RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 SND1Q7KZF4 910 aaKnown RBP eCLIP19.39■□□□□ 0.79e-7■□□□□ 10.4
EWSR1-206ENST00000397938 TRIM47Q96LD4 638 aa19.39■□□□□ 0.7
EWSR1-206ENST00000397938 GEMIN8Q9NWZ8 242 aaKnown RBP19.39■□□□□ 0.7
EWSR1-206ENST00000397938 MAGEC2Q9UBF1 373 aaPredicted RBP19.39■□□□□ 0.7
EWSR1-206ENST00000397938 FAM169AQ9Y6X4 670 aa19.39■□□□□ 0.7
EWSR1-206ENST00000397938 B4DLN1 442 aa19.39■□□□□ 0.69
EWSR1-206ENST00000397938 GOLGA8KD6RF30 607 aa19.39■□□□□ 0.69
EWSR1-206ENST00000397938 SMIM22K7EJ46 135 aa19.39■□□□□ 0.69
EWSR1-206ENST00000397938 KCNB1Q14721 858 aa19.39■□□□□ 0.69
EWSR1-206ENST00000397938 ARL6IP4Q66PJ3 421 aaKnown RBP19.39■□□□□ 0.69
EWSR1-206ENST00000397938 ZNF572Q7Z3I7 529 aaPredicted RBP19.39■□□□□ 0.69
EWSR1-206ENST00000397938 RETREG2Q8NC44 543 aa19.39■□□□□ 0.69
EWSR1-206ENST00000397938 SDR42E1Q8WUS8 393 aa19.39■□□□□ 0.69
EWSR1-206ENST00000397938 NUP58Q9BVL2 599 aa19.39■□□□□ 0.69
EWSR1-206ENST00000397938 EXOC1Q9NV70 894 aa19.39■□□□□ 0.69
EWSR1-206ENST00000397938 DUSP10Q9Y6W6 482 aa19.39■□□□□ 0.69
EWSR1-206ENST00000397938 MACROD2A1Z1Q3 448 aa19.38■□□□□ 0.69
EWSR1-206ENST00000397938 RASSF10A6NK89 507 aa19.38■□□□□ 0.69
EWSR1-206ENST00000397938 CALM1P0DP23 149 aa19.38■□□□□ 0.69
EWSR1-206ENST00000397938 CALM2P0DP24 149 aa19.38■□□□□ 0.69
EWSR1-206ENST00000397938 CALM3P0DP25 149 aa19.38■□□□□ 0.69
EWSR1-206ENST00000397938 TRIM21P19474 475 aaKnown RBP19.38■□□□□ 0.69
EWSR1-206ENST00000397938 VAV2P52735 878 aa19.38■□□□□ 0.69
EWSR1-206ENST00000397938 ITIH3Q06033 890 aa19.38■□□□□ 0.69
EWSR1-206ENST00000397938 TOM1L2Q6ZVM7 507 aa19.38■□□□□ 0.69
EWSR1-206ENST00000397938 CREG2Q8IUH2 290 aa19.38■□□□□ 0.69
EWSR1-206ENST00000397938 SECISBP2LQ93073 1101 aaKnown RBP19.38■□□□□ 0.69
EWSR1-206ENST00000397938 SNX12Q9UMY4 172 aa19.38■□□□□ 0.69
EWSR1-206ENST00000397938 ZBED6P86452 979 aa19.38■□□□□ 0.69
EWSR1-206ENST00000397938 TSGA10Q9BZW7 698 aa19.38■□□□□ 0.69
EWSR1-206ENST00000397938 EHD4Q9H223 541 aa19.38■□□□□ 0.69
EWSR1-206ENST00000397938 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.38■□□□□ 0.69
EWSR1-206ENST00000397938 DDAH1O94760 285 aa19.38■□□□□ 0.69
EWSR1-206ENST00000397938 KIF5AQ12840 1032 aa19.38■□□□□ 0.69
EWSR1-206ENST00000397938 TTI2Q6NXR4 508 aa19.38■□□□□ 0.69
EWSR1-206ENST00000397938 BCAS4Q8TDM0 211 aa19.38■□□□□ 0.69
EWSR1-206ENST00000397938 NOC3LQ8WTT2 800 aaKnown RBP19.38■□□□□ 0.69
EWSR1-206ENST00000397938 KAT2BQ92831 832 aa19.38■□□□□ 0.69
EWSR1-206ENST00000397938 RRP36Q96EU6 259 aaKnown RBP19.38■□□□□ 0.69
EWSR1-206ENST00000397938 DISC1Q9NRI5 854 aa19.38■□□□□ 0.69
EWSR1-206ENST00000397938 TMOD3Q9NYL9 352 aa19.38■□□□□ 0.69
EWSR1-206ENST00000397938 SHTN1A0MZ66 631 aa19.37■□□□□ 0.69
EWSR1-206ENST00000397938 PSMA7O14818 248 aa19.37■□□□□ 0.69
EWSR1-206ENST00000397938 STARD3NLO95772 234 aa19.37■□□□□ 0.69
EWSR1-206ENST00000397938 LIG3P49916 1009 aa19.37■□□□□ 0.69
EWSR1-206ENST00000397938 EZH2Q15910 746 aaKnown RBP19.37■□□□□ 0.69
EWSR1-206ENST00000397938 TUBGCP2Q9BSJ2 902 aa19.37■□□□□ 0.69
EWSR1-206ENST00000397938 LRP2BPQ9P2M1 347 aa19.37■□□□□ 0.69
EWSR1-206ENST00000397938 NHSL1Q5SYE7 1610 aa19.37■□□□□ 0.69
EWSR1-206ENST00000397938 KLRC4O43908 158 aa19.37■□□□□ 0.69
EWSR1-206ENST00000397938 NLRP5P59047 1200 aa19.37■□□□□ 0.69
EWSR1-206ENST00000397938 GNGT1P63211 74 aa19.37■□□□□ 0.69
EWSR1-206ENST00000397938 CDK17Q00537 523 aa19.37■□□□□ 0.69
EWSR1-206ENST00000397938 NAALADL2Q58DX5 795 aa19.37■□□□□ 0.69
EWSR1-206ENST00000397938 MCTP2Q6DN12 878 aa19.37■□□□□ 0.69
EWSR1-206ENST00000397938 ADGRA1Q86SQ6 560 aa19.37■□□□□ 0.69
EWSR1-206ENST00000397938 C4orf32Q8N8J7 132 aa19.37■□□□□ 0.69
EWSR1-206ENST00000397938 HDAC7Q8WUI4 952 aa19.37■□□□□ 0.69
EWSR1-206ENST00000397938 CYP7A1P22680 504 aa19.36■□□□□ 0.69
EWSR1-206ENST00000397938 KLK7P49862 253 aa19.36■□□□□ 0.69
EWSR1-206ENST00000397938 CYP27A1Q02318 531 aa19.36■□□□□ 0.69
EWSR1-206ENST00000397938 SWT1Q5T5J6 900 aaKnown RBP19.36■□□□□ 0.69
EWSR1-206ENST00000397938 SRBD1Q8N5C6 995 aaKnown RBP19.36■□□□□ 0.69
EWSR1-206ENST00000397938 TRIM58Q8NG06 486 aa19.36■□□□□ 0.69
EWSR1-206ENST00000397938 LRRC1Q9BTT6 524 aa19.36■□□□□ 0.69
EWSR1-206ENST00000397938 DMGDHQ9UI17 866 aaKnown RBP19.36■□□□□ 0.69
EWSR1-206ENST00000397938 NUTM2BA6NNL0 878 aaPredicted RBP19.36■□□□□ 0.69
EWSR1-206ENST00000397938 NUTM2EB1AL46 878 aaPredicted RBP19.36■□□□□ 0.69
EWSR1-206ENST00000397938 OPA1O60313 960 aa19.36■□□□□ 0.69
EWSR1-206ENST00000397938 EPB41P11171 864 aaKnown RBP19.36■□□□□ 0.69
EWSR1-206ENST00000397938 IL2RBP14784 551 aa19.36■□□□□ 0.69
EWSR1-206ENST00000397938 BCAMP50895 628 aa19.36■□□□□ 0.69
EWSR1-206ENST00000397938 SF3B2Q13435 895 aaKnown RBP19.36■□□□□ 0.69
EWSR1-206ENST00000397938 IQCA1Q86XH1 822 aa19.36■□□□□ 0.69
EWSR1-206ENST00000397938 GIMAP8Q8ND71 665 aaPredicted RBP19.36■□□□□ 0.69
EWSR1-206ENST00000397938 NUP98P52948 1817 aa19.35■□□□□ 0.69
EWSR1-206ENST00000397938 ADAMTS3O15072 1205 aa19.35■□□□□ 0.69
EWSR1-206ENST00000397938 RHOBTB3O94955 611 aa19.35■□□□□ 0.69
EWSR1-206ENST00000397938 SCG2P13521 617 aa19.35■□□□□ 0.69
EWSR1-206ENST00000397938 ANKRD18AQ8IVF6 992 aa19.35■□□□□ 0.69
EWSR1-206ENST00000397938 LRWD1Q9UFC0 647 aa19.35■□□□□ 0.69
EWSR1-206ENST00000397938 ZNF263O14978 683 aa19.35■□□□□ 0.69
EWSR1-206ENST00000397938 SKOR1P84550 965 aa19.35■□□□□ 0.69
EWSR1-206ENST00000397938 TBC1D8BQ0IIM8 1120 aa19.35■□□□□ 0.69
EWSR1-206ENST00000397938 SPATA4Q8NEY3 305 aa19.35■□□□□ 0.69
EWSR1-206ENST00000397938 DUSP9Q99956 384 aaKnown RBP19.35■□□□□ 0.69
EWSR1-206ENST00000397938 NCAPGQ9BPX3 1015 aa19.35■□□□□ 0.69
EWSR1-206ENST00000397938 HINFPQ9BQA5 517 aa19.35■□□□□ 0.69
EWSR1-206ENST00000397938 ASAP1Q9ULH1 1129 aa19.35■□□□□ 0.69
EWSR1-206ENST00000397938 MYL1P05976 194 aa19.34■□□□□ 0.69
EWSR1-206ENST00000397938 PRLRP16471 622 aa19.34■□□□□ 0.69
EWSR1-206ENST00000397938 ATF3P18847 181 aa19.34■□□□□ 0.69
EWSR1-206ENST00000397938 EPHB4P54760 987 aa19.34■□□□□ 0.69
EWSR1-206ENST00000397938 SEMA3FQ13275 785 aa19.34■□□□□ 0.69
EWSR1-206ENST00000397938 POTEDQ86YR6 584 aa19.34■□□□□ 0.69
EWSR1-206ENST00000397938 CEP89Q96ST8 783 aa19.34■□□□□ 0.69
EWSR1-206ENST00000397938 CAPN6Q9Y6Q1 641 aa19.34■□□□□ 0.69
EWSR1-206ENST00000397938 BAZ2AQ9UIF9 1905 aaKnown RBP19.34■□□□□ 0.69
EWSR1-206ENST00000397938 MAGEB6P1A0A0J9YX57 407 aa19.34■□□□□ 0.69
EWSR1-206ENST00000397938 A0A1W2PQJ5 194 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms