□□□□ 0.58
ATG4B-203ENST00000400772 ZNF467Q7Z7K2 595 aaPredicted RBP18.66■□□□□ 0.58
ATG4B-203ENST00000400772 ANKS1AQ92625 1134 aa18.66■□□□□ 0.58
ATG4B-203ENST00000400772 TRERF1Q96PN7 1200 aa18.66■□□□□ 0.58
ATG4B-203ENST00000400772 SENP6Q9GZR1 1112 aaPredicted RBP18.66■□□□□ 0.58
ATG4B-203ENST00000400772 RANBP17Q9H2T7 1088 aaKnown RBP18.66■□□□□ 0.58
ATG4B-203ENST00000400772 ACAD9Q9H845 621 aa18.66■□□□□ 0.58
ATG4B-203ENST00000400772 GPCPD1Q9NPB8 672 aa18.66■□□□□ 0.58
ATG4B-203ENST00000400772 RNF146Q9NTX7 359 aa18.66■□□□□ 0.58
ATG4B-203ENST00000400772 ZSWIM5Q9P217 1185 aa18.66■□□□□ 0.58
ATG4B-203ENST00000400772 RAD50Q92878 1312 aa18.66■□□□□ 0.58
ATG4B-203ENST00000400772 SYNGAP1Q96PV0 1343 aa18.66■□□□□ 0.58
ATG4B-203ENST00000400772 PTH1RQ03431 593 aa18.65■□□□□ 0.58
ATG4B-203ENST00000400772 ZNF543Q08ER8 600 aa18.65■□□□□ 0.58
ATG4B-203ENST00000400772 TKFCQ3LXA3 575 aa18.65■□□□□ 0.58
ATG4B-203ENST00000400772 MUM1L1Q5H9M0 696 aa18.65■□□□□ 0.58
ATG4B-203ENST00000400772 SYDE2Q5VT97 1194 aa18.65■□□□□ 0.58
ATG4B-203ENST00000400772 ARRDC4Q8NCT1 418 aa18.65■□□□□ 0.58
ATG4B-203ENST00000400772 A1CFQ9NQ94 594 aaKnown RBP18.65■□□□□ 0.58
ATG4B-203ENST00000400772 RBM27Q9P2N5 1060 aaKnown RBP18.65■□□□□ 0.58
ATG4B-203ENST00000400772 ICAM1P05362 532 aa18.64■□□□□ 0.57
ATG4B-203ENST00000400772 ALAS1P13196 640 aa18.64■□□□□ 0.57
ATG4B-203ENST00000400772 CNTN2Q02246 1040 aa18.64■□□□□ 0.57
ATG4B-203ENST00000400772 LRRC41Q15345 812 aa18.64■□□□□ 0.57
ATG4B-203ENST00000400772 FAM133AQ8N9E0 248 aa18.64■□□□□ 0.57
ATG4B-203ENST00000400772 RUFY2Q8WXA3 655 aa18.64■□□□□ 0.57
ATG4B-203ENST00000400772 ZSCAN10Q96SZ4 725 aaPredicted RBP18.64■□□□□ 0.57
ATG4B-203ENST00000400772 ZMYND8Q9ULU4 1186 aaPredicted RBP18.64■□□□□ 0.57
ATG4B-203ENST00000400772 CNPY2Q9Y2B0 182 aa18.64■□□□□ 0.57
ATG4B-203ENST00000400772 SOWAHBA6NEL2 793 aa18.63■□□□□ 0.57
ATG4B-203ENST00000400772 SGSM2O43147 1006 aa18.63■□□□□ 0.57
ATG4B-203ENST00000400772 CCDC178Q5BJE1 867 aa18.63■□□□□ 0.57
ATG4B-203ENST00000400772 IQCA1Q86XH1 822 aa18.63■□□□□ 0.57
ATG4B-203ENST00000400772 ENAHQ8N8S7 591 aaPredicted RBP18.63■□□□□ 0.57
ATG4B-203ENST00000400772 LENG1Q96BZ8 264 aaPredicted RBP18.63■□□□□ 0.57
ATG4B-203ENST00000400772 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.63■□□□□ 0.57
ATG4B-203ENST00000400772 CCPG1Q9ULG6 757 aa18.63■□□□□ 0.57
ATG4B-203ENST00000400772 RARBP10826 455 aa18.62■□□□□ 0.57
ATG4B-203ENST00000400772 AKR1A1P14550 325 aa18.62■□□□□ 0.57
ATG4B-203ENST00000400772 SYN1P17600 705 aa18.62■□□□□ 0.57
ATG4B-203ENST00000400772 SKAP1Q86WV1 359 aa18.62■□□□□ 0.57
ATG4B-203ENST00000400772 KRT23Q9C075 422 aa18.62■□□□□ 0.57
ATG4B-203ENST00000400772 KATNBL1Q9H079 304 aa18.62■□□□□ 0.57
ATG4B-203ENST00000400772 PCDH10Q9P2E7 1040 aa18.62■□□□□ 0.57
ATG4B-203ENST00000400772 ASTN1O14525 1302 aa18.61■□□□□ 0.57
ATG4B-203ENST00000400772 TNKSO95271 1327 aa18.61■□□□□ 0.57
ATG4B-203ENST00000400772 POTEB2H3BUK9 544 aa18.61■□□□□ 0.57
ATG4B-203ENST00000400772 PGK1P00558 417 aa18.61■□□□□ 0.57
ATG4B-203ENST00000400772 CYP21A2P08686 494 aa18.61■□□□□ 0.57
ATG4B-203ENST00000400772 GOLGA8HP0CJ92 632 aa18.61■□□□□ 0.57
ATG4B-203ENST00000400772 FXR1P51114 621 aaKnown RBP eCLIP18.61■□□□□ 0.57
ATG4B-203ENST00000400772 ATN1P54259 1190 aaPredicted RBP18.61■□□□□ 0.57
ATG4B-203ENST00000400772 ACVR2BQ13705 512 aa18.61■□□□□ 0.57
ATG4B-203ENST00000400772 CYB5R4Q7L1T6 521 aa18.61■□□□□ 0.57
ATG4B-203ENST00000400772 ARMCX2Q7L311 632 aa18.61■□□□□ 0.57
ATG4B-203ENST00000400772 CCDC144CPQ8IYA2 1237 aa18.61■□□□□ 0.57
ATG4B-203ENST00000400772 PNMA1Q8ND90 353 aa18.61■□□□□ 0.57
ATG4B-203ENST00000400772 CNNM2Q9H8M5 875 aa18.61■□□□□ 0.57
ATG4B-203ENST00000400772 XPNPEP3Q9NQH7 507 aa18.61■□□□□ 0.57
ATG4B-203ENST00000400772 CYP39A1Q9NYL5 469 aa18.61■□□□□ 0.57
ATG4B-203ENST00000400772 ZHX1Q9UKY1 873 aaPredicted RBP18.61■□□□□ 0.57
ATG4B-203ENST00000400772 TAF6LQ9Y6J9 622 aa18.61■□□□□ 0.57
ATG4B-203ENST00000400772 RANBP2P49792 3224 aaKnown RBP18.61■□□□□ 0.57
ATG4B-203ENST00000400772 KBTBD13C9JR72 458 aa18.6■□□□□ 0.57
ATG4B-203ENST00000400772 MYCNP04198 464 aaPredicted RBP18.6■□□□□ 0.57
ATG4B-203ENST00000400772 PURBQ96QR8 312 aaKnown RBP18.6■□□□□ 0.57
ATG4B-203ENST00000400772 GDF15Q99988 308 aa18.6■□□□□ 0.57
ATG4B-203ENST00000400772 UBA5Q9GZZ9 404 aa18.6■□□□□ 0.57
ATG4B-203ENST00000400772 CPVLQ9H3G5 476 aa18.6■□□□□ 0.57
ATG4B-203ENST00000400772 KAT14Q9H8E8 782 aa18.6■□□□□ 0.57
ATG4B-203ENST00000400772 FAM184BQ9ULE4 1060 aa18.6■□□□□ 0.57
ATG4B-203ENST00000400772 MCM3APO60318 1980 aa18.59■□□□□ 0.57
ATG4B-203ENST00000400772 ADCY6O43306 1168 aa18.59■□□□□ 0.57
ATG4B-203ENST00000400772 ADAMTS4O75173 837 aa18.59■□□□□ 0.57
ATG4B-203ENST00000400772 ADCYAP1R1P41586 468 aa18.59■□□□□ 0.57
ATG4B-203ENST00000400772 SEC23AQ15436 765 aa18.59■□□□□ 0.57
ATG4B-203ENST00000400772 GPATCH4Q5T3I0 446 aaKnown RBP18.59■□□□□ 0.57
ATG4B-203ENST00000400772 SLC39A5Q6ZMH5 540 aa18.59■□□□□ 0.57
ATG4B-203ENST00000400772 CLEC4DQ8WXI8 215 aa18.59■□□□□ 0.57
ATG4B-203ENST00000400772 MAP4K1Q92918 833 aa18.59■□□□□ 0.57
ATG4B-203ENST00000400772 ABHD16BQ9H3Z7 469 aa18.59■□□□□ 0.57
ATG4B-203ENST00000400772 PHF24Q9UPV7 400 aa18.59■□□□□ 0.57
ATG4B-203ENST00000400772 DDX49Q9Y6V7 483 aaKnown RBP18.59■□□□□ 0.57
ATG4B-203ENST00000400772 U3KPZ7 1027 aaPredicted RBP18.59■□□□□ 0.57
ATG4B-203ENST00000400772 NFIBO00712 420 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms