RNA–Protein interactions for RNA: ENST00000398975.6

COL13A1-204, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 1,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-204ENST00000398975 CREB3L3Q68CJ9 461 aa16.98■□□□□ 0.31
COL13A1-204ENST00000398975 CCDC174Q6PII3 467 aa16.98■□□□□ 0.31
COL13A1-204ENST00000398975 KIAA1211Q6ZU35 1233 aa16.98■□□□□ 0.31
COL13A1-204ENST00000398975 RANBP17Q9H2T7 1088 aaKnown RBP16.98■□□□□ 0.31
COL13A1-204ENST00000398975 GPHNQ9NQX3 736 aaPredicted RBP16.98■□□□□ 0.31
COL13A1-204ENST00000398975 PDE4DIPQ5VU43 2346 aa16.98■□□□□ 0.31
COL13A1-204ENST00000398975 LCTP09848 1927 aa16.98■□□□□ 0.31
COL13A1-204ENST00000398975 ZNF792Q3KQV3 632 aa16.97■□□□□ 0.31
COL13A1-204ENST00000398975 OLFML2BQ68BL8 750 aa16.97■□□□□ 0.31
COL13A1-204ENST00000398975 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.97■□□□□ 0.31
COL13A1-204ENST00000398975 MAML3Q96JK9 1138 aa16.97■□□□□ 0.31
COL13A1-204ENST00000398975 FGD4Q96M96 766 aa16.97■□□□□ 0.31
COL13A1-204ENST00000398975 UBAC1Q9BSL1 405 aa16.97■□□□□ 0.31
COL13A1-204ENST00000398975 KAT14Q9H8E8 782 aa16.97■□□□□ 0.31
COL13A1-204ENST00000398975 HMX1Q9NP08 348 aaPredicted RBP16.97■□□□□ 0.31
COL13A1-204ENST00000398975 HOMER2Q9NSB8 354 aa16.97■□□□□ 0.31
COL13A1-204ENST00000398975 FDX1P10109 184 aa16.96■□□□□ 0.31
COL13A1-204ENST00000398975 COPB2P35606 906 aa16.96■□□□□ 0.31
COL13A1-204ENST00000398975 MNX1P50219 401 aaPredicted RBP16.96■□□□□ 0.31
COL13A1-204ENST00000398975 KCTD2Q14681 263 aa16.96■□□□□ 0.31
COL13A1-204ENST00000398975 SLC35G1Q2M3R5 365 aa16.96■□□□□ 0.31
COL13A1-204ENST00000398975 CCDC178Q5BJE1 867 aa16.96■□□□□ 0.31
COL13A1-204ENST00000398975 MUM1L1Q5H9M0 696 aa16.96■□□□□ 0.31
COL13A1-204ENST00000398975 LHX8Q68G74 356 aa16.96■□□□□ 0.31
COL13A1-204ENST00000398975 NCOA7Q8NI08 942 aa16.96■□□□□ 0.31
COL13A1-204ENST00000398975 UBA5Q9GZZ9 404 aa16.96■□□□□ 0.31
COL13A1-204ENST00000398975 CYBAP13498 195 aa16.95■□□□□ 0.3
COL13A1-204ENST00000398975 TRDNQ13061 729 aa16.95■□□□□ 0.3
COL13A1-204ENST00000398975 PRAMEF19Q5SWL8 479 aa16.95■□□□□ 0.3
COL13A1-204ENST00000398975 IFIT1BQ5T764 474 aaKnown RBP16.95■□□□□ 0.3
COL13A1-204ENST00000398975 MFSD14CQ5VZR4 134 aa16.95■□□□□ 0.3
COL13A1-204ENST00000398975 RASEFQ8IZ41 740 aa16.95■□□□□ 0.3
COL13A1-204ENST00000398975 STAG2Q8N3U4 1231 aa16.95■□□□□ 0.3
COL13A1-204ENST00000398975 CHST13Q8NET6 341 aa16.95■□□□□ 0.3
COL13A1-204ENST00000398975 IGDCC4Q8TDY8 1250 aa16.95■□□□□ 0.3
COL13A1-204ENST00000398975 RNF146Q9NTX7 359 aa16.95■□□□□ 0.3
COL13A1-204ENST00000398975 CTDP1Q9Y5B0 961 aaPredicted RBP16.95■□□□□ 0.3
COL13A1-204ENST00000398975 MCM3APO60318 1980 aa16.95■□□□□ 0.3
COL13A1-204ENST00000398975 IFIT3O14879 490 aaKnown RBP16.94■□□□□ 0.3
COL13A1-204ENST00000398975 ICAM1P05362 532 aa16.94■□□□□ 0.3
COL13A1-204ENST00000398975 ALAS1P13196 640 aa16.94■□□□□ 0.3
COL13A1-204ENST00000398975 RALYLQ86SE5 291 aaKnown RBP16.94■□□□□ 0.3
COL13A1-204ENST00000398975 DIS3LQ8TF46 1054 aaKnown RBP16.94■□□□□ 0.3
COL13A1-204ENST00000398975 A1CFQ9NQ94 594 aaKnown RBP16.94■□□□□ 0.3
COL13A1-204ENST00000398975 ASTN1O14525 1302 aa16.94■□□□□ 0.3
COL13A1-204ENST00000398975 TFRCP02786 760 aaKnown RBP16.93■□□□□ 0.3
COL13A1-204ENST00000398975 CNTN2Q02246 1040 aa16.93■□□□□ 0.3
COL13A1-204ENST00000398975 GPATCH4Q5T3I0 446 aaKnown RBP16.93■□□□□ 0.3
COL13A1-204ENST00000398975 TRERF1Q96PN7 1200 aa16.93■□□□□ 0.3
COL13A1-204ENST00000398975 OGDHLQ9ULD0 1010 aa16.93■□□□□ 0.3
COL13A1-204ENST00000398975 CCPG1Q9ULG6 757 aa16.93■□□□□ 0.3
COL13A1-204ENST00000398975 DIS3Q9Y2L1 958 aaKnown RBP16.93■□□□□ 0.3
COL13A1-204ENST00000398975 DDX49Q9Y6V7 483 aaKnown RBP16.93■□□□□ 0.3
COL13A1-204ENST00000398975 FARP2O94887 1054 aaPredicted RBP16.92■□□□□ 0.3
COL13A1-204ENST00000398975 ASPRV1Q53RT3 343 aa16.92■□□□□ 0.3
COL13A1-204ENST00000398975 TMEM67Q5HYA8 995 aa16.92■□□□□ 0.3
COL13A1-204ENST00000398975 ADGRF4Q8IZF3 695 aa16.92■□□□□ 0.3
COL13A1-204ENST00000398975 FAM133AQ8N9E0 248 aa16.92■□□□□ 0.3
COL13A1-204ENST00000398975 CLEC4DQ8WXI8 215 aa16.92■□□□□ 0.3
COL13A1-204ENST00000398975 DDX11Q96FC9 970 aa16.92■□□□□ 0.3
COL13A1-204ENST00000398975 PURBQ96QR8 312 aaKnown RBP16.92■□□□□ 0.3
COL13A1-204ENST00000398975 TINF2Q9BSI4 451 aa16.92■□□□□ 0.3
COL13A1-204ENST00000398975 ACAD9Q9H845 621 aa16.92■□□□□ 0.3
COL13A1-204ENST00000398975 LY9Q9HBG7 655 aa16.92■□□□□ 0.3
COL13A1-204ENST00000398975 FBXO40Q9UH90 709 aa16.92■□□□□ 0.3
COL13A1-204ENST00000398975 MAD2L2Q9UI95 211 aa16.92■□□□□ 0.3
COL13A1-204ENST00000398975 ALPK3Q96L96 1907 aa16.92■□□□□ 0.3
COL13A1-204ENST00000398975 PALM3A6NDB9 673 aaPredicted RBP16.91■□□□□ 0.3
COL13A1-204ENST00000398975 SOWAHBA6NEL2 793 aa16.91■□□□□ 0.3
COL13A1-204ENST00000398975 NFIBO00712 420 aa16.91■□□□□ 0.3
COL13A1-204ENST00000398975 PRC1O43663 620 aa16.91■□□□□ 0.3
COL13A1-204ENST00000398975 SNAI1O95863 264 aaPredicted RBP16.91■□□□□ 0.3
COL13A1-204ENST00000398975 PARP1P09874 1014 aaKnown RBP16.91■□□□□ 0.3
COL13A1-204ENST00000398975 TROAPQ12815 778 aa16.91■□□□□ 0.3
COL13A1-204ENST00000398975 GRM4Q14833 912 aa16.91■□□□□ 0.3
COL13A1-204ENST00000398975 WTAPQ15007 396 aa16.91■□□□□ 0.3
COL13A1-204ENST00000398975 TKFCQ3LXA3 575 aa16.91■□□□□ 0.3
COL13A1-204ENST00000398975 ADCK5Q3MIX3 580 aa16.91■□□□□ 0.3
COL13A1-204ENST00000398975 CASC1Q6TDU7 716 aa16.91■□□□□ 0.3
COL13A1-204ENST00000398975 ANKRD35Q8N283 1001 aa16.91■□□□□ 0.3
COL13A1-204ENST00000398975 JMJD4Q9H9V9 463 aa16.91■□□□□ 0.3
COL13A1-204ENST00000398975 SLC5A4Q9NY91 659 aa16.91■□□□□ 0.3
COL13A1-204ENST00000398975 LRRC37A2A6NM11 1700 aa16.9■□□□□ 0.3
COL13A1-204ENST00000398975 MYH6P13533 1939 aa16.9■□□□□ 0.3
COL13A1-204ENST00000398975 ZNF865P0CJ78 1059 aaPredicted RBP16.9■□□□□ 0.3
COL13A1-204ENST00000398975 ANO1Q5XXA6 986 aa16.9■□□□□ 0.3
COL13A1-204ENST00000398975 MAMDC4Q6UXC1 1216 aa16.9■□□□□ 0.3
COL13A1-204ENST00000398975 KCNB2Q92953 911 aa16.9■□□□□ 0.3
COL13A1-204ENST00000398975 MYL10Q9BUA6 226 aa16.9■□□□□ 0.3
COL13A1-204ENST00000398975 LRRC2Q9BYS8 371 aa16.9■□□□□ 0.3
COL13A1-204ENST00000398975 CYP39A1Q9NYL5 469 aa16.9■□□□□ 0.3
COL13A1-204ENST00000398975 DDX20Q9UHI6 824 aaKnown RBP16.9■□□□□ 0.3
COL13A1-204ENST00000398975 BAZ2BQ9UIF8 2168 aaKnown RBP16.89■□□□□ 0.3
COL13A1-204ENST00000398975 KLRF2D3W0D1 207 aa16.89■□□□□ 0.29
COL13A1-204ENST00000398975 SH2B2O14492 632 aaPredicted RBP16.89■□□□□ 0.29
COL13A1-204ENST00000398975 PPP1R11O60927 126 aaPredicted RBP16.89■□□□□ 0.29
COL13A1-204ENST00000398975 CNGA1P29973 690 aa16.89■□□□□ 0.29
COL13A1-204ENST00000398975 MCM5P33992 734 aa16.89■□□□□ 0.29
COL13A1-204ENST00000398975 CDC37Q16543 378 aaPredicted RBP16.89■□□□□ 0.29
COL13A1-204ENST00000398975 TSGA10IPQ3SY00 556 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms