RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 AIFM3Q96NN9 605 aa27.15■■□□□ 1.94
TSPAN4-202ENST00000397396 FBXO28Q9NVF7 368 aa27.15■■□□□ 1.94
TSPAN4-202ENST00000397396 VPS54Q9P1Q0 977 aa27.15■■□□□ 1.94
TSPAN4-202ENST00000397396 PNMA3Q9UL41 463 aa27.15■■□□□ 1.94
TSPAN4-202ENST00000397396 MMP1P03956 469 aa27.14■■□□□ 1.93
TSPAN4-202ENST00000397396 OSBPP22059 807 aa27.14■■□□□ 1.93
TSPAN4-202ENST00000397396 DSG3P32926 999 aa27.14■■□□□ 1.93
TSPAN4-202ENST00000397396 NAPAP54920 295 aa27.14■■□□□ 1.93
TSPAN4-202ENST00000397396 TEX2Q8IWB9 1127 aa27.14■■□□□ 1.93
TSPAN4-202ENST00000397396 GLT8D2Q9H1C3 349 aa27.14■■□□□ 1.93
TSPAN4-202ENST00000397396 ATP6V1DQ9Y5K8 247 aa27.14■■□□□ 1.93
TSPAN4-202ENST00000397396 BAZ2BQ9UIF8 2168 aaKnown RBP27.13■■□□□ 1.93
TSPAN4-202ENST00000397396 CCL15-CCL14A0A0B4J2E2 113 aa27.13■■□□□ 1.93
TSPAN4-202ENST00000397396 ESYT2A0FGR8 921 aa27.13■■□□□ 1.93
TSPAN4-202ENST00000397396 STXBP3O00186 592 aa27.13■■□□□ 1.93
TSPAN4-202ENST00000397396 SLC10A3P09131 477 aa27.13■■□□□ 1.93
TSPAN4-202ENST00000397396 CCL15Q16663 113 aa27.13■■□□□ 1.93
TSPAN4-202ENST00000397396 TREML2Q5T2D2 321 aa27.13■■□□□ 1.93
TSPAN4-202ENST00000397396 MB21D1Q8N884 522 aa27.13■■□□□ 1.93
TSPAN4-202ENST00000397396 GTF3C2Q8WUA4 911 aaPredicted RBP27.13■■□□□ 1.93
TSPAN4-202ENST00000397396 GPKOWQ92917 476 aaPredicted RBP eCLIP27.13■■□□□ 1.93
TSPAN4-202ENST00000397396 PHF20Q9BVI0 1012 aa27.13■■□□□ 1.93
TSPAN4-202ENST00000397396 ZSCAN16Q9H4T2 348 aaPredicted RBP27.13■■□□□ 1.93
TSPAN4-202ENST00000397396 SLC38A10Q9HBR0 1119 aa27.13■■□□□ 1.93
TSPAN4-202ENST00000397396 MANSC4A6NHS7 340 aaPredicted RBP27.12■■□□□ 1.93
TSPAN4-202ENST00000397396 GNA11P29992 359 aa27.12■■□□□ 1.93
TSPAN4-202ENST00000397396 FOSBP53539 338 aa27.12■■□□□ 1.93
TSPAN4-202ENST00000397396 OAZ1P54368 228 aa27.12■■□□□ 1.93
TSPAN4-202ENST00000397396 NLRP5P59047 1200 aa27.12■■□□□ 1.93
TSPAN4-202ENST00000397396 GNL2Q13823 731 aaKnown RBP27.12■■□□□ 1.93
TSPAN4-202ENST00000397396 BICD2Q8TD16 824 aa27.12■■□□□ 1.93
TSPAN4-202ENST00000397396 MS4A4AQ96JQ5 239 aa27.12■■□□□ 1.93
TSPAN4-202ENST00000397396 F13A1P00488 732 aa27.11■■□□□ 1.93
TSPAN4-202ENST00000397396 MOGSQ13724 837 aa27.11■■□□□ 1.93
TSPAN4-202ENST00000397396 SAMD1Q6SPF0 538 aaPredicted RBP27.11■■□□□ 1.93
TSPAN4-202ENST00000397396 ANKRD23Q86SG2 305 aa27.11■■□□□ 1.93
TSPAN4-202ENST00000397396 C6orf50Q9HD87 102 aa27.11■■□□□ 1.93
TSPAN4-202ENST00000397396 CREBZFQ9NS37 354 aa27.11■■□□□ 1.93
TSPAN4-202ENST00000397396 PARP14Q460N5 1801 aa27.1■■□□□ 1.93
TSPAN4-202ENST00000397396 VWA5AO00534 786 aa27.1■■□□□ 1.93
TSPAN4-202ENST00000397396 ICAM1P05362 532 aa27.1■■□□□ 1.93
TSPAN4-202ENST00000397396 INHBEP58166 350 aa27.1■■□□□ 1.93
TSPAN4-202ENST00000397396 GUCY1B3Q02153 619 aa27.1■■□□□ 1.93
TSPAN4-202ENST00000397396 PKP1Q13835 747 aa27.1■■□□□ 1.93
TSPAN4-202ENST00000397396 LBX2Q6XYB7 198 aa27.1■■□□□ 1.93
TSPAN4-202ENST00000397396 DAGLBQ8NCG7 672 aa27.1■■□□□ 1.93
TSPAN4-202ENST00000397396 ATG4CQ96DT6 458 aa27.1■■□□□ 1.93
TSPAN4-202ENST00000397396 ADAMTS5Q9UNA0 930 aa27.1■■□□□ 1.93
TSPAN4-202ENST00000397396 PCDHA1Q9Y5I3 950 aa27.1■■□□□ 1.93
TSPAN4-202ENST00000397396 ABCB11O95342 1321 aa27.09■■□□□ 1.93
TSPAN4-202ENST00000397396 SPDYE16A6NNV3 312 aaPredicted RBP27.09■■□□□ 1.93
TSPAN4-202ENST00000397396 KRT2P35908 639 aa27.09■■□□□ 1.93
TSPAN4-202ENST00000397396 APLP1P51693 650 aa27.09■■□□□ 1.93
TSPAN4-202ENST00000397396 MCTP1Q6DN14 999 aa27.09■■□□□ 1.93
TSPAN4-202ENST00000397396 BRAPQ7Z569 592 aa27.09■■□□□ 1.93
TSPAN4-202ENST00000397396 ZMYND12Q9H0C1 365 aa27.09■■□□□ 1.93
TSPAN4-202ENST00000397396 FOXP1Q9H334 677 aaPredicted RBP27.09■■□□□ 1.93
TSPAN4-202ENST00000397396 ZCCHC17Q9NP64 241 aaKnown RBP27.09■■□□□ 1.93
TSPAN4-202ENST00000397396 TESPA1A2RU30 521 aaPredicted RBP27.08■■□□□ 1.93
TSPAN4-202ENST00000397396 ATP2A1O14983 1001 aa27.08■■□□□ 1.93
TSPAN4-202ENST00000397396 MKRN3Q13064 507 aaKnown RBP27.08■■□□□ 1.93
TSPAN4-202ENST00000397396 OTUD7BQ6GQQ9 843 aa27.08■■□□□ 1.93
TSPAN4-202ENST00000397396 GPAT2Q6NUI2 795 aa27.08■■□□□ 1.93
TSPAN4-202ENST00000397396 CCDC174Q6PII3 467 aa27.08■■□□□ 1.93
TSPAN4-202ENST00000397396 DIS3L2Q8IYB7 885 aaKnown RBP27.08■■□□□ 1.93
TSPAN4-202ENST00000397396 ASCC2Q9H1I8 757 aaPredicted RBP27.08■■□□□ 1.93
TSPAN4-202ENST00000397396 PCDHA4Q9UN74 947 aa27.08■■□□□ 1.93
TSPAN4-202ENST00000397396 KCNJ14Q9UNX9 436 aa27.08■■□□□ 1.93
TSPAN4-202ENST00000397396 MRPL11Q9Y3B7 192 aaKnown RBP27.08■■□□□ 1.93
TSPAN4-202ENST00000397396 PPP1R11O60927 126 aaPredicted RBP27.07■■□□□ 1.92
TSPAN4-202ENST00000397396 ADCY7P51828 1080 aa27.07■■□□□ 1.92
TSPAN4-202ENST00000397396 KIF23Q02241 960 aaPredicted RBP27.07■■□□□ 1.92
TSPAN4-202ENST00000397396 BRI3BPQ8WY22 251 aa27.07■■□□□ 1.92
TSPAN4-202ENST00000397396 COA7Q96BR5 231 aa27.07■■□□□ 1.92
TSPAN4-202ENST00000397396 CCPG1Q9ULG6 757 aa27.07■■□□□ 1.92
TSPAN4-202ENST00000397396 ZDHHC9Q9Y397 364 aa27.07■■□□□ 1.92
TSPAN4-202ENST00000397396 SMCO2A6NFE2 343 aa27.06■■□□□ 1.92
TSPAN4-202ENST00000397396 MRPL12P52815 198 aaKnown RBP27.06■■□□□ 1.92
TSPAN4-202ENST00000397396 SREBF2Q12772 1141 aa27.06■■□□□ 1.92
TSPAN4-202ENST00000397396 MCTP2Q6DN12 878 aa27.06■■□□□ 1.92
TSPAN4-202ENST00000397396 CUL5Q93034 780 aa27.06■■□□□ 1.92
TSPAN4-202ENST00000397396 GJB4Q9NTQ9 266 aa27.06■■□□□ 1.92
TSPAN4-202ENST00000397396 RLFQ13129 1914 aa27.06■■□□□ 1.92
TSPAN4-202ENST00000397396 U2AF2P26368 475 aaKnown RBP eCLIP27.05■■□□□ 1.92
TSPAN4-202ENST00000397396 SNAP25P60880 206 aa27.05■■□□□ 1.92
TSPAN4-202ENST00000397396 TKFCQ3LXA3 575 aa27.05■■□□□ 1.92
TSPAN4-202ENST00000397396 USH1GQ495M9 461 aa27.05■■□□□ 1.92
TSPAN4-202ENST00000397396 BLIDQ8IZY5 108 aa27.05■■□□□ 1.92
TSPAN4-202ENST00000397396 A0A0G2JMZ2 1700 aa27.04■■□□□ 1.92
TSPAN4-202ENST00000397396 BTBD19C9JJ37 291 aa27.04■■□□□ 1.92
TSPAN4-202ENST00000397396 HERVK_113P62684 666 aa27.04■■□□□ 1.92
TSPAN4-202ENST00000397396 RESTQ13127 1097 aa27.04■■□□□ 1.92
TSPAN4-202ENST00000397396 TYW1BQ6NUM6 668 aa27.04■■□□□ 1.92
TSPAN4-202ENST00000397396 SAMD3Q8N6K7 520 aa27.04■■□□□ 1.92
TSPAN4-202ENST00000397396 PARK7Q99497 189 aaKnown RBP27.04■■□□□ 1.92
TSPAN4-202ENST00000397396 TEX13BQ9BXU2 312 aa27.04■■□□□ 1.92
TSPAN4-202ENST00000397396 MAF1Q9H063 256 aa27.04■■□□□ 1.92
TSPAN4-202ENST00000397396 RIC8AQ9NPQ8 531 aa27.04■■□□□ 1.92
TSPAN4-202ENST00000397396 ZNF536O15090 1300 aa27.04■■□□□ 1.92
TSPAN4-202ENST00000397396 RASSF10A6NK89 507 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms