RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 POMGNT1Q8WZA1 660 aa10.27□□□□□ -0.76
ATL3-201ENST00000398868 APPBP2Q92624 585 aa10.27□□□□□ -0.76
ATL3-201ENST00000398868 DYNLL2Q96FJ2 89 aa10.27□□□□□ -0.76
ATL3-201ENST00000398868 CLIC6Q96NY7 704 aa10.27□□□□□ -0.76
ATL3-201ENST00000398868 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.27□□□□□ -0.76
ATL3-201ENST00000398868 SNX14Q9Y5W7 946 aa10.27□□□□□ -0.76
ATL3-201ENST00000398868 CUL7Q14999 1698 aa10.27□□□□□ -0.76
ATL3-201ENST00000398868 CEP104O60308 925 aa10.27□□□□□ -0.77
ATL3-201ENST00000398868 NAA35Q5VZE5 725 aa10.27□□□□□ -0.77
ATL3-201ENST00000398868 HAUS3Q68CZ6 603 aa10.27□□□□□ -0.77
ATL3-201ENST00000398868 KCTD16Q68DU8 428 aa10.27□□□□□ -0.77
ATL3-201ENST00000398868 TTBK2Q6IQ55 1244 aa10.27□□□□□ -0.77
ATL3-201ENST00000398868 SCARA5Q6ZMJ2 495 aa10.27□□□□□ -0.77
ATL3-201ENST00000398868 IFT20Q8IY31 132 aa10.27□□□□□ -0.77
ATL3-201ENST00000398868 SLF1Q9BQI6 1058 aa10.27□□□□□ -0.77
ATL3-201ENST00000398868 AS3MTQ9HBK9 375 aa10.27□□□□□ -0.77
ATL3-201ENST00000398868 HELLSQ9NRZ9 838 aa10.27□□□□□ -0.77
ATL3-201ENST00000398868 SYNRGQ9UMZ2 1314 aa10.27□□□□□ -0.77
ATL3-201ENST00000398868 SYNDIG1LA6NDD5 238 aa10.27□□□□□ -0.77
ATL3-201ENST00000398868 CASP2P42575 452 aa10.27□□□□□ -0.77
ATL3-201ENST00000398868 NUMBP49757 651 aa10.27□□□□□ -0.77
ATL3-201ENST00000398868 IL1RL1Q01638 556 aa10.27□□□□□ -0.77
ATL3-201ENST00000398868 ANO4Q32M45 955 aa10.27□□□□□ -0.77
ATL3-201ENST00000398868 NXNQ6DKJ4 435 aa10.27□□□□□ -0.77
ATL3-201ENST00000398868 MYLK4Q86YV6 388 aaPredicted RBP10.27□□□□□ -0.77
ATL3-201ENST00000398868 CCDC125Q86Z20 511 aa10.27□□□□□ -0.77
ATL3-201ENST00000398868 SEPT12Q8IYM1 358 aa10.27□□□□□ -0.77
ATL3-201ENST00000398868 LSM14BQ9BX40 385 aaKnown RBP10.27□□□□□ -0.77
ATL3-201ENST00000398868 SLC39A2Q9NP94 309 aa10.27□□□□□ -0.77
ATL3-201ENST00000398868 NEURL1BA8MQ27 555 aa10.27□□□□□ -0.77
ATL3-201ENST00000398868 MARCH10Q8NA82 808 aaPredicted RBP10.27□□□□□ -0.77
ATL3-201ENST00000398868 ZNF75DP51815 510 aa10.27□□□□□ -0.77
ATL3-201ENST00000398868 RNF217Q8TC41 542 aa10.27□□□□□ -0.77
ATL3-201ENST00000398868 PI4K2BQ8TCG2 481 aa10.27□□□□□ -0.77
ATL3-201ENST00000398868 MTRQ99707 1265 aa10.27□□□□□ -0.77
ATL3-201ENST00000398868 MTUS1Q9ULD2 1270 aa10.27□□□□□ -0.77
ATL3-201ENST00000398868 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.27□□□□□ -0.77
ATL3-201ENST00000398868 ZBTB1Q9Y2K1 713 aa10.27□□□□□ -0.77
ATL3-201ENST00000398868 INO80B-WBP1J3KQ70 363 aa10.26□□□□□ -0.77
ATL3-201ENST00000398868 KRT15P19012 456 aa10.26□□□□□ -0.77
ATL3-201ENST00000398868 NFX1Q12986 1120 aaKnown RBP10.26□□□□□ -0.77
ATL3-201ENST00000398868 HS1BP3Q53T59 392 aa10.26□□□□□ -0.77
ATL3-201ENST00000398868 RRAGAQ7L523 313 aa10.26□□□□□ -0.77
ATL3-201ENST00000398868 INO80BQ9C086 356 aaPredicted RBP10.26□□□□□ -0.77
ATL3-201ENST00000398868 TRPC5Q9UL62 973 aaPredicted RBP10.26□□□□□ -0.77
ATL3-201ENST00000398868 NR1I2O75469 434 aa10.26□□□□□ -0.77
ATL3-201ENST00000398868 ATP5DP30049 168 aa10.26□□□□□ -0.77
ATL3-201ENST00000398868 FANCCQ00597 558 aa10.26□□□□□ -0.77
ATL3-201ENST00000398868 NONOQ15233 471 aaKnown RBP eCLIP10.26□□□□□ -0.77
ATL3-201ENST00000398868 AOC3Q16853 763 aa10.26□□□□□ -0.77
ATL3-201ENST00000398868 DESI2Q9BSY9 194 aa10.26□□□□□ -0.77
ATL3-201ENST00000398868 ZNF277Q9NRM2 450 aaPredicted RBP10.26□□□□□ -0.77
ATL3-201ENST00000398868 DDX25Q9UHL0 483 aaKnown RBP10.26□□□□□ -0.77
ATL3-201ENST00000398868 NUB1Q9Y5A7 615 aa10.26□□□□□ -0.77
ATL3-201ENST00000398868 E7EWF7 191 aa10.26□□□□□ -0.77
ATL3-201ENST00000398868 SNCBQ16143 134 aa10.26□□□□□ -0.77
ATL3-201ENST00000398868 ANO1Q5XXA6 986 aa10.26□□□□□ -0.77
ATL3-201ENST00000398868 ZNF654Q8IZM8 581 aa10.26□□□□□ -0.77
ATL3-201ENST00000398868 CCDC89Q8N998 374 aa10.26□□□□□ -0.77
ATL3-201ENST00000398868 NAP1L4Q99733 375 aaKnown RBP10.26□□□□□ -0.77
ATL3-201ENST00000398868 OLA1Q9NTK5 396 aaKnown RBP10.26□□□□□ -0.77
ATL3-201ENST00000398868 POLR3EQ9NVU0 708 aa10.26□□□□□ -0.77
ATL3-201ENST00000398868 PTPN22Q9Y2R2 807 aa10.26□□□□□ -0.77
ATL3-201ENST00000398868 CD2APQ9Y5K6 639 aa10.26□□□□□ -0.77
ATL3-201ENST00000398868 GPATCH8Q9UKJ3 1502 aaKnown RBP10.26□□□□□ -0.77
ATL3-201ENST00000398868 BMP15O95972 392 aa10.26□□□□□ -0.77
ATL3-201ENST00000398868 CNNM4Q6P4Q7 775 aa10.26□□□□□ -0.77
ATL3-201ENST00000398868 REXO1Q8N1G1 1221 aaKnown RBP10.26□□□□□ -0.77
ATL3-201ENST00000398868 COA7Q96BR5 231 aa10.26□□□□□ -0.77
ATL3-201ENST00000398868 TLR7Q9NYK1 1049 aaKnown RBP10.26□□□□□ -0.77
ATL3-201ENST00000398868 MAST3O60307 1309 aa10.26□□□□□ -0.77
ATL3-201ENST00000398868 GIPC1O14908 333 aa10.26□□□□□ -0.77
ATL3-201ENST00000398868 POLR2MP0CAP2 368 aa10.26□□□□□ -0.77
ATL3-201ENST00000398868 ADD1P35611 737 aaKnown RBP10.26□□□□□ -0.77
ATL3-201ENST00000398868 PIK3CAP42336 1068 aa10.26□□□□□ -0.77
ATL3-201ENST00000398868 PRAMEF18Q5VWM3 479 aa10.26□□□□□ -0.77
ATL3-201ENST00000398868 FAM117BQ6P1L5 589 aa10.26□□□□□ -0.77
ATL3-201ENST00000398868 CTAGE3PQ8IX95 158 aa10.26□□□□□ -0.77
ATL3-201ENST00000398868 BCAS4Q8TDM0 211 aa10.26□□□□□ -0.77
ATL3-201ENST00000398868 U2AF1L4Q8WU68 220 aaKnown RBP10.26□□□□□ -0.77
ATL3-201ENST00000398868 SPDL1Q96EA4 605 aa10.26□□□□□ -0.77
ATL3-201ENST00000398868 INTUQ9ULD6 942 aa10.26□□□□□ -0.77
ATL3-201ENST00000398868 KRT71Q3SY84 523 aa10.26□□□□□ -0.77
ATL3-201ENST00000398868 CCDC157Q569K6 752 aa10.26□□□□□ -0.77
ATL3-201ENST00000398868 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.26□□□□□ -0.77
ATL3-201ENST00000398868 N4BP2L2Q92802 583 aaPredicted RBP10.26□□□□□ -0.77
ATL3-201ENST00000398868 SLC10A4Q96EP9 437 aa10.26□□□□□ -0.77
ATL3-201ENST00000398868 SLC4A7Q9Y6M7 1214 aa10.26□□□□□ -0.77
ATL3-201ENST00000398868 KIAA0232Q92628 1395 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 PRKAB2O43741 272 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 SASH1O94885 1247 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 SERPINB6P35237 376 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 DALRD3Q5D0E6 543 aaKnown RBP10.25□□□□□ -0.77
ATL3-201ENST00000398868 LIN9Q5TKA1 542 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 FBXO11Q86XK2 927 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 AP5M1Q9H0R1 490 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 hCG_2014768A0A024R1R8 64 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 DMTNQ08495 405 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 UBE2SQ16763 222 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 PLA2G4DQ86XP0 818 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms