RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 GJA10Q969M2 543 aa13.75□□□□□ -0.21
SOCS6-201ENST00000397942 PARD6BQ9BYG5 372 aa13.75□□□□□ -0.21
SOCS6-201ENST00000397942 MYO1AQ9UBC5 1043 aa13.75□□□□□ -0.21
SOCS6-201ENST00000397942 BUB1O43683 1085 aa13.74□□□□□ -0.21
SOCS6-201ENST00000397942 VIMP08670 466 aaKnown RBP13.74□□□□□ -0.21
SOCS6-201ENST00000397942 ZBTB16Q05516 673 aa13.74□□□□□ -0.21
SOCS6-201ENST00000397942 IQCB1Q15051 598 aa13.74□□□□□ -0.21
SOCS6-201ENST00000397942 USP17L2Q6R6M4 530 aa13.74□□□□□ -0.21
SOCS6-201ENST00000397942 LARSQ9P2J5 1176 aaKnown RBP13.74□□□□□ -0.21
SOCS6-201ENST00000397942 USP42Q9H9J4 1324 aaKnown RBP13.74□□□□□ -0.21
SOCS6-201ENST00000397942 SHROOM2Q13796 1616 aa13.74□□□□□ -0.21
SOCS6-201ENST00000397942 KCNK3O14649 394 aa13.74□□□□□ -0.21
SOCS6-201ENST00000397942 CCNE1P24864 410 aa13.74□□□□□ -0.21
SOCS6-201ENST00000397942 SEL1L2Q5TEA6 688 aa13.74□□□□□ -0.21
SOCS6-201ENST00000397942 PLA2G4DQ86XP0 818 aa13.74□□□□□ -0.21
SOCS6-201ENST00000397942 TBCKQ8TEA7 893 aa13.74□□□□□ -0.21
SOCS6-201ENST00000397942 LARP4BQ92615 738 aaKnown RBP13.74□□□□□ -0.21
SOCS6-201ENST00000397942 CUEDC2Q9H467 287 aa13.74□□□□□ -0.21
SOCS6-201ENST00000397942 NPHP4O75161 1426 aaPredicted RBP13.74□□□□□ -0.21
SOCS6-201ENST00000397942 PRDX5P30044 214 aa13.74□□□□□ -0.21
SOCS6-201ENST00000397942 INPP5BP32019 993 aa13.74□□□□□ -0.21
SOCS6-201ENST00000397942 P2RX5Q93086 422 aa13.74□□□□□ -0.21
SOCS6-201ENST00000397942 SERPINB13Q9UIV8 391 aa13.74□□□□□ -0.21
SOCS6-201ENST00000397942 GDAQ9Y2T3 454 aa13.74□□□□□ -0.21
SOCS6-201ENST00000397942 DDX39AO00148 427 aaKnown RBP13.74□□□□□ -0.21
SOCS6-201ENST00000397942 ZMYND10O75800 440 aa13.74□□□□□ -0.21
SOCS6-201ENST00000397942 EHHADHQ08426 723 aa13.74□□□□□ -0.21
SOCS6-201ENST00000397942 BCAS4Q8TDM0 211 aa13.74□□□□□ -0.21
SOCS6-201ENST00000397942 DYNLL2Q96FJ2 89 aa13.74□□□□□ -0.21
SOCS6-201ENST00000397942 AK8Q96MA6 479 aa13.74□□□□□ -0.21
SOCS6-201ENST00000397942 PHLPP2Q6ZVD8 1323 aa13.74□□□□□ -0.21
SOCS6-201ENST00000397942 ATP2B4P23634 1241 aa13.74□□□□□ -0.21
SOCS6-201ENST00000397942 GUCY2FP51841 1108 aa13.74□□□□□ -0.21
SOCS6-201ENST00000397942 RETREG2Q8NC44 543 aa13.74□□□□□ -0.21
SOCS6-201ENST00000397942 PAGE5Q96GU1 130 aa13.74□□□□□ -0.21
SOCS6-201ENST00000397942 KIAA1024Q9UPX6 916 aa13.74□□□□□ -0.21
SOCS6-201ENST00000397942 CEP83Q9Y592 693 aa13.74□□□□□ -0.21
SOCS6-201ENST00000397942 GAS7O60861 476 aa13.73□□□□□ -0.21
SOCS6-201ENST00000397942 ZNF365Q70YC5 407 aa13.73□□□□□ -0.21
SOCS6-201ENST00000397942 SGMS1Q86VZ5 419 aa13.73□□□□□ -0.21
SOCS6-201ENST00000397942 LSM14BQ9BX40 385 aaKnown RBP13.73□□□□□ -0.21
SOCS6-201ENST00000397942 SAMD15Q9P1V8 674 aa13.73□□□□□ -0.21
SOCS6-201ENST00000397942 MKRN1Q9UHC7 482 aaKnown RBP13.73□□□□□ -0.21
SOCS6-201ENST00000397942 PCDHA4Q9UN74 947 aa13.73□□□□□ -0.21
SOCS6-201ENST00000397942 NCAPD2Q15021 1401 aa13.73□□□□□ -0.21
SOCS6-201ENST00000397942 GNA14O95837 355 aa13.73□□□□□ -0.21
SOCS6-201ENST00000397942 ERFEQ4G0M1 354 aa13.73□□□□□ -0.21
SOCS6-201ENST00000397942 PPP1R14CQ8TAE6 165 aa13.73□□□□□ -0.21
SOCS6-201ENST00000397942 MED4Q9NPJ6 270 aa13.73□□□□□ -0.21
SOCS6-201ENST00000397942 LEMD3Q9Y2U8 911 aa13.73□□□□□ -0.21
SOCS6-201ENST00000397942 ADGRB3O60242 1522 aa13.73□□□□□ -0.21
SOCS6-201ENST00000397942 CALRP27797 417 aaKnown RBP13.73□□□□□ -0.21
SOCS6-201ENST00000397942 GTF2A1P52655 376 aaPredicted RBP13.73□□□□□ -0.21
SOCS6-201ENST00000397942 LRRC41Q15345 812 aa13.73□□□□□ -0.21
SOCS6-201ENST00000397942 UTP11Q9Y3A2 253 aaKnown RBP13.73□□□□□ -0.21
SOCS6-201ENST00000397942 ATP8B1O43520 1251 aa13.73□□□□□ -0.21
SOCS6-201ENST00000397942 ZBED6P86452 979 aa13.73□□□□□ -0.21
SOCS6-201ENST00000397942 FOXO4P98177 505 aa13.73□□□□□ -0.21
SOCS6-201ENST00000397942 RESP18Q5W5W9 173 aa13.73□□□□□ -0.21
SOCS6-201ENST00000397942 U2AF1L4Q8WU68 220 aaKnown RBP13.73□□□□□ -0.21
SOCS6-201ENST00000397942 TMEM232C9JQI7 657 aa13.72□□□□□ -0.21
SOCS6-201ENST00000397942 NDUFA10O95299 355 aa13.72□□□□□ -0.21
SOCS6-201ENST00000397942 PNMA6AP0CW24 399 aaPredicted RBP13.72□□□□□ -0.21
SOCS6-201ENST00000397942 FAM182BQ5T319 152 aa13.72□□□□□ -0.21
SOCS6-201ENST00000397942 GPATCH4Q5T3I0 446 aaKnown RBP13.72□□□□□ -0.21
SOCS6-201ENST00000397942 ZNF658Q5TYW1 1059 aaPredicted RBP13.72□□□□□ -0.21
SOCS6-201ENST00000397942 SLFN13Q68D06 897 aa13.72□□□□□ -0.21
SOCS6-201ENST00000397942 BRINP3Q76B58 766 aa13.72□□□□□ -0.21
SOCS6-201ENST00000397942 ASIC3Q9UHC3 531 aa13.72□□□□□ -0.21
SOCS6-201ENST00000397942 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.72□□□□□ -0.21
SOCS6-201ENST00000397942 KRT5P13647 590 aa13.72□□□□□ -0.21
SOCS6-201ENST00000397942 KRT31Q15323 416 aa13.72□□□□□ -0.21
SOCS6-201ENST00000397942 ALX1Q15699 326 aa13.72□□□□□ -0.21
SOCS6-201ENST00000397942 ARL6IP4Q66PJ3 421 aaKnown RBP13.72□□□□□ -0.21
SOCS6-201ENST00000397942 FAM178BQ8IXR5 827 aa13.72□□□□□ -0.21
SOCS6-201ENST00000397942 USP27XA6NNY8 438 aa13.72□□□□□ -0.21
SOCS6-201ENST00000397942 GSG1L2A8MUP6 293 aa13.72□□□□□ -0.21
SOCS6-201ENST00000397942 LAD1O00515 517 aa13.72□□□□□ -0.21
SOCS6-201ENST00000397942 DNAI2Q9GZS0 605 aa13.72□□□□□ -0.21
SOCS6-201ENST00000397942 MAGEF1Q9HAY2 307 aa13.72□□□□□ -0.21
SOCS6-201ENST00000397942 KDM3AQ9Y4C1 1321 aa13.72□□□□□ -0.21
SOCS6-201ENST00000397942 USP17L3A6NCW0 530 aa13.72□□□□□ -0.21
SOCS6-201ENST00000397942 USP17L4A6NCW7 530 aa13.72□□□□□ -0.21
SOCS6-201ENST00000397942 BCRP11274 1271 aa13.72□□□□□ -0.21
SOCS6-201ENST00000397942 PABPC4Q13310 644 aaKnown RBP eCLIP13.72□□□□□ -0.21
SOCS6-201ENST00000397942 USP17L1Q7RTZ2 530 aa13.72□□□□□ -0.21
SOCS6-201ENST00000397942 OXER1Q8TDS5 423 aa13.72□□□□□ -0.21
SOCS6-201ENST00000397942 COL4A3BPQ9Y5P4 624 aa13.72□□□□□ -0.21
SOCS6-201ENST00000397942 CYP2J2P51589 502 aa13.72□□□□□ -0.21
SOCS6-201ENST00000397942 SF3A3Q12874 501 aaKnown RBP eCLIP13.72□□□□□ -0.21
SOCS6-201ENST00000397942 SHC4Q6S5L8 630 aa13.72□□□□□ -0.21
SOCS6-201ENST00000397942 TMTC3Q6ZXV5 915 aa13.72□□□□□ -0.21
SOCS6-201ENST00000397942 DPH6Q7L8W6 267 aa13.72□□□□□ -0.21
SOCS6-201ENST00000397942 UBL4BQ8N7F7 174 aa13.72□□□□□ -0.21
SOCS6-201ENST00000397942 ABCA6Q8N139 1617 aa13.72□□□□□ -0.21
SOCS6-201ENST00000397942 MYCLP12524 364 aaPredicted RBP13.71□□□□□ -0.21
SOCS6-201ENST00000397942 DOK7Q18PE1 504 aa13.71□□□□□ -0.21
SOCS6-201ENST00000397942 WDR44Q5JSH3 913 aa13.71□□□□□ -0.21
SOCS6-201ENST00000397942 FAM196AQ6ZSG2 479 aa13.71□□□□□ -0.21
SOCS6-201ENST00000397942 ENAHQ8N8S7 591 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms