RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 CNTN2Q02246 1040 aa21.61■■□□□ 1.05
FXN-203ENST00000396366 MFSD6Q6ZSS7 791 aa21.61■■□□□ 1.05
FXN-203ENST00000396366 DIAPH3Q9NSV4 1193 aa21.61■■□□□ 1.05
FXN-203ENST00000396366 TCP11L1Q9NUJ3 509 aa21.61■■□□□ 1.05
FXN-203ENST00000396366 NEDD4P46934 1319 aa21.6■■□□□ 1.05
FXN-203ENST00000396366 SOX1O00570 391 aaPredicted RBP21.6■■□□□ 1.05
FXN-203ENST00000396366 PLA2G6O60733 806 aa21.6■■□□□ 1.05
FXN-203ENST00000396366 RARBP10826 455 aa21.6■■□□□ 1.05
FXN-203ENST00000396366 TOP1P11387 765 aaKnown RBP21.6■■□□□ 1.05
FXN-203ENST00000396366 MFAP1P55081 439 aaKnown RBP21.6■■□□□ 1.05
FXN-203ENST00000396366 CCDC96Q2M329 555 aa21.6■■□□□ 1.05
FXN-203ENST00000396366 MAMDC4Q6UXC1 1216 aa21.6■■□□□ 1.05
FXN-203ENST00000396366 SLC39A5Q6ZMH5 540 aa21.6■■□□□ 1.05
FXN-203ENST00000396366 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.6■■□□□ 1.05
FXN-203ENST00000396366 IL25Q9H293 177 aa21.6■■□□□ 1.05
FXN-203ENST00000396366 XPNPEP3Q9NQH7 507 aa21.6■■□□□ 1.05
FXN-203ENST00000396366 FBXO40Q9UH90 709 aa21.6■■□□□ 1.05
FXN-203ENST00000396366 CNPY2Q9Y2B0 182 aa21.6■■□□□ 1.05
FXN-203ENST00000396366 MCM3APO60318 1980 aa21.59■■□□□ 1.05
FXN-203ENST00000396366 FRMPD2Q68DX3 1309 aaPredicted RBP21.59■■□□□ 1.05
FXN-203ENST00000396366 FDX1P10109 184 aa21.59■■□□□ 1.05
FXN-203ENST00000396366 ALAS1P13196 640 aa21.59■■□□□ 1.05
FXN-203ENST00000396366 BMP8BP34820 402 aa21.59■■□□□ 1.05
FXN-203ENST00000396366 RTP1P59025 263 aa21.59■■□□□ 1.05
FXN-203ENST00000396366 DCAF4Q8WV16 495 aa21.59■■□□□ 1.05
FXN-203ENST00000396366 TRERF1Q96PN7 1200 aa21.59■■□□□ 1.05
FXN-203ENST00000396366 ZKSCAN3Q9BRR0 538 aa21.59■■□□□ 1.05
FXN-203ENST00000396366 ACAD9Q9H845 621 aa21.59■■□□□ 1.05
FXN-203ENST00000396366 GPCPD1Q9NPB8 672 aa21.59■■□□□ 1.05
FXN-203ENST00000396366 RNF146Q9NTX7 359 aa21.59■■□□□ 1.05
FXN-203ENST00000396366 ZHX1Q9UKY1 873 aaPredicted RBP21.59■■□□□ 1.05
FXN-203ENST00000396366 LAMA3Q16787 3333 aa21.59■■□□□ 1.05
FXN-203ENST00000396366 SYNGAP1Q96PV0 1343 aa21.58■■□□□ 1.05
FXN-203ENST00000396366 ZNF213O14771 459 aa21.58■■□□□ 1.05
FXN-203ENST00000396366 AKR1A1P14550 325 aa21.58■■□□□ 1.05
FXN-203ENST00000396366 GSPT1P15170 499 aaKnown RBP21.58■■□□□ 1.05
FXN-203ENST00000396366 MDM2Q00987 491 aaPredicted RBP21.58■■□□□ 1.05
FXN-203ENST00000396366 MUM1L1Q5H9M0 696 aa21.58■■□□□ 1.05
FXN-203ENST00000396366 ZNF467Q7Z7K2 595 aaPredicted RBP21.58■■□□□ 1.05
FXN-203ENST00000396366 MSL3Q8N5Y2 521 aaKnown RBP21.58■■□□□ 1.05
FXN-203ENST00000396366 A1CFQ9NQ94 594 aaKnown RBP21.58■■□□□ 1.05
FXN-203ENST00000396366 ATP11BQ9Y2G3 1177 aa21.58■■□□□ 1.05
FXN-203ENST00000396366 DDX49Q9Y6V7 483 aaKnown RBP21.58■■□□□ 1.05
FXN-203ENST00000396366 SOWAHBA6NEL2 793 aa21.57■■□□□ 1.04
FXN-203ENST00000396366 IRX5P78411 483 aaPredicted RBP21.57■■□□□ 1.04
FXN-203ENST00000396366 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.57■■□□□ 1.04
FXN-203ENST00000396366 A0A1W2PPC1 479 aa21.56■■□□□ 1.04
FXN-203ENST00000396366 HIP1O00291 1037 aa21.56■■□□□ 1.04
FXN-203ENST00000396366 ADCY6O43306 1168 aa21.56■■□□□ 1.04
FXN-203ENST00000396366 ACVR2BQ13705 512 aa21.56■■□□□ 1.04
FXN-203ENST00000396366 TTC22Q5TAA0 569 aa21.56■■□□□ 1.04
FXN-203ENST00000396366 CCDC144CPQ8IYA2 1237 aa21.56■■□□□ 1.04
FXN-203ENST00000396366 FAM133AQ8N9E0 248 aa21.56■■□□□ 1.04
FXN-203ENST00000396366 LRCH3Q96II8 777 aa21.56■■□□□ 1.04
FXN-203ENST00000396366 PURBQ96QR8 312 aaKnown RBP21.56■■□□□ 1.04
FXN-203ENST00000396366 UBE2OQ9C0C9 1292 aaKnown RBP21.56■■□□□ 1.04
FXN-203ENST00000396366 FAM184BQ9ULE4 1060 aa21.56■■□□□ 1.04
FXN-203ENST00000396366 PHF24Q9UPV7 400 aa21.56■■□□□ 1.04
FXN-203ENST00000396366 LAMA4Q16363 1823 aa21.55■■□□□ 1.04
FXN-203ENST00000396366 POTEB2H3BUK9 544 aa21.55■■□□□ 1.04
FXN-203ENST00000396366 ADAMTS4O75173 837 aa21.55■■□□□ 1.04
FXN-203ENST00000396366 PDHBP11177 359 aa21.55■■□□□ 1.04
FXN-203ENST00000396366 PCP11498 1178 aaKnown RBP21.55■■□□□ 1.04
FXN-203ENST00000396366 TRIM60Q495X7 471 aa21.55■■□□□ 1.04
FXN-203ENST00000396366 BTNL9Q6UXG8 535 aa21.55■■□□□ 1.04
FXN-203ENST00000396366 ARMCX2Q7L311 632 aa21.55■■□□□ 1.04
FXN-203ENST00000396366 RNF180Q86T96 592 aa21.55■■□□□ 1.04
FXN-203ENST00000396366 ESR2Q92731 530 aa21.55■■□□□ 1.04
FXN-203ENST00000396366 TTC14Q96N46 770 aa21.55■■□□□ 1.04
FXN-203ENST00000396366 RANBP17Q9H2T7 1088 aaKnown RBP21.55■■□□□ 1.04
FXN-203ENST00000396366 RNF41Q9H4P4 317 aaPredicted RBP21.55■■□□□ 1.04
FXN-203ENST00000396366 CCPG1Q9ULG6 757 aa21.55■■□□□ 1.04
FXN-203ENST00000396366 ASTN1O14525 1302 aa21.55■■□□□ 1.04
FXN-203ENST00000396366 MYADML2A6NDP7 307 aa21.54■■□□□ 1.04
FXN-203ENST00000396366 KDM4AO75164 1064 aa21.54■■□□□ 1.04
FXN-203ENST00000396366 SNX17Q15036 470 aa21.54■■□□□ 1.04
FXN-203ENST00000396366 TKFCQ3LXA3 575 aa21.54■■□□□ 1.04
FXN-203ENST00000396366 CCDC144BQ3MJ40 725 aa21.54■■□□□ 1.04
FXN-203ENST00000396366 SYDE2Q5VT97 1194 aa21.54■■□□□ 1.04
FXN-203ENST00000396366 DSCC1Q9BVC3 393 aa21.54■■□□□ 1.04
FXN-203ENST00000396366 KATNBL1Q9H079 304 aa21.54■■□□□ 1.04
FXN-203ENST00000396366 SYNRGQ9UMZ2 1314 aa21.54■■□□□ 1.04
FXN-203ENST00000396366 B4E1Z4 1266 aa21.53■■□□□ 1.04
FXN-203ENST00000396366 ICAM1P05362 532 aa21.53■■□□□ 1.04
FXN-203ENST00000396366 CPVLQ9H3G5 476 aa21.53■■□□□ 1.04
FXN-203ENST00000396366 ABHD16BQ9H3Z7 469 aa21.53■■□□□ 1.04
FXN-203ENST00000396366 A0A1W2PQ45 241 aaPredicted RBP21.52■■□□□ 1.04
FXN-203ENST00000396366 A0A1W2PQY0 241 aa21.52■■□□□ 1.04
FXN-203ENST00000396366 GOLGA8HP0CJ92 632 aa21.52■■□□□ 1.04
FXN-203ENST00000396366 ZNF543Q08ER8 600 aa21.52■■□□□ 1.04
FXN-203ENST00000396366 NSMFQ6X4W1 530 aa21.52■■□□□ 1.04
FXN-203ENST00000396366 SH3RF1Q7Z6J0 888 aa21.52■■□□□ 1.04
FXN-203ENST00000396366 KLHDC9Q8NEP7 349 aa21.52■■□□□ 1.04
FXN-203ENST00000396366 PRDM5Q9NQX1 630 aaPredicted RBP21.52■■□□□ 1.04
FXN-203ENST00000396366 CYP39A1Q9NYL5 469 aa21.52■■□□□ 1.04
FXN-203ENST00000396366 ZSWIM5Q9P217 1185 aa21.52■■□□□ 1.04
FXN-203ENST00000396366 LCTP09848 1927 aa21.51■■□□□ 1.03
FXN-203ENST00000396366 DUSP11O75319 330 aaKnown RBP21.51■■□□□ 1.03
FXN-203ENST00000396366 SNHG28P0DPA3 235 aa21.51■■□□□ 1.03
FXN-203ENST00000396366 ACLYP53396 1101 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms